Comparative genomics in “Candidatus Kuenenia stuttgartiensis” reveal high genomic plasticity in the overall genome structure, CRISPR loci and surface proteins

16S rRNA gene-based primer pair showed high specificity and quantification accuracy in detecting freshwater Brocadiales anammox bacteria

(2020) Chang Ding et al.   FEMS MICROBIOLOGY ECOLOGY

Ecological niche differentiation among anammox bacteria

(2020) Lei Zhang et al.   WATER RESEARCH

Anaerobic ammonium oxidation is a major N-sink in aquifer systems around the world

(2019) Shanyun Wang et al.   ISME Journal

Anaerobic Ammonium Oxidation (Anammox) with Planktonic Cells in a Redox-Stable Semicontinuous Stirred-Tank Reactor

(2018) Chang Ding et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

What is the Best Biological Process for Nitrogen Removal: When and Why?

(2018) Perry L. McCarty   ENVIRONMENTAL SCIENCE & TECHNOLOGY

KBase: The United States Department of Energy Systems Biology Knowledgebase

(2018) Adam P Arkin et al.   NATURE BIOTECHNOLOGY

CRISPRCasFinder, an update of CRISRFinder, includes a portable version, enhanced performance and integrates search for Cas proteins

(2018) David Couvin et al.   NUCLEIC ACIDS RESEARCH

Signaling ammonium across membranes through an ammonium sensor histidine kinase

(2018) Tobias Pflüger et al.   Nature Communications

Resolving the complete genome of Kuenenia stuttgartiensis from a membrane bioreactor enrichment using Single-Molecule Real-Time sequencing

(2018) Jeroen Frank et al.   Scientific Reports

Evidence of differential adaptation to decreased temperature by anammox bacteria

(2018) Ximao Lin et al.   ENVIRONMENTAL MICROBIOLOGY

Trending topics and open questions in anaerobic ammonium oxidation

(2018) Stijn H Peeters et al.   CURRENT OPINION IN CHEMICAL BIOLOGY

Whole-Community Metagenomics in Two Different Anammox Configurations: Process Performance and Community Structure

(2017) Ananda S. Bhattacharjee et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

Membrane-bound electron transport systems of an anammox bacterium: A complexome analysis

(2016) Naomi M. de Almeida et al.   BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS

Characterizing leader sequences of CRISPR loci

(2016) Omer S. Alkhnbashi et al.   BIOINFORMATICS

Suspended sludge and biofilm shaped different anammox communities in two pilot-scale one-stage anammox reactors

(2016) Bingyu Zheng et al.   BIORESOURCE TECHNOLOGY

OrthoANI: An improved algorithm and software for calculating average nucleotide identity

(2016) Imchang Lee et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Characterization of Anammox Hydrazine Dehydrogenase, a Key N2-producing Enzyme in the Global Nitrogen Cycle

(2016) Wouter J. Maalcke et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

MEGA7: Molecular Evolutionary Genetics Analysis Version 7.0 for Bigger Datasets

(2016) Sudhir Kumar et al.   MOLECULAR BIOLOGY AND EVOLUTION

The S-Layer Protein of the Anammox Bacterium Kuenenia stuttgartiensis Is Heavily O-Glycosylated

(2016) Muriel C. F. van Teeseling et al.   Frontiers in Microbiology

The inner workings of the hydrazine synthase multiprotein complex

(2015) Andreas Dietl et al.   NATURE

Prokka: rapid prokaryotic genome annotation

(2014) T. Seemann   BIOINFORMATICS

CRISPR-Cas Systems: Prokaryotes Upgrade to Adaptive Immunity

(2014) Rodolphe Barrangou et al.   MOLECULAR CELL

A New Addition to the Cell Plan of Anammox Bacteria: "Candidatus Kuenenia stuttgartiensis" Has a Protein Surface Layer as the Outermost Layer of the Cell

(2013) M. C. F. van Teeseling et al.   JOURNAL OF BACTERIOLOGY

Systematic Chromosomal Deletion of Bacterial Ribosomal Protein Genes

(2011) Shinichiro Shoji et al.   JOURNAL OF MOLECULAR BIOLOGY

Molecular mechanism of anaerobic ammonium oxidation

(2011) Boran Kartal et al.   NATURE

Prodigal: prokaryotic gene recognition and translation initiation site identification

(2010) Doug Hyatt et al.   BMC BIOINFORMATICS

Transposases are the most abundant, most ubiquitous genes in nature

(2010) Ramy K. Aziz et al.   NUCLEIC ACIDS RESEARCH

progressiveMauve: Multiple Genome Alignment with Gene Gain, Loss and Rearrangement

(2010) Aaron E. Darling et al.   PLoS One

Identification and quantification of anammox bacteria in eight nitrogen removal reactors

(2010) Bao-lan Hu et al.   WATER RESEARCH

Cell division ring, a new cell division protein and vertical inheritance of a bacterial organelle in anammox planctomycetes

(2009) Laura van Niftrik et al.   MOLECULAR MICROBIOLOGY

Large gene overlaps in prokaryotic genomes: result of functional constraints or mispredictions?

(2008) Albert Pallejà et al.   BMC GENOMICS