The BMP signaling gradient is interpreted through concentration thresholds in dorsal–ventral axial patterning

Proteolytic Restriction of Chordin Range Underlies BMP Gradient Formation

(2020) Francesca B. Tuazon et al.   Cell Reports

Rapid changes in morphogen concentration control self-organized patterning in human embryonic stem cells

(2019) Idse Heemskerk et al.   eLife

Pioneer and repressive functions of p63 during zebrafish embryonic ectoderm specification

(2019) José M. Santos-Pereira et al.   Nature Communications

Single-cell reconstruction of developmental trajectories during zebrafish embryogenesis

(2018) Jeffrey A. Farrell et al.   SCIENCE

PANTHER version 14: more genomes, a new PANTHER GO-slim and improvements in enrichment analysis tools

(2018) Huaiyu Mi et al.   NUCLEIC ACIDS RESEARCH

Systems glycomics of adult zebrafish identifies organ-specific sialylation and glycosylation patterns

(2018) Nao Yamakawa et al.   Nature Communications

TGF-β Family Signaling in Early Vertebrate Development

(2017) Joseph Zinski et al.   Cold Spring Harbor Perspectives in Biology

Decoding temporal interpretation of the morphogen Bicoid in the early Drosophila embryo

(2017) Anqi Huang et al.   eLife

Concentration dependent chromatin states induced by the bicoid morphogen gradient

(2017) Colleen E Hannon et al.   eLife

Systems biology derived source-sink mechanism of BMP gradient formation

(2017) Joseph Zinski et al.   eLife

BMPs direct sensory interneuron identity in the developing spinal cord using signal-specific not morphogenic activities

(2017) Madeline G Andrews et al.   eLife

Dynamics of BMP signaling and distribution during zebrafish dorsal-ventral patterning

(2017) Autumn P Pomreinke et al.   eLife

Morphogen interpretation: concentration, time, competence, and signaling dynamics

(2017) Andreas Sagner et al.   Wiley Interdisciplinary Reviews-Developmental Biology

Regulation of the BMP Signaling-Responsive Transcriptional Network in the Drosophila Embryo

(2016) Lisa Deignan et al.   PLoS Genetics

BMP4 acts as a dorsal telencephalic morphogen in a mouse embryonic stem cell culture system

(2016) Momoko Watanabe et al.   Biology Open

Morphogen rules: design principles of gradient-mediated embryo patterning

(2015) J. Briscoe et al.   DEVELOPMENT

Spatial reconstruction of single-cell gene expression data

(2015) Rahul Satija et al.   NATURE BIOTECHNOLOGY

BMP gradients: A paradigm for morphogen-mediated developmental patterning

(2015) E. Bier et al.   SCIENCE

Temporally coordinated signals progressively pattern the anteroposterior and dorsoventral body axes

(2015) Francesca B. Tuazon et al.   SEMINARS IN CELL & DEVELOPMENTAL BIOLOGY

Response to Nodal morphogen gradient is determined by the kinetics of target gene induction

(2015) Julien Dubrulle et al.   eLife

Angiopoietin-like 3 regulates hepatocyte proliferation and lipid metabolism in zebrafish

(2014) So-Hyun Lee et al.   BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS

Coordination of Patterning and Growth by the Morphogen DPP

(2014) Simon Restrepo et al.   CURRENT BIOLOGY

Nanoscale structure of the BMP antagonist chordin supports cooperative BMP binding

(2014) H. Troilo et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Anteroposterior and dorsoventral patterning are coordinated by an identical patterning clock

(2013) M. Hashiguchi et al.   DEVELOPMENT

Temporal control of BMP signalling determines neuronal subtype identity in the dorsal neural tube

(2013) S. Tozer et al.   DEVELOPMENT

Nanog, Pou5f1 and SoxB1 activate zygotic gene expression during the maternal-to-zygotic transition

(2013) Miler T. Lee et al.   NATURE

Gene Regulatory Logic for Reading the Sonic Hedgehog Signaling Gradient in the Vertebrate Neural Tube

(2012) Nikolaos Balaskas et al.   CELL

Critical Role of the Matricellular Protein SPARC in Mediating Erythroid Progenitor Cell Development in Zebrafish

(2012) Rosa M. Ceinos et al.   CELLS TISSUES ORGANS

A gene network that coordinates preplacodal competence and neural crest specification in zebrafish

(2012) Neha Bhat et al.   DEVELOPMENTAL BIOLOGY

Morphogen Gradients: From Generation to Interpretation

(2011) Katherine W. Rogers et al.   Annual Review of Cell and Developmental Biology

Comparative analysis of RNA-Seq alignment algorithms and the RNA-Seq unified mapper (RUM)

(2011) Gregory R. Grant et al.   BIOINFORMATICS

The Enhancer of split transcription factor Her8a is a novel dimerisation partner for Her3 that controls anterior hindbrain neurogenesis in zebrafish

(2011) Katharine J Webb et al.   BMC DEVELOPMENTAL BIOLOGY

Def6 Is Required for Convergent Extension Movements during Zebrafish Gastrulation Downstream of Wnt5b Signaling

(2011) Katerina Goudevenou et al.   PLoS One

An Intermediate Level of BMP Signaling Directly Specifies Cranial Neural Crest Progenitor Cells in Zebrafish

(2011) Jennifer A. Schumacher et al.   PLoS One

Dynamics of Dpp Signaling and Proliferation Control

(2011) O. Wartlick et al.   SCIENCE

Chromatin signature of embryonic pluripotency is established during genome activation

(2010) Nadine L. Vastenhouw et al.   NATURE

Structure of Smad1 MH1/DNA complex reveals distinctive rearrangements of BMP and TGF-β effectors

(2010) Nithya BabuRajendran et al.   NUCLEIC ACIDS RESEARCH

Carboxypeptidase A6 in Zebrafish Development and Implications for VIth Cranial Nerve Pathfinding

(2010) Peter J. Lyons et al.   PLoS One

Inositol hexakisphosphate kinase-2 acts as an effector of the vertebrate Hedgehog pathway

(2010) B. Sarmah et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Identification of Early Requirements for Preplacodal Ectoderm and Sensory Organ Development

(2010) Hye-Joo Kwon et al.   PLoS Genetics

Finding partners: How BMPs select their targets

(2009) Ira L. Blitz et al.   DEVELOPMENTAL DYNAMICS

Bone morphogenetic protein heterodimers assemble heteromeric type I receptor complexes to pattern the dorsoventral axis

(2009) Shawn C. Little et al.   NATURE CELL BIOLOGY

Morphogen Control of Wing Growth through the Fat Signaling Pathway

(2008) Dragana Rogulja et al.   DEVELOPMENTAL CELL

The BMP Signaling Gradient Patterns Dorsoventral Tissues in a Temporally Progressive Manner along the Anteroposterior Axis

(2008) Jennifer A. Tucker et al.   DEVELOPMENTAL CELL