Salt Marsh Elevation Drives Root Microbial Composition of the Native Invasive Grass Elytrigia atherica

Elucidation of the rhizosphere microbiome linked to Spartina alterniflora phenotype in a salt marsh on Skidaway Island, Georgia, USA

(2020) Max Kolton et al.   FEMS MICROBIOLOGY ECOLOGY

Four decades of soil water stress history together with host genotype constrain the response of the wheat microbiome to soil moisture

(2020) Hamed Azarbad et al.   FEMS MICROBIOLOGY ECOLOGY

Plant–microbiome interactions: from community assembly to plant health

(2020) Pankaj Trivedi et al.   NATURE REVIEWS MICROBIOLOGY

Symbiosis and stress: how plant microbiomes affect host evolution

(2020) Christine V. Hawkes et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

In Nitrate-Rich Soil, Fallopia x bohemica Modifies Functioning of N Cycle Compared to Native Monocultures

(2020) Amélie A. M. Cantarel et al.   Diversity-Basel

Elymus athericus encroachment in Wadden Sea salt marshes is driven by surface‐elevation change

(2019) Stefanie Nolte et al.   APPLIED VEGETATION SCIENCE

Relationships between fungal community composition in decomposing leaf litter and home‐field advantage effects

(2019) G. F. (Ciska) Veen et al.   FUNCTIONAL ECOLOGY

Arbuscular Mycorrhizal Fungi Confer Salt Tolerance in Giant Reed (Arundo donax L.) Plants Grown Under Low Phosphorus by Reducing Leaf Na+ Concentration and Improving Phosphorus Use Efficiency

(2019) Antònia Romero-Munar et al.   Frontiers in Plant Science

Plant distribution along an elevational gradient in a macrotidal salt marsh on the west coast of Korea

(2018) Jeong Hwan Bang et al.   AQUATIC BOTANY

Different Height Forms of Spartina alterniflora Might Select Their Own Rhizospheric Bacterial Communities in Southern Coast of China

(2018) Li’an Lin et al.   MICROBIAL ECOLOGY

Strong associations between plant genotypes and bacterial communities in a natural salt marsh

(2018) Gregory P. Zogg et al.   Ecology and Evolution

Drought Stress and Root-Associated Bacterial Communities

(2018) Dan Naylor et al.   Frontiers in Plant Science

Balances: a New Perspective for Microbiome Analysis

(2018) J. Rivera-Pinto et al.   mSystems

Arbuscular mycorrhizal fungi inoculation mediated changes in rhizosphere bacterial community structure while promoting revegetation in a semiarid ecosystem

(2017) G. Rodríguez-Caballero et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Deblur Rapidly Resolves Single-Nucleotide Community Sequence Patterns

(2017) Amnon Amir et al.   mSystems

Giving back to the community: microbial mechanisms of plant-soil interactions

(2016) Sur Herrera Paredes et al.   FUNCTIONAL ECOLOGY

Decoupling function and taxonomy in the global ocean microbiome

(2016) S. Louca et al.   SCIENCE

Host genotype and age shape the leaf and root microbiomes of a wild perennial plant

(2016) Maggie R. Wagner et al.   Nature Communications

Distribution of Root-Associated Bacterial Communities Along a Salt-Marsh Primary Succession

(2016) Miao Wang et al.   Frontiers in Plant Science

Large herbivores change the direction of interactions within plant communities along a salt marsh stress gradient

(2015) Ruth A. Howison et al.   JOURNAL OF VEGETATION SCIENCE

The Hidden World within Plants: Ecological and Evolutionary Considerations for Defining Functioning of Microbial Endophytes

(2015) Pablo R. Hardoim et al.   MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS

Host Biology in Light of the Microbiome: Ten Principles of Holobionts and Hologenomes

(2015) Seth R. Bordenstein et al.   PLOS BIOLOGY

Advancing the science of microbial symbiosis to support invasive species management: a case study on Phragmites in the Great Lakes

(2015) Kurt P. Kowalski et al.   Frontiers in Microbiology

Endophytic Cultivable Bacteria of the Metal Bioaccumulator Spartina maritima Improve Plant Growth but Not Metal Uptake in Polluted Marshes Soils

(2015) Jennifer Mesa et al.   Frontiers in Microbiology

Improved Bacterial 16S rRNA Gene (V4 and V4-5) and Fungal Internal Transcribed Spacer Marker Gene Primers for Microbial Community Surveys

(2015) William Walters et al.   mSystems

Optimization of isolation and cultivation of bacterial endophytes through addition of plant extract to nutrient media

(2015) N. Eevers et al.   Microbial Biotechnology

Improved plant resistance to drought is promoted by the root-associated microbiome as a water stress-dependent trait

(2014) Eleonora Rolli et al.   ENVIRONMENTAL MICROBIOLOGY

Dynamics of bacterial community succession in a salt marsh chronosequence: evidences for temporal niche partitioning

(2014) Francisco Dini-Andreote et al.   ISME Journal

Amelioration of high salinity stress damage by plant growth-promoting bacterial endophytes that contain ACC deaminase

(2014) Shimaila Ali et al.   PLANT PHYSIOLOGY AND BIOCHEMISTRY

The rhizosphere microbiota of plant invaders: an overview of recent advances in the microbiomics of invasive plants

(2014) Vanessa C. Coats et al.   Frontiers in Microbiology

Structure and Functions of the Bacterial Microbiota of Plants

(2013) Davide Bulgarelli et al.   Annual Review of Plant Biology

New handbook for standardised measurement of plant functional traits worldwide

(2013) N. Pérez-Harguindeguy et al.   AUSTRALIAN JOURNAL OF BOTANY

The Impact of Beneficial Plant-Associated Microbes on Plant Phenotypic Plasticity

(2013) Chooi-Hua Goh et al.   JOURNAL OF CHEMICAL ECOLOGY

phyloseq: An R Package for Reproducible Interactive Analysis and Graphics of Microbiome Census Data

(2013) Paul J. McMurdie et al.   PLoS One

Spatio-temporal dynamics of the invasive plant speciesElytrigia athericaon natural salt marshes

(2012) Roos M. Veeneklaas et al.   APPLIED VEGETATION SCIENCE

Ecosystem assembly rules: the interplay of green and brown webs during salt marsh succession

(2012) Maarten Schrama et al.   ECOLOGY

Quality-filtering vastly improves diversity estimates from Illumina amplicon sequencing

(2012) Nicholas A Bokulich et al.   NATURE METHODS

Plant trait–environment relationships in salt marshes: Deviations from predictions by ecological concepts

(2012) Vanessa Minden et al.   PERSPECTIVES IN PLANT ECOLOGY EVOLUTION AND SYSTEMATICS

The rhizosphere microbiome and plant health

(2012) Roeland L. Berendsen et al.   TRENDS IN PLANT SCIENCE

Microbially Mediated Plant Functional Traits

(2011) Maren L. Friesen et al.   Annual Review of Ecology Evolution and Systematics

Seed origin determines the range expansion of the clonal grass Elymus athericus

(2011) Anna-Christina Bockelmann et al.   BASIC AND APPLIED ECOLOGY

Testing the effect-response framework: key response and effect traits determining above-ground biomass of salt marshes

(2011) Vanessa Minden et al.   JOURNAL OF VEGETATION SCIENCE

Changes in salt-marsh carabid assemblages after an invasion by the native grass Elymus athericus (Link) Kerguélen

(2011) Julien Pétillon et al.   ZooKeys

Climate change effects on beneficial plant-microorganism interactions

(2010) Stéphane Compant et al.   FEMS MICROBIOLOGY ECOLOGY

UniFrac: an effective distance metric for microbial community comparison

(2010) Catherine Lozupone et al.   ISME Journal

Shifts in microbial community structure along an ecological gradient of hypersaline soils and sediments

(2010) Emily B Hollister et al.   ISME Journal

QIIME allows analysis of high-throughput community sequencing data

(2010) J Gregory Caporaso et al.   NATURE METHODS

Plant growth-promoting bacteria in the rhizo- and endosphere of plants: Their role, colonization, mechanisms involved and prospects for utilization

(2009) Stéphane Compant et al.   SOIL BIOLOGY & BIOCHEMISTRY

Microbial Community Composition and Denitrifying Enzyme Activities in Salt Marsh Sediments

(2008) Y. Cao et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

The invasive Sorghum halepense harbors endophytic N2-fixing bacteria and alters soil biogeochemistry

(2008) Marnie E. Rout et al.   PLANT AND SOIL

Properties of bacterial endophytes and their proposed role in plant growth

(2008) Pablo R. Hardoim et al.   TRENDS IN MICROBIOLOGY