标题
Splicing at the phase-separated nuclear speckle interface: a model
作者
关键词
-
出版物
NUCLEIC ACIDS RESEARCH
Volume 49, Issue 2, Pages 636-645
出版商
Oxford University Press (OUP)
发表日期
2020-12-04
DOI
10.1093/nar/gkaa1209
参考文献
相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。- Tyramide signal amplification mass spectrometry (TSA-MS) ratio identifies nuclear speckle proteins
- (2020) Joseph Dopie et al. JOURNAL OF CELL BIOLOGY
- Combinatorial Genetics Reveals a Scaling Law for the Effects of Mutations on Splicing
- (2019) Pablo Baeza-Centurion et al. CELL
- Nuclear speckle fusion via long-range directional motion regulates speckle morphology after transcriptional inhibition
- (2019) Jiah Kim et al. JOURNAL OF CELL SCIENCE
- Considerations and Challenges in Studying Liquid-Liquid Phase Separation and Biomolecular Condensates
- (2019) Simon Alberti et al. CELL
- Massively Parallel Assays and Quantitative Sequence–Function Relationships
- (2019) Justin B. Kinney et al. Annual Review of Genomics and Human Genetics
- Nascent Pre-rRNA Sorting via Phase Separation Drives the Assembly of Dense Fibrillar Components in the Human Nucleolus
- (2019) Run-Wen Yao et al. MOLECULAR CELL
- Evaluating phase separation in live cells: diagnosis, caveats, and functional consequences
- (2019) David T. McSwiggen et al. GENES & DEVELOPMENT
- The mechanisms of a mammalian splicing enhancer
- (2018) Andrew M Jobbins et al. NUCLEIC ACIDS RESEARCH
- mRNAs are sorted for export or degradation before passing through nuclear speckles
- (2018) Jing Fan et al. NUCLEIC ACIDS RESEARCH
- RNA buffers the phase separation behavior of prion-like RNA binding proteins
- (2018) Shovamayee Maharana et al. SCIENCE
- mRNA structure determines specificity of a polyQ-driven phase separation
- (2018) Erin M. Langdon et al. SCIENCE
- Emerging Roles for Intermolecular RNA-RNA Interactions in RNP Assemblies
- (2018) Briana Van Treeck et al. CELL
- Intronless mRNAs transit through nuclear speckles to gain export competence
- (2018) Ke Wang et al. JOURNAL OF CELL BIOLOGY
- Decoding a cancer-relevant splicing decision in the RON proto-oncogene using high-throughput mutagenesis
- (2018) Simon Braun et al. Nature Communications
- Nuclear Speckle RNA Binding Proteins Remodel Alternative Splicing and the Non-coding Arabidopsis Transcriptome to Regulate a Cross-Talk Between Auxin and Immune Responses
- (2018) Jérémie Bazin et al. Frontiers in Plant Science
- A Multiplexed Assay for Exon Recognition Reveals that an Unappreciated Fraction of Rare Genetic Variants Cause Large-Effect Splicing Disruptions
- (2018) Rocky Cheung et al. MOLECULAR CELL
- Saturation mutagenesis reveals manifold determinants of exon definition
- (2017) Shengdong Ke et al. GENOME RESEARCH
- Quantitative analysis of multilayer organization of proteins and RNA in nuclear speckles at super resolution
- (2017) Jingyi Fei et al. JOURNAL OF CELL SCIENCE
- Biomolecular condensates: organizers of cellular biochemistry
- (2017) Salman F. Banani et al. NATURE REVIEWS MOLECULAR CELL BIOLOGY
- The chromatin remodeling complex Swi/Snf regulates splicing of meiotic transcripts in Saccharomyces cerevisiae
- (2017) Srivats Venkataramanan et al. NUCLEIC ACIDS RESEARCH
- Intrinsically disordered linkers determine the interplay between phase separation and gelation in multivalent proteins
- (2017) Tyler S Harmon et al. eLife
- Nuclear speckles are detention centers for transcripts containing expanded CAG repeats
- (2016) Martyna O. Urbanek et al. BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR BASIS OF DISEASE
- Phase Transition in Postsynaptic Densities Underlies Formation of Synaptic Complexes and Synaptic Plasticity
- (2016) Menglong Zeng et al. CELL
- ATPase-Modulated Stress Granules Contain a Diverse Proteome and Substructure
- (2016) Saumya Jain et al. CELL
- Compositional Control of Phase-Separated Cellular Bodies
- (2016) Salman F. Banani et al. CELL
- Coexisting Liquid Phases Underlie Nucleolar Subcompartments
- (2016) Marina Feric et al. CELL
- The hnRNP family: insights into their role in health and disease
- (2016) Thomas Geuens et al. HUMAN GENETICS
- The complete local genotype–phenotype landscape for the alternative splicing of a human exon
- (2016) Philippe Julien et al. Nature Communications
- Spatial patterning of P granules by RNA-induced phase separation of the intrinsically-disordered protein MEG-3
- (2016) Jarrett Smith et al. eLife
- Learning the Sequence Determinants of Alternative Splicing from Millions of Random Sequences
- (2015) Alexander B. Rosenberg et al. CELL
- Phase Separation by Low Complexity Domains Promotes Stress Granule Assembly and Drives Pathological Fibrillization
- (2015) Amandine Molliex et al. CELL
- The Silent Sway of Splicing by Synonymous Substitutions
- (2015) William F. Mueller et al. JOURNAL OF BIOLOGICAL CHEMISTRY
- Formation and Maturation of Phase-Separated Liquid Droplets by RNA-Binding Proteins
- (2015) Yuan Lin et al. MOLECULAR CELL
- RNA transcription modulates phase transition-driven nuclear body assembly
- (2015) Joel Berry et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- The disordered P granule protein LAF-1 drives phase separation into droplets with tunable viscosity and dynamics
- (2015) Shana Elbaum-Garfinkle et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Liquid-Liquid Phase Separation in Biology
- (2014) Anthony A. Hyman et al. Annual Review of Cell and Developmental Biology
- HSP70 Transgene Directed Motion to Nuclear Speckles Facilitates Heat Shock Activation
- (2014) Nimish Khanna et al. CURRENT BIOLOGY
- Context-dependent control of alternative splicing by RNA-binding proteins
- (2014) Xiang-Dong Fu et al. NATURE REVIEWS GENETICS
- A day in the life of the spliceosome
- (2014) A. Gregory Matera et al. NATURE REVIEWS MOLECULAR CELL BIOLOGY
- Targeting SR Proteins Improves SMN Expression in Spinal Muscular Atrophy Cells
- (2014) Claribel D. Wee et al. PLoS One
- Dual Specificity Kinase DYRK3 Couples Stress Granule Condensation/Dissolution to mTORC1 Signaling
- (2013) Frank Wippich et al. CELL
- Intragenic epigenetic changes modulate NCAM alternative splicing in neuronal differentiation
- (2013) Ignacio E Schor et al. EMBO JOURNAL
- Cell-free Formation of RNA Granules: Low Complexity Sequence Domains Form Dynamic Fibers within Hydrogels
- (2012) Masato Kato et al. CELL
- Argonaute proteins couple chromatin silencing to alternative splicing
- (2012) Maya Ameyar-Zazoua et al. NATURE STRUCTURAL & MOLECULAR BIOLOGY
- Position-dependent splicing activation and repression by SR and hnRNP proteins rely on common mechanisms
- (2012) S. Erkelenz et al. RNA
- Identification of cis- and trans-acting factors involved in the localization of MALAT-1 noncoding RNA to nuclear speckles
- (2012) R. Miyagawa et al. RNA
- Post-transcriptional spliceosomes are retained in nuclear speckles until splicing completion
- (2012) Cyrille Girard et al. Nature Communications
- Integrative Genome-wide Analysis Reveals Cooperative Regulation of Alternative Splicing by hnRNP Proteins
- (2012) Stephanie C. Huelga et al. Cell Reports
- Evolution of SR protein and hnRNP splicing regulatory factors
- (2011) Anke Busch et al. Wiley Interdisciplinary Reviews-RNA
- G Run-mediated Recognition of Proteolipid Protein and DM20 5′ Splice Sites by U1 Small Nuclear RNA Is Regulated by Context and Proximity to the Splice Site
- (2010) Erming Wang et al. JOURNAL OF BIOLOGICAL CHEMISTRY
- Competing Upstream 5' Splice Sites Enhance the Rate of Proximal Splicing
- (2010) M. J. Hicks et al. MOLECULAR AND CELLULAR BIOLOGY
- The Nuclear-Retained Noncoding RNA MALAT1 Regulates Alternative Splicing by Modulating SR Splicing Factor Phosphorylation
- (2010) Vidisha Tripathi et al. MOLECULAR CELL
- Alternative splicing and evolution: diversification, exon definition and function
- (2010) Hadas Keren et al. NATURE REVIEWS GENETICS
- Structural basis of G-tract recognition and encaging by hnRNP F quasi-RRMs
- (2010) Cyril Dominguez et al. NATURE STRUCTURAL & MOLECULAR BIOLOGY
- Regulation of Alternative Splicing by Histone Modifications
- (2010) R. F. Luco et al. SCIENCE
- Nuclear Speckles
- (2010) D. L. Spector et al. Cold Spring Harbor Perspectives in Biology
- The Nucleolus
- (2010) T. Pederson Cold Spring Harbor Perspectives in Biology
- A role for TREX components in the release of spliced mRNA from nuclear speckle domains
- (2010) Anusha P. Dias et al. Nature Communications
- The Spliceosome: Design Principles of a Dynamic RNP Machine
- (2009) Markus C. Wahl et al. CELL
- Cajal’s contribution to the knowledge of the neuronal cell nucleus
- (2009) Miguel Lafarga et al. CHROMOSOMA
- hnRNP M interacts with PSF and p54nrb and co-localizes within defined nuclear structures
- (2009) Marija Marko et al. EXPERIMENTAL CELL RESEARCH
- Biased Chromatin Signatures around Polyadenylation Sites and Exons
- (2009) Noah Spies et al. MOLECULAR CELL
- Engineering splicing factors with designed specificities
- (2009) Yang Wang et al. NATURE METHODS
- Chromatin organization marks exon-intron structure
- (2009) Schraga Schwartz et al. NATURE STRUCTURAL & MOLECULAR BIOLOGY
- Germline P Granules Are Liquid Droplets That Localize by Controlled Dissolution/Condensation
- (2009) C. P. Brangwynne et al. SCIENCE
- The SR protein family
- (2009) Peter J Shepard et al. GENOME BIOLOGY
- Association between active genes occurs at nuclear speckles and is modulated by chromatin environment
- (2008) Jill M. Brown et al. JOURNAL OF CELL BIOLOGY
- Splicing regulation: From a parts list of regulatory elements to an integrated splicing code
- (2008) Z. Wang et al. RNA
- The dynamics of pre-mRNAs and poly(A)+ RNA at speckles in living cells revealed by iFRAP studies
- (2007) Yo Ishihama et al. EXPERIMENTAL CELL RESEARCH
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