标题
Histone H3.3G34-Mutant Interneuron Progenitors Co-opt PDGFRA for Gliomagenesis
作者
关键词
-
出版物
CELL
Volume 183, Issue 6, Pages 1617-1633.e22
出版商
Elsevier BV
发表日期
2020-11-30
DOI
10.1016/j.cell.2020.11.012
参考文献
相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。- Chromatin interaction analyses elucidate the roles of PRC2-bound silencers in mouse development
- (2020) Chew Yee Ngan et al. NATURE GENETICS
- Single-Cell Analysis of Foxp1-Driven Mechanisms Essential for Striatal Development
- (2020) Ashley G. Anderson et al. Cell Reports
- Three-dimensional chromatin landscapes in T cell acute lymphoblastic leukemia
- (2020) Andreas Kloetgen et al. NATURE GENETICS
- Single-nucleus transcriptomics of the prefrontal cortex in major depressive disorder implicates oligodendrocyte precursor cells and excitatory neurons
- (2020) Corina Nagy et al. NATURE NEUROSCIENCE
- Single-Cell Analysis of Regional Differences in Adult V-SVZ Neural Stem Cell Lineages
- (2019) Dogukan Mizrak et al. Cell Reports
- Pervasive H3K27 Acetylation Leads to ERV Expression and a Therapeutic Vulnerability in H3K27M Gliomas
- (2019) Brian Krug et al. CANCER CELL
- Childhood cerebellar tumours mirror conserved fetal transcriptional programs
- (2019) Maria C. Vladoiu et al. NATURE
- Single-cell genomics identifies cell type–specific molecular changes in autism
- (2019) Dmitry Velmeshev et al. SCIENCE
- Comprehensive Integration of Single-Cell Data
- (2019) Tim Stuart et al. CELL
- An Integrative Model of Cellular States, Plasticity, and Genetics for Glioblastoma
- (2019) Cyril Neftel et al. CELL
- GenPipes: an open-source framework for distributed and scalable genomic analyses
- (2019) Mathieu Bourgey et al. GigaScience
- Genomic Resolution of DLX-Orchestrated Transcriptional Circuits Driving Development of Forebrain GABAergic Neurons
- (2019) Susan Lindtner et al. Cell Reports
- Recurrent noncoding U1 snRNA mutations drive cryptic splicing in SHH medulloblastoma
- (2019) Hiromichi Suzuki et al. NATURE
- Stalled developmental programs at the root of pediatric brain tumors
- (2019) Selin Jessa et al. NATURE GENETICS
- Myxoid glioneuronal tumor of the septum pellucidum and lateral ventricle is defined by a recurrent PDGFRA p.K385 mutation and DNT-like methylation profile
- (2018) David A. Solomon et al. ACTA NEUROPATHOLOGICA
- Gsx transcription factors control neuronal versus glial specification in ventricular zone progenitors of the mouse lateral ganglionic eminence
- (2018) Heather Chapman et al. DEVELOPMENTAL BIOLOGY
- Integrating single-cell transcriptomic data across different conditions, technologies, and species
- (2018) Andrew Butler et al. NATURE BIOTECHNOLOGY
- Developmental and oncogenic programs in H3K27M gliomas dissected by single-cell RNA-seq
- (2018) Mariella G. Filbin et al. SCIENCE
- Histone H3.3 K27M Accelerates Spontaneous Brainstem Glioma and Drives Restricted Changes in Bivalent Gene Expression
- (2018) Jon D. Larson et al. CANCER CELL
- Neomorphic PDGFRA extracellular domain driver mutations are resistant to PDGFRA targeted therapies
- (2018) Carman K. M. Ip et al. Nature Communications
- Single-cell mRNA quantification and differential analysis with Census
- (2017) Xiaojie Qiu et al. NATURE METHODS
- Reversed graph embedding resolves complex single-cell trajectories
- (2017) Xiaojie Qiu et al. NATURE METHODS
- The Encyclopedia of DNA elements (ENCODE): data portal update
- (2017) Carrie A Davis et al. NUCLEIC ACIDS RESEARCH
- ClinVar: improving access to variant interpretations and supporting evidence
- (2017) Melissa J Landrum et al. NUCLEIC ACIDS RESEARCH
- Spatiotemporal gene expression trajectories reveal developmental hierarchies of the human cortex
- (2017) Tomasz J. Nowakowski et al. SCIENCE
- Decoupling genetics, lineages, and microenvironment in IDH-mutant gliomas by single-cell RNA-seq
- (2017) Andrew S. Venteicher et al. SCIENCE
- Structure of the Full-length VEGFR-1 Extracellular Domain in Complex with VEGF-A
- (2017) Sandra Markovic-Mueller et al. STRUCTURE
- Molecular basis for the role of oncogenic histone mutations in modulating H3K36 methylation
- (2017) Yinglu Zhang et al. Scientific Reports
- New Brain Tumor Entities Emerge from Molecular Classification of CNS-PNETs
- (2016) Dominik Sturm et al. CELL
- Characterizing and targeting PDGFRA alterations in pediatric high-grade glioma
- (2016) Carl Koschmann et al. Oncotarget
- A Functional Switch of NuRD Chromatin Remodeling Complex Subunits Regulates Mouse Cortical Development
- (2016) Justyna Nitarska et al. Cell Reports
- Juicebox Provides a Visualization System for Hi-C Contact Maps with Unlimited Zoom
- (2016) Neva C. Durand et al. Cell Systems
- Histologically distinct neuroepithelial tumors with histone 3 G34 mutation are molecularly similar and comprise a single nosologic entity
- (2015) Andrey Korshunov et al. ACTA NEUROPATHOLOGICA
- VisRseq: R-based visual framework for analysis of sequencing data
- (2015) Hamid Younesy et al. BMC BIOINFORMATICS
- Molecular Identity of Human Outer Radial Glia during Cortical Development
- (2015) Alex A. Pollen et al. CELL
- Highly Parallel Genome-wide Expression Profiling of Individual Cells Using Nanoliter Droplets
- (2015) Evan Z. Macosko et al. CELL
- Insulator dysfunction and oncogene activation in IDH mutant gliomas
- (2015) William A. Flavahan et al. NATURE
- Epigenetic dysregulation: a novel pathway of oncogenesis in pediatric brain tumors
- (2014) Adam M. Fontebasso et al. ACTA NEUROPATHOLOGICA
- Trimmomatic: a flexible trimmer for Illumina sequence data
- (2014) Anthony M. Bolger et al. BIOINFORMATICS
- A 3D Map of the Human Genome at Kilobase Resolution Reveals Principles of Chromatin Looping
- (2014) Suhas S.P. Rao et al. CELL
- RAS/ERK Signaling Controls Proneural Genetic Programs in Cortical Development and Gliomagenesis
- (2014) S. Li et al. JOURNAL OF NEUROSCIENCE
- ZMYND11 links histone H3.3K36me3 to transcription elongation and tumour suppression
- (2014) Hong Wen et al. NATURE
- Integrating mapping-, assembly- and haplotype-based approaches for calling variants in clinical sequencing applications
- (2014) Andy Rimmer et al. NATURE GENETICS
- The genomic landscape of diffuse intrinsic pontine glioma and pediatric non-brainstem high-grade glioma
- (2014) Gang Wu et al. NATURE GENETICS
- Recurrent somatic mutations in ACVR1 in pediatric midline high-grade astrocytoma
- (2014) Adam M Fontebasso et al. NATURE GENETICS
- Mutations in SETD2 and genes affecting histone H3K36 methylation target hemispheric high-grade gliomas
- (2013) Adam M. Fontebasso et al. ACTA NEUROPATHOLOGICA
- featureCounts: an efficient general purpose program for assigning sequence reads to genomic features
- (2013) Y. Liao et al. BIOINFORMATICS
- GSVA: gene set variation analysis for microarray and RNA-Seq data
- (2013) Sonja Hänzelmann et al. BMC BIOINFORMATICS
- Identification of somatic mutations in cancer through Bayesian-based analysis of sequenced genome pairs
- (2013) Alexis Christoforides et al. BMC GENOMICS
- Novel Oncogenic PDGFRA Mutations in Pediatric High-Grade Gliomas
- (2013) B. S. Paugh et al. CANCER RESEARCH
- A High-Resolution Enhancer Atlas of the Developing Telencephalon
- (2013) Axel Visel et al. CELL
- The homeobox gene Gsx2 controls the timing of oligodendroglial fate specification in mouse lateral ganglionic eminence progenitors
- (2013) H. Chapman et al. DEVELOPMENT
- A smart local moving algorithm for large-scale modularity-based community detection
- (2013) Ludo Waltman et al. EUROPEAN PHYSICAL JOURNAL B
- Gsx2 controls region-specific activation of neural stem cells and injury-induced neurogenesis in the adult subventricular zone
- (2013) A. Lopez-Juarez et al. GENES & DEVELOPMENT
- H3.3 G34R mutations in pediatric primitive neuroectodermal tumors of central nervous system (CNS-PNET) and pediatric glioblastomas: possible diagnostic and therapeutic implications?
- (2013) Marco Gessi et al. JOURNAL OF NEURO-ONCOLOGY
- Sensitive detection of somatic point mutations in impure and heterogeneous cancer samples
- (2013) Kristian Cibulskis et al. NATURE BIOTECHNOLOGY
- Non-epithelial stem cells and cortical interneuron production in the human ganglionic eminences
- (2013) David V Hansen et al. NATURE NEUROSCIENCE
- Subcortical origins of human and monkey neocortical interneurons
- (2013) Tong Ma et al. NATURE NEUROSCIENCE
- Genome engineering using the CRISPR-Cas9 system
- (2013) F Ann Ran et al. Nature Protocols
- An empirical Bayesian framework for somatic mutation detection from cancer genome sequencing data
- (2013) Yuichi Shiraishi et al. NUCLEIC ACIDS RESEARCH
- Inhibition of PRC2 Activity by a Gain-of-Function H3 Mutation Found in Pediatric Glioblastoma
- (2013) P. W. Lewis et al. SCIENCE
- Virmid: accurate detection of somatic mutations with sample impurity inference
- (2013) Sangwoo Kim et al. GENOME BIOLOGY
- Frequent ATRX mutations and loss of expression in adult diffuse astrocytic tumors carrying IDH1/IDH2 and TP53 mutations
- (2012) Xiao-Yang Liu et al. ACTA NEUROPATHOLOGICA
- K27M mutation in histone H3.3 defines clinically and biologically distinct subgroups of pediatric diffuse intrinsic pontine gliomas
- (2012) Dong-Anh Khuong-Quang et al. ACTA NEUROPATHOLOGICA
- Strelka: accurate somatic small-variant calling from sequenced tumor–normal sample pairs
- (2012) Christopher T. Saunders et al. BIOINFORMATICS
- STAR: ultrafast universal RNA-seq aligner
- (2012) Alexander Dobin et al. BIOINFORMATICS
- Integrative Genomics Viewer (IGV): high-performance genomics data visualization and exploration
- (2012) H. Thorvaldsdottir et al. BRIEFINGS IN BIOINFORMATICS
- Hotspot Mutations in H3F3A and IDH1 Define Distinct Epigenetic and Biological Subgroups of Glioblastoma
- (2012) Dominik Sturm et al. CANCER CELL
- VarScan 2: Somatic mutation and copy number alteration discovery in cancer by exome sequencing
- (2012) D. C. Koboldt et al. GENOME RESEARCH
- A method for stable transgenesis of radial glia lineage in rat neocortex by piggyBac mediated transposition
- (2012) Fuyi Chen et al. JOURNAL OF NEUROSCIENCE METHODS
- Driver mutations in histone H3.3 and chromatin remodelling genes in paediatric glioblastoma
- (2012) Jeremy Schwartzentruber et al. NATURE
- Somatic histone H3 alterations in pediatric diffuse intrinsic pontine gliomas and non-brainstem glioblastomas
- (2012) Gang Wu et al. NATURE GENETICS
- Fast gapped-read alignment with Bowtie 2
- (2012) Ben Langmead et al. NATURE METHODS
- SomaticSniper: identification of somatic point mutations in whole genome sequencing data
- (2011) David E. Larson et al. BIOINFORMATICS
- Histone Methylation by PRC2 Is Inhibited by Active Chromatin Marks
- (2011) Frank W. Schmitges et al. MOLECULAR CELL
- Integrative genomics viewer
- (2011) James T Robinson et al. NATURE BIOTECHNOLOGY
- A framework for variation discovery and genotyping using next-generation DNA sequencing data
- (2011) Mark A DePristo et al. NATURE GENETICS
- Genome-wide histone acetylation data improve prediction of mammalian transcription factor binding sites
- (2010) Stephen A. Ramsey et al. BIOINFORMATICS
- BEDTools: a flexible suite of utilities for comparing genomic features
- (2010) Aaron R. Quinlan et al. BIOINFORMATICS
- Integrated Genomic Analysis Identifies Clinically Relevant Subtypes of Glioblastoma Characterized by Abnormalities in PDGFRA, IDH1, EGFR, and NF1
- (2010) Roel G.W. Verhaak et al. CANCER CELL
- Simple Combinations of Lineage-Determining Transcription Factors Prime cis-Regulatory Elements Required for Macrophage and B Cell Identities
- (2010) Sven Heinz et al. MOLECULAR CELL
- ANNOVAR: functional annotation of genetic variants from high-throughput sequencing data
- (2010) K. Wang et al. NUCLEIC ACIDS RESEARCH
- Structures of a platelet-derived growth factor/propeptide complex and a platelet-derived growth factor/receptor complex
- (2010) A. Hye-Ryong Shim et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- The Sequence Alignment/Map format and SAMtools
- (2009) H. Li et al. BIOINFORMATICS
- Fast and accurate short read alignment with Burrows-Wheeler transform
- (2009) H. Li et al. BIOINFORMATICS
- Systematic RNA interference reveals that oncogenic KRAS-driven cancers require TBK1
- (2009) David A. Barbie et al. NATURE
- An Integrated Genomic Analysis of Human Glioblastoma Multiforme
- (2008) D. W. Parsons et al. SCIENCE
- Model-based Analysis of ChIP-Seq (MACS)
- (2008) Yong Zhang et al. GENOME BIOLOGY
Find the ideal target journal for your manuscript
Explore over 38,000 international journals covering a vast array of academic fields.
SearchAdd your recorded webinar
Do you already have a recorded webinar? Grow your audience and get more views by easily listing your recording on Peeref.
Upload Now