Genome Sequencing of Sewage Detects Regionally Prevalent SARS-CoV-2 Variants

An interactive web-based dashboard to track COVID-19 in real time

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SciPy 1.0: fundamental algorithms for scientific computing in Python

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Virological assessment of hospitalized patients with COVID-2019

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Introductions and early spread of SARS-CoV-2 in the New York City area

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Characterisation of the sewage virome: comparison of NGS tools and occurrence of significant pathogens

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Presence of SARS-Coronavirus-2 RNA in Sewage and Correlation with Reported COVID-19 Prevalence in the Early Stage of the Epidemic in The Netherlands

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Evidence for Limited Early Spread of COVID-19 Within the United States, January–February 2020

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Wastewater-Based Epidemiology: Global Collaborative to Maximize Contributions in the Fight Against COVID-19

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Genomic surveillance reveals multiple introductions of SARS-CoV-2 into Northern California

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First confirmed detection of SARS-CoV-2 in untreated wastewater in Australia: A proof of concept for the wastewater surveillance of COVID-19 in the community

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COVID-19 Surveillance in Southeastern Virginia Using Wastewater-Based Epidemiology

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SARS-CoV-2 Titers in Wastewater Are Higher than Expected from Clinically Confirmed Cases

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Community Transmission of Severe Acute Respiratory Syndrome Coronavirus 2 Disproportionately Affects the Latinx Population During Shelter-in-Place in San Francisco

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Coronaviruses in wastewater processes: Source, fate and potential risks

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Cryptic transmission of SARS-CoV-2 in Washington state

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Metagenomics for the study of viruses in urban sewage as a tool for public health surveillance

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Frequent Detection and Genetic Diversity of Human Bocavirus in Urban Sewage Samples

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Sambamba: fast processing of NGS alignment formats

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Identification of Viral Pathogen Diversity in Sewage Sludge by Metagenome Analysis

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Detection of human coronaviruses in simultaneously collected stool samples and nasopharyngeal swabs from hospitalized children with acute gastroenteritis

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High Variety of Known and New RNA and DNA Viruses of Diverse Origins in Untreated Sewage

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Fast gapped-read alignment with Bowtie 2

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Raw Sewage Harbors Diverse Viral Populations

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Frequent Detection of Highly Diverse Variants of Cardiovirus, Cosavirus, Bocavirus, and Circovirus in Sewage Samples Collected in the United States

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