Evaluation on reprogramed biological processes in transgenic maize varieties using transcriptomics and metabolomics

Combined Proteomics and Metabolism Analysis Unravels Prominent Roles of Antioxidant System in the Prevention of Alfalfa (Medicago sativa L.) against Salt Stress

(2020) Jikai Li et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Three-generation Reproductive Toxicity of Genetically Modified Maize with Cry1Ab and epsps Genes

(2020) Yichun Hu et al.   JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY

iTRAQ-based quantitative proteomic analysis of transgenic and non-transgenic maize seeds

(2020) Weixiao Liu et al.   JOURNAL OF FOOD COMPOSITION AND ANALYSIS

Exogenous salicylic acid treatment induces cold tolerance in wheat through promotion of antioxidant enzyme activity and proline accumulation

(2019) Anna Ignatenko et al.   ACTA PHYSIOLOGIAE PLANTARUM

Unintended effects of transgenic rice revealed by transcriptome and metabolism

(2019) Wei Fu et al.   GM Crops & Food-Biotechnology in Agriculture and the Food Chain

Roles of heat shock protein and reprogramming of photosynthetic carbon metabolism in thermotolerance under elevated CO2 in maize

(2019) Jikai Li et al.   ENVIRONMENTAL AND EXPERIMENTAL BOTANY

Impact of genetically engineered maize on agronomic, environmental and toxicological traits: a meta-analysis of 21 years of field data

(2018) Elisa Pellegrino et al.   Scientific Reports

Ending event-based regulation of GMO crops

(2016) Steven H Strauss et al.   NATURE BIOTECHNOLOGY

An integrated multi-omics analysis of the NK603 Roundup-tolerant GM maize reveals metabolism disturbances caused by the transformation process

(2016) Robin Mesnage et al.   Scientific Reports

Next-generation sequencing as a tool for the molecular characterisation and risk assessment of genetically modified plants: Added value or not?

(2015) Katia Pauwels et al.   TRENDS IN FOOD SCIENCE & TECHNOLOGY

Principal component analysis-based control charts for multivariate nonnormal distributions

(2012) Poovich Phaladiganon et al.   EXPERT SYSTEMS WITH APPLICATIONS

Measurement of mRNA abundance using RNA-seq data: RPKM measure is inconsistent among samples

(2012) Günter P. Wagner et al.   THEORY IN BIOSCIENCES

Impacts of genetically engineered crops on pesticide use in the U.S. -- the first sixteen years

(2012) Charles M Benbrook   Environmental Sciences Europe

KOBAS 2.0: a web server for annotation and identification of enriched pathways and diseases

(2011) Chen Xie et al.   NUCLEIC ACIDS RESEARCH

Differential responses of five cherry tomato varieties to water stress: Changes on phenolic metabolites and related enzymes

(2011) Eva Sánchez-Rodríguez et al.   PHYTOCHEMISTRY

Over-expression of mitochondrial heat shock protein 70 suppresses programmed cell death in rice

(2010) Yaocheng Qi et al.   FEBS LETTERS

Comparison of two GM maize varieties with a near-isogenic non-GM variety using transcriptomics, proteomics and metabolomics

(2010) Eugenia Barros et al.   PLANT BIOTECHNOLOGY JOURNAL

Transcriptome and metabolome profiling of field-grown transgenic barley lack induced differences but show cultivar-specific variances

(2010) K.-H. Kogel et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

RNA-Seq gene expression estimation with read mapping uncertainty

(2009) Bo Li et al.   BIOINFORMATICS

TopHat: discovering splice junctions with RNA-Seq

(2009) Cole Trapnell et al.   BIOINFORMATICS

edgeR: a Bioconductor package for differential expression analysis of digital gene expression data

(2009) M. D. Robinson et al.   BIOINFORMATICS

The development of herbicide-resistant maize: stable Agrobacterium-mediated transformation of maize using explants of type II embryogenic calli

(2009) Hyun A. Kim et al.   Plant Biotechnology Reports

Effect of Transgenes on Global Gene Expression in Soybean Is within the Natural Range of Variation of Conventional Cultivars

(2008) K. C. Cheng et al.   JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY

Microarray analyses reveal that plant mutagenesis may induce more transcriptomic changes than transgene insertion

(2008) R. Batista et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA