Global insights into high temperature and drought stress regulated genes by RNA-Seq in economically important oilseed crop Brassica juncea

De novo assembly of red clover transcriptome based on RNA-Seq data provides insight into drought response, gene discovery and marker identification

(2014) Steven A Yates et al.   BMC GENOMICS

RNA-seq based SNPs for mapping in Brassica juncea (AABB): synteny analysis between the two constituent genomes A (from B. rapa) and B (from B. nigra) shows highly divergent gene block arrangement and unique block fragmentation patterns

(2014) Kumar Paritosh et al.   BMC GENOMICS

De novo sequencing, assembly, and analysis of the Taxodium‘Zhongshansa’ roots and shoots transcriptome in response to short-term waterlogging

(2014) Baiyan Qi et al.   BMC PLANT BIOLOGY

Transgenic Pearl Millet Male Fertility Restorer Line (ICMP451) and Hybrid (ICMH451) Expressing Brassica juncea Nonexpressor of Pathogenesis Related Genes 1 (BjNPR1) Exhibit Resistance to Downy Mildew Disease

(2014) Ramadevi Ramineni et al.   PLoS One

De Novo Transcriptome Assembly and Comparative Analysis of Differentially Expressed Genes in Prunus dulcis Mill. in Response to Freezing Stress

(2014) Sadegh Mousavi et al.   PLoS One

The Transcriptome of Brassica napus L. Roots under Waterlogging at the Seedling Stage

(2013) Xiling Zou et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Emerging roles of microRNAs in the mediation of drought stress response in plants

(2013) Yanfei Ding et al.   JOURNAL OF EXPERIMENTAL BOTANY

Targeted silencing ofBjMYB28transcription factor gene directs development of low glucosinolate lines in oilseedBrassica juncea

(2013) Rehna Augustine et al.   PLANT BIOTECHNOLOGY JOURNAL

Regulation of biotic and abiotic stress responses by plant hormones

(2013) Prakash P. Kumar   PLANT CELL REPORTS

De Novo Transcriptome of Brassica juncea Seed Coat and Identification of Genes for the Biosynthesis of Flavonoids

(2013) Xianjun Liu et al.   PLoS One

Thiourea, a ROS Scavenger, Regulates Source-to-Sink Relationship to Enhance Crop Yield and Oil Content in Brassica juncea (L.)

(2013) Manish Pandey et al.   PLoS One

Hormonal cross-talk in plant development and stress responses

(2013) Sergi Munné-Bosch et al.   Frontiers in Plant Science

Optimization of de novo transcriptome assembly from high-throughput short read sequencing data improves functional annotation for non-model organisms

(2012) Berat Z Haznedaroglu et al.   BMC BIOINFORMATICS

Transcriptome analysis of stem development in the tumourous stem mustard Brassica juncea var. tumida Tsen et Lee by RNA sequencing

(2012) Quan Sun et al.   BMC PLANT BIOLOGY

NGS QC Toolkit: A Toolkit for Quality Control of Next Generation Sequencing Data

(2012) Ravi K. Patel et al.   PLoS One

The Effects of Seed Size on Hybrids Formed between Oilseed Rape (Brassica napus) and Wild Brown Mustard (B. juncea)

(2012) Yong-bo Liu et al.   PLoS One

Functions of microRNAs in plant stress responses

(2012) Ramanjulu Sunkar et al.   TRENDS IN PLANT SCIENCE

SOAPdenovo2: an empirically improved memory-efficient short-read de novo assembler

(2012) Ruibang Luo et al.   GigaScience

The role of WRKY transcription factors in plant abiotic stresses

(2011) Ligang Chen et al.   Biochimica et Biophysica Acta-Gene Regulatory Mechanisms

The plant heat stress transcription factor (Hsf) family: Structure, function and evolution

(2011) Klaus-Dieter Scharf et al.   Biochimica et Biophysica Acta-Gene Regulatory Mechanisms

Hormone balance and abiotic stress tolerance in crop plants

(2011) Zvi Peleg et al.   CURRENT OPINION IN PLANT BIOLOGY

Role of DREBs in regulation of abiotic stress responses in plants

(2011) C. Lata et al.   JOURNAL OF EXPERIMENTAL BOTANY

Transcriptome Profiling of Dehydration Stress in the Chinese Cabbage (Brassica rapa L. ssp. pekinensis) by Tag Sequencing

(2011) Shuancang Yu et al.   PLANT MOLECULAR BIOLOGY REPORTER

Agricultural biotechnology for crop improvement in a variable climate: hope or hype?

(2011) Rajeev K. Varshney et al.   TRENDS IN PLANT SCIENCE

CD-HIT Suite: a web server for clustering and comparing biological sequences

(2010) Ying Huang et al.   BIOINFORMATICS

Optimization of de novo transcriptome assembly from next-generation sequencing data

(2010) Y. Surget-Groba et al.   GENOME RESEARCH

Proteome analysis of the Albugo candida–Brassica juncea pathosystem reveals that the timing of the expression of defence-related genes is a crucial determinant of pathogenesis

(2010) Parwinder Kaur et al.   JOURNAL OF EXPERIMENTAL BOTANY

Group 1 and 2 LEA protein expression correlates with a decrease in water stress induced protein aggregation in horsegram during germination and seedling growth

(2010) Gounipalli Veeranagamallaiah et al.   JOURNAL OF PLANT PHYSIOLOGY

Inducing drought tolerance in plants: Recent advances

(2009) M. Ashraf   BIOTECHNOLOGY ADVANCES

Transcriptional Regulatory Networks in Response to Abiotic Stresses in Arabidopsis and Grasses

(2009) K. Nakashima et al.   PLANT PHYSIOLOGY

Plant miRNAs and abiotic stress responses

(2008) Xiao-Yan Lu et al.   BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS