BRENDA, the ELIXIR core data resource in 2021: new developments and updates

The ELIXIR Core Data Resources: fundamental infrastructure for the life sciences

(2020) Rachel Drysdale et al.   BIOINFORMATICS

UniProt: a worldwide hub of protein knowledge

(2018)   NUCLEIC ACIDS RESEARCH

BRENDA in 2019: a European ELIXIR core data resource

(2018) Lisa Jeske et al.   NUCLEIC ACIDS RESEARCH

RCSB Protein Data Bank: biological macromolecular structures enabling research and education in fundamental biology, biomedicine, biotechnology and energy

(2018) Stephen K Burley et al.   NUCLEIC ACIDS RESEARCH

InterPro in 2019: improving coverage, classification and access to protein sequence annotations

(2018) Alex L Mitchell et al.   NUCLEIC ACIDS RESEARCH

SCOPe: Manual Curation and Artifact Removal in the Structural Classification of Proteins – extended Database

(2017) John-Marc Chandonia et al.   JOURNAL OF MOLECULAR BIOLOGY

Database resources of the National Center for Biotechnology Information

(2017) et al.   NUCLEIC ACIDS RESEARCH

The MetaCyc database of metabolic pathways and enzymes

(2017) Ron Caspi et al.   NUCLEIC ACIDS RESEARCH

BrEPS 2.0: Optimization of sequence pattern prediction for enzyme annotation

(2017) Christian-Alexander Dudek et al.   PLoS One

An update on the Enzyme Portal: an integrative approach for exploring enzyme knowledge

(2017) S. Pundir et al.   PROTEIN ENGINEERING DESIGN & SELECTION

BRENDA in 2017: new perspectives and new tools in BRENDA

(2016) Sandra Placzek et al.   NUCLEIC ACIDS RESEARCH

Improvements to PATRIC, the all-bacterial Bioinformatics Database and Analysis Resource Center

(2016) Alice R. Wattam et al.   NUCLEIC ACIDS RESEARCH

KEGG: new perspectives on genomes, pathways, diseases and drugs

(2016) Minoru Kanehisa et al.   NUCLEIC ACIDS RESEARCH

BacDive – The Bacterial Diversity Metadatabase in 2016

(2015) Carola Söhngen et al.   NUCLEIC ACIDS RESEARCH

Reference sequence (RefSeq) database at NCBI: current status, taxonomic expansion, and functional annotation

(2015) Nuala A. O'Leary et al.   NUCLEIC ACIDS RESEARCH

CATH: comprehensive structural and functional annotations for genome sequences

(2014) Ian Sillitoe et al.   NUCLEIC ACIDS RESEARCH

BRENDA in 2015: exciting developments in its 25th year of existence

(2014) Antje Chang et al.   NUCLEIC ACIDS RESEARCH

A metabolite-centric view on flux distributions in genome-scale metabolic models

(2013) S Riemer et al.   BMC Systems Biology

The Gene Ontology (GO) Cellular Component Ontology: integration with SAO (Subcellular Anatomy Ontology) and other recent developments

(2013) Paola Roncaglia et al.   Journal of Biomedical Semantics

BRENDA in 2013: integrated reactions, kinetic data, enzyme function data, improved disease classification: new options and contents in BRENDA

(2012) Ida Schomburg et al.   NUCLEIC ACIDS RESEARCH

Development of a classification scheme for disease-related enzyme information

(2011) Carola Söhngen et al.   BMC BIOINFORMATICS

SABIO-RK--database for biochemical reaction kinetics

(2011) U. Wittig et al.   NUCLEIC ACIDS RESEARCH

The NCBI Taxonomy database

(2011) S. Federhen   NUCLEIC ACIDS RESEARCH

The BRENDA Tissue Ontology (BTO): the first all-integrating ontology of all organisms for enzyme sources

(2010) M. Gremse et al.   NUCLEIC ACIDS RESEARCH

ExplorEnz: the primary source of the IUBMB enzyme list

(2008) A. G. McDonald et al.   NUCLEIC ACIDS RESEARCH

BRENDA, AMENDA and FRENDA the enzyme information system: new content and tools in 2009

(2008) A. Chang et al.   NUCLEIC ACIDS RESEARCH