The Pontastacus leptodactylus (Astacidae) Repeatome Provides Insight Into Genome Evolution and Reveals Remarkable Diversity of Satellite DNA
出版年份 2021 全文链接
标题
The Pontastacus leptodactylus (Astacidae) Repeatome Provides Insight Into Genome Evolution and Reveals Remarkable Diversity of Satellite DNA
作者
关键词
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出版物
Frontiers in Genetics
Volume 11, Issue -, Pages -
出版商
Frontiers Media SA
发表日期
2021-01-21
DOI
10.3389/fgene.2020.611745
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注意:仅列出部分参考文献,下载原文获取全部文献信息。- Improved genomic resources for the black tiger prawn (Penaeus monodon)
- (2020) Dong Van Quyen et al. Marine Genomics
- A Giant Genome for a Giant Crayfish (Cherax quadricarinatus) With Insights Into cox1 Pseudogenes in Decapod Genomes
- (2020) Mun Hua Tan et al. Frontiers in Genetics
- Molecular Cytogenetic Analysis in Freshwater Prawns of the Genus Macrobrachium (Crustacea: Decapoda: Palaemonidae)
- (2020) Wagner F. Molina et al. INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES
- Global analysis of repetitive DNA from unassembled sequence reads using RepeatExplorer2
- (2020) Petr Novák et al. Nature Protocols
- Penaeid shrimp genome provides insights into benthic adaptation and frequent molting
- (2019) Xiaojun Zhang et al. Nature Communications
- At the Beginning of the End and in the Middle of the Beginning: Structure and Maintenance of Telomeric DNA Repeats and Interstitial Telomeric Sequences
- (2019) Anna Y. Aksenova et al. Genes
- The genetic diversity and differentiation of narrow-clawed crayfish Pontastacus leptodactylus (Eschscholtz, 1823) (Decapoda: Astacidea: Astacidae) in the Caspian Sea Basin, Iran as determined with mitochondrial and microsatellite DNA markers
- (2019) Majidreza Khoshkholgh et al. JOURNAL OF CRUSTACEAN BIOLOGY
- Low coverage sequencing for repetitive DNA analysis in Passiflora edulis Sims: citogenomic characterization of transposable elements and satellite DNA
- (2019) Vanessa Carvalho Cayres Pamponét et al. BMC GENOMICS
- The Repetitive DNA Composition in the Natural Pesticide Producer Tanacetum cinerariifolium: Interindividual Variation of Subtelomeric Tandem Repeats
- (2019) Jelena Mlinarec et al. Frontiers in Plant Science
- Satellitome landscape analysis of Megaleporinus macrocephalus (Teleostei, Anostomidae) reveals intense accumulation of satellite sequences on the heteromorphic sex chromosome
- (2019) Ricardo Utsunomia et al. Scientific Reports
- Comparative mitogenomics of the Decapoda reveals evolutionary heterogeneity in architecture and composition
- (2019) Mun Hua Tan et al. Scientific Reports
- Linking karyotypes with DNA barcodes: proposal for a new standard in chromosomal analysis with an example based on the study of Neotropical Nymphalidae (Lepidoptera)
- (2019) Vladimir A. Lukhtanov et al. Comparative Cytogenetics
- Comparative Analysis of Repetitive DNA between the Main Vectors of Chagas Disease: Triatoma infestans and Rhodnius prolixus
- (2018) Sebastián Pita et al. INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES
- The annotation of repetitive elements in the genome of channel catfish (Ictalurus punctatus)
- (2018) Zihao Yuan et al. PLoS One
- Satellite DNA in Vicia faba is characterized by remarkable diversity in its sequence composition, association with centromeres, and replication timing
- (2018) Laura Ávila Robledillo et al. Scientific Reports
- Clonal genome evolution and rapid invasive spread of the marbled crayfish
- (2018) Julian Gutekunst et al. Nature Ecology & Evolution
- Characterization of the satellitome in lower vascular plants: the case of the endangered fern Vandenboschia speciosa
- (2018) F J Ruiz-Ruano et al. ANNALS OF BOTANY
- Comparative cytogenetic analysis of marine Palaemon species reveals a X1X1X2X2/X1X2Y sex chromosome system in Palaemon elegans
- (2017) Zeltia Torrecilla et al. Frontiers in Zoology
- An updated classification of the freshwater crayfishes (Decapoda: Astacidea) of the world, with a complete species list
- (2017) Keith A Crandall et al. JOURNAL OF CRUSTACEAN BIOLOGY
- DnaSP 6: DNA Sequence Polymorphism Analysis of Large Data Sets
- (2017) Julio Rozas et al. MOLECULAR BIOLOGY AND EVOLUTION
- TAREAN: a computational tool for identification and characterization of satellite DNA from unassembled short reads
- (2017) Petr Novák et al. NUCLEIC ACIDS RESEARCH
- Satellite DNA: An Evolving Topic
- (2017) Manuel Garrido-Ramos Genes
- Regular higher order repeat structures in beetleTribolium castaneumgenome
- (2016) Ines Vlahović et al. Genome Biology and Evolution
- REPdenovo: Inferring De Novo Repeat Motifs from Short Sequence Reads
- (2016) Chong Chu et al. PLoS One
- Karyotype differentiation in 19 species of river loach fishes (Nemacheilidae, Teleostei): extensive variability associated with rDNA and heterochromatin distribution and its phylogenetic and ecological interpretation
- (2015) Alexandr Sember et al. BMC EVOLUTIONARY BIOLOGY
- Ribosomal DNA clusters and telomeric (TTAGG)n repeats in blue butterflies (Lepidoptera, Lycaenidae) with low and high chromosome numbers
- (2015) Alisa O. Vershinina et al. Comparative Cytogenetics
- Satellite DNA in Plants: More than Just Rubbish
- (2015) Manuel A. Garrido-Ramos CYTOGENETIC AND GENOME RESEARCH
- The parthenogenetic Marmorkrebs (Malacostraca: Decapoda: Cambaridae) is a triploid organism
- (2015) Peer Martin et al. JOURNAL OF ZOOLOGICAL SYSTEMATICS AND EVOLUTIONARY RESEARCH
- Sequence Features and Transcriptional Stalling within Centromere DNA Promote Establishment of CENP-A Chromatin
- (2015) Sandra Catania et al. PLoS Genetics
- Differential amplification of satellite PaB6 in chromosomally hypervariable Prospero autumnale complex (Hyacinthaceae)
- (2014) Khatere Emadzade et al. ANNALS OF BOTANY
- Centromere identity from the DNA point of view
- (2014) Miroslav Plohl et al. CHROMOSOMA
- Population structure and genetic analysis of narrow-clawed crayfish (Astacus leptodactylus) populations in Turkey
- (2014) Suleyman Akhan et al. GENETICA
- Origin and distribution of AT-rich repetitive DNA families in Triatoma infestans (Heteroptera)
- (2014) Vanessa Bellini Bardella et al. INFECTION GENETICS AND EVOLUTION
- Two distinct evolutionary lineages of the Astacus leptodactylus species-complex (Decapoda : Astacidae) inferred by phylogenetic analyses
- (2014) Ivana Maguire et al. INVERTEBRATE SYSTEMATICS
- Karyotype, ribosomal genes, and telomeric sequences in the crayfish Procambarus clarkii (Decapoda: Cambaridae)
- (2014) Susanna Salvadori et al. JOURNAL OF CRUSTACEAN BIOLOGY
- Continental-wide distribution of crayfish species in Europe: update and maps
- (2014) A. Kouba et al. Knowledge and Management of Aquatic Ecosystems
- Correlated variation and population differentiation in satellite DNA abundance among lines ofDrosophila melanogaster
- (2014) Kevin H.-C. Wei et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Mitotic karyotype of the tropical freshwater crayfish Procambarus (Austrocambarus) llamasi (Decapoda: Cambaridae)
- (2014) Jeane R. Indy et al. REVISTA DE BIOLOGIA TROPICAL
- The Emergence of Lobsters: Phylogenetic Relationships, Morphological Evolution and Divergence Time Comparisons of an Ancient Group (Decapoda: Achelata, Astacidea, Glypheidea, Polychelida)
- (2014) Heather D. Bracken-Grissom et al. SYSTEMATIC BIOLOGY
- RepeatExplorer: a Galaxy-based web server for genome-wide characterization of eukaryotic repetitive elements from next-generation sequence reads
- (2013) P. Novak et al. BIOINFORMATICS
- Introgressive hybridization as a promoter of genome reshuffling in natural homoploid fish hybrids (Cyprinidae, Leuciscinae)
- (2013) C S A Pereira et al. HEREDITY
- Karyological analysis of the shrimp Palaemon serratus (Decapoda: Palaemonidae)
- (2013) Ana M. González-Tizón et al. JOURNAL OF CRUSTACEAN BIOLOGY
- MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability
- (2013) K. Katoh et al. MOLECULAR BIOLOGY AND EVOLUTION
- Comparative analysis of tandem repeats from hundreds of species reveals unique insights into centromere evolution
- (2013) Daniël P Melters et al. GENOME BIOLOGY
- CD-HIT: accelerated for clustering the next-generation sequencing data
- (2012) Limin Fu et al. BIOINFORMATICS
- Comparative cytogenetics in four species of Palinuridae: B chromosomes, ribosomal genes and telomeric sequences
- (2012) Susanna Salvadori et al. GENETICA
- NIH Image to ImageJ: 25 years of image analysis
- (2012) Caroline A Schneider et al. NATURE METHODS
- The holocentric speciesLuzula elegansshows interplay between centromere and large-scale genome organization
- (2012) Stefan Heckmann et al. PLANT JOURNAL
- Comparative analyses of Astacus leptodactylus morphological characteristics from Croatia and Armenia
- (2011) Ivana Maguire et al. BIOLOGIA
- Comparative Karyotype Investigations in the European Crayfish Astacus astacus and A. leptodactylus (Decapoda, Astacidae)
- (2011) J. Mlinarec et al. CRUSTACEANA
- Chromosomal aberrations involving telomeres and interstitial telomeric sequences
- (2011) A. D. Bolzan MUTAGENESIS
- Correction: Next Generation Sequencing-Based Analysis of Repetitive DNA in the Model Dioceous Plant Silene latifolia
- (2011) JiÅÃ Macas et al. PLoS One
- Graph-based clustering and characterization of repetitive sequences in next-generation sequencing data
- (2010) Petr Novák et al. BMC BIOINFORMATICS
- Karyological Analyses on the Australian Crayfish Cherax destructor (Decapoda: Parastacidae)
- (2010) Massimiliano Scalici et al. JOURNAL OF CRUSTACEAN BIOLOGY
- A review of the ever increasing threat to European crayfish from non-indigenous crayfish species
- (2010) D.M. Holdich et al. Knowledge and Management of Aquatic Ecosystems
- Centromere identity: a challenge to be faced
- (2010) Gunjan D. Mehta et al. MOLECULAR GENETICS AND GENOMICS
- A role for recombination in centromere function
- (2010) Ramsay J. McFarlane et al. TRENDS IN GENETICS
- Jalview Version 2--a multiple sequence alignment editor and analysis workbench
- (2009) A. M. Waterhouse et al. BIOINFORMATICS
- Molecular structure and chromosome distribution of three repetitive DNA families in Anemone hortensis L. (Ranunculaceae)
- (2009) Jelena Mlinarec et al. CHROMOSOME RESEARCH
- Telomeric repeats far from the ends: mechanisms of origin and role in evolution
- (2009) A. Ruiz-Herrera et al. CYTOGENETIC AND GENOME RESEARCH
- Evolutionary dynamics of rDNA clusters on chromosomes of moths and butterflies (Lepidoptera)
- (2009) Petr Nguyen et al. GENETICA
- An overview of plant centromeres
- (2009) Guixiang Wang et al. Journal of Genetics and Genomics
- Satellite DNA in insects: a review
- (2008) T Palomeque et al. HEREDITY
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