High-throughput physical map anchoring via BAC-pool sequencing

Whole-genome profiling and shotgun sequencing delivers an anchored, gene-decorated, physical map assembly of bread wheat chromosome 6A

(2014) Naser Poursarebani et al.   PLANT JOURNAL

MOSAIK: A Hash-Based Algorithm for Accurate Next-Generation Sequencing Short-Read Mapping

(2014) Wan-Ping Lee et al.   PLoS One

A chromosome-based draft sequence of the hexaploid bread wheat (Triticum aestivum) genome

(2014) et al.   SCIENCE

Mapping nonrecombining regions in barley using multicolor FISH

(2013) M. Karafiátová et al.   CHROMOSOME RESEARCH

Cloning and Characterization of a Critical Regulator for Preharvest Sprouting in Wheat

(2013) S. Liu et al.   GENETICS

The genome jigsaw

(2013) Vivien Marx   NATURE

Reticulate Evolution of the Rye Genome

(2013) M. M. Martis et al.   PLANT CELL

Comparative BAC-based physical mapping ofOryza sativassp.indicavar. 93-11 and evaluation of the two rice reference sequence assemblies

(2013) Yonglong Pan et al.   PLANT JOURNAL

Physical Mapping Integrated with Syntenic Analysis to Characterize the Gene Space of the Long Arm of Wheat Chromosome 1A

(2013) Stuart J. Lucas et al.   PLoS One

A Physical Map of the Short Arm of Wheat Chromosome 1A

(2013) James Breen et al.   PLoS One

A 4-gigabase physical map unlocks the structure and evolution of the complex genome of Aegilops tauschii, the wheat D-genome progenitor

(2013) M.-C. Luo et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Physical mapping resources for large plant genomes: radiation hybrids for wheat D-genome progenitor Aegilops tauschii

(2012) Ajay Kumar et al.   BMC GENOMICS

Integrating cereal genomics to support innovation in the Triticeae

(2012) C. Feuillet et al.   FUNCTIONAL & INTEGRATIVE GENOMICS

Analysis of the bread wheat genome using whole-genome shotgun sequencing

(2012) Rachel Brenchley et al.   NATURE

Genomic Selection in Wheat Breeding using Genotyping-by-Sequencing

(2012) Jesse Poland et al.   Plant Genome

Specific patterns of gene space organisation revealed in wheat by using the combination of barley and wheat genomic resources

(2011) Camille Rustenholz et al.   BMC GENOMICS

Sequence-based physical mapping of complex genomes by whole genome profiling

(2011) J. van Oeveren et al.   GENOME RESEARCH

Unlocking the Barley Genome by Chromosomal and Comparative Genomics

(2011) Klaus F.X. Mayer et al.   PLANT CELL

Next-generation sequencing and syntenic integration of flow-sorted arms of wheat chromosome 4A exposes the chromosome structure and gene content

(2011) Pilar Hernandez et al.   PLANT JOURNAL

A 3,000-Loci Transcription Map of Chromosome 3B Unravels the Structural and Functional Features of Gene Islands in Hexaploid Wheat

(2011) C. Rustenholz et al.   PLANT PHYSIOLOGY

A Large Maize (Zea mays L.) SNP Genotyping Array: Development and Germplasm Genotyping, and Genetic Mapping to Compare with the B73 Reference Genome

(2011) Martin W. Ganal et al.   PLoS One

LTC: a novel algorithm to improve the efficiency of contig assembly for physical mapping in complex genomes

(2010) Zeev Frenkel et al.   BMC BIOINFORMATICS

A simple, high throughput method to locate single copy sequences from Bacterial Artificial Chromosome (BAC) libraries using High Resolution Melt analysis

(2010) Giang TH Vu et al.   BMC GENOMICS

Development of Chromosome-Specific BAC Resources for Genomics of Bread Wheat

(2010) J. Šafář et al.   CYTOGENETIC AND GENOME RESEARCH

Genome sequencing and analysis of the model grass Brachypodium distachyon

(2010) John P. Vogel et al.   NATURE

Crop genome sequencing: lessons and rationales

(2010) Catherine Feuillet et al.   TRENDS IN PLANT SCIENCE

A high-throughput strategy for screening of bacterial artificial chromosome libraries and anchoring of clones on a genetic map constructed with single nucleotide polymorphisms

(2009) Ming-Cheng Luo et al.   BMC GENOMICS

The Sorghum bicolor genome and the diversification of grasses

(2009) Andrew H. Paterson et al.   NATURE

Gene Content and Virtual Gene Order of Barley Chromosome 1H

(2009) K. F.X. Mayer et al.   PLANT PHYSIOLOGY

Coupling amplified DNA from flow-sorted chromosomes to high-density SNP mapping in barley

(2008) Hana Šimková et al.   BMC GENOMICS