Thermal stress accelerates Arabidopsis thaliana mutation rate

Yeast Spontaneous Mutation Rate and Spectrum Vary with Environment

(2019) Haoxuan Liu et al.   CURRENT BIOLOGY

Elevated mutation and selection in wild emmer wheat in response to 28 years of global warming

(2019) Yong-Bi Fu et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Experimental Evolution of Yeast for High-Temperature Tolerance

(2018) Chih-Jen Huang et al.   MOLECULAR BIOLOGY AND EVOLUTION

Temperature responses of mutation rate and mutational spectrum in an Escherichia coli strain and the correlation with metabolic rate

(2018) Xiao-Lin Chu et al.   BMC EVOLUTIONARY BIOLOGY

Fine-Grained Analysis of Spontaneous Mutation Spectrum and Frequency in Arabidopsis thaliana

(2018) Mao-Lun Weng et al.   GENETICS

Old Trade, New Tricks: Insights into the Spontaneous Mutation Process from the Partnering of Classical Mutation Accumulation Experiments with High-Throughput Genomic Approaches

(2018) Vaishali Katju et al.   Genome Biology and Evolution

Oxidative DNA damage & repair: An introduction

(2017) Jean Cadet et al.   FREE RADICAL BIOLOGY AND MEDICINE

DNA mismatch repair preferentially protects genes from mutation

(2017) Eric J. Belfield et al.   GENOME RESEARCH

Persistent damaged bases in DNA allow mutagenic break repair in Escherichia coli

(2017) Jessica M. Moore et al.   PLoS Genetics

DDM1 and Lsh remodelers allow methylation of DNA wrapped in nucleosomes

(2017) David B Lyons et al.   eLife

Extreme mutation bias and high AT content inPlasmodium falciparum

(2016) William L. Hamilton et al.   NUCLEIC ACIDS RESEARCH

Germline replications and somatic mutation accumulation are independent of vegetative life span inArabidopsis

(2016) J. Matthew Watson et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Multi-nucleotide de novo Mutations in Humans

(2016) Søren Besenbacher et al.   PLoS Genetics

High mutational rates of large-scale duplication and deletion inDaphnia pulex

(2015) Nathan Keith et al.   GENOME RESEARCH

Parent–progeny sequencing indicates higher mutation rates in heterozygotes

(2015) Sihai Yang et al.   NATURE

Differences in genome-wide repeat sequence instability conferred by proofreading and mismatch repair defects

(2015) Scott A. Lujan et al.   NUCLEIC ACIDS RESEARCH

C. eleganswhole-genome sequencing reveals mutational signatures related to carcinogens and DNA repair deficiency

(2014) Bettina Meier et al.   GENOME RESEARCH

Environmentally responsive genome-wide accumulation of de novoArabidopsis thalianamutations and epimutations

(2014) Caifu Jiang et al.   GENOME RESEARCH

Improved nucleosome-positioning algorithm iNPS for accurate nucleosome positioning from sequencing data

(2014) Weizhong Chen et al.   Nature Communications

Impact of plant shoot architecture on leaf cooling: a coupled heat and mass transfer model

(2013) L. J. Bridge et al.   Journal of the Royal Society Interface

High temperature exposure increases plant cooling capacity

(2012) Amanda J. Crawford et al.   CURRENT BIOLOGY

Genome-wide analysis of mutations in mutant lineages selected following fast-neutron irradiation mutagenesis of Arabidopsis thaliana

(2012) E. J. Belfield et al.   GENOME RESEARCH

Dual effect of heat shock on DNA replication and genome integrity

(2012) Artem K. Velichko et al.   MOLECULAR BIOLOGY OF THE CELL

Clustered Mutations in Yeast and in Human Cancers Can Arise from Damaged Long Single-Strand DNA Regions

(2012) Steven A. Roberts et al.   MOLECULAR CELL

Fast gapped-read alignment with Bowtie 2

(2012) Ben Langmead et al.   NATURE METHODS

Nucleosomes Suppress Spontaneous Mutations Base-Specifically in Eukaryotes

(2012) Xiaoshu Chen et al.   SCIENCE

A decade of weather extremes

(2012) Dim Coumou et al.   Nature Climate Change

Regenerant Arabidopsis Lineages Display a Distinct Genome-Wide Spectrum of Mutations Conferring Variant Phenotypes

(2011) Caifu Jiang et al.   CURRENT BIOLOGY

Multiple reference genomes and transcriptomes for Arabidopsis thaliana

(2011) Xiangchao Gan et al.   NATURE

Integrative genomics viewer

(2011) James T Robinson et al.   NATURE BIOTECHNOLOGY

Relationship between nucleosome positioning and DNA methylation

(2010) Ramakrishna K. Chodavarapu et al.   NATURE

Microsatellite Instability in Arabidopsis Increases with Plant Development

(2010) A. Golubov et al.   PLANT PHYSIOLOGY

The Rate and Molecular Spectrum of Spontaneous Mutations in Arabidopsis thaliana

(2010) S. Ossowski et al.   SCIENCE

The Sequence Alignment/Map format and SAMtools

(2009) H. Li et al.   BIOINFORMATICS

Selective epigenetic control of retrotransposition in Arabidopsis

(2009) Marie Mirouze et al.   NATURE

Nucleosome positioning and gene regulation: advances through genomics

(2009) Cizhong Jiang et al.   NATURE REVIEWS GENETICS

Genome-Wide Association of Histone H3 Lysine Nine Methylation with CHG DNA Methylation in Arabidopsis thaliana

(2008) Yana V. Bernatavichute et al.   PLoS One