Combined Proteome and Transcriptome Analysis of Heat-Primed Azalea Reveals New Insights Into Plant Heat Acclimation Memory

Distinct heat shock factors and chromatin modifications mediate the organ-autonomous transcriptional memory of heat stress

(2018) Hsiang-chin Liu et al.   PLANT JOURNAL

COMT1 Silencing Aggravates Heat Stress-Induced Reduction in Photosynthesis by Decreasing Chlorophyll Content, Photosystem II Activity, and Electron Transport Efficiency in Tomato

(2018) Golam J. Ahammed et al.   Frontiers in Plant Science

The PRIDE database and related tools and resources in 2019: improving support for quantification data

(2018) Yasset Perez-Riverol et al.   NUCLEIC ACIDS RESEARCH

Genome-wide identification and analysis of biotic and abiotic stress regulation of small heat shock protein ( HSP20 ) family genes in bread wheat

(2017) Senthilkumar K. Muthusamy et al.   JOURNAL OF PLANT PHYSIOLOGY

The heat-shock protein/chaperone network and multiple stress resistance

(2017) Pierre Jacob et al.   PLANT BIOTECHNOLOGY JOURNAL

Evolution of Rubisco activase gene in plants

(2017) Ragupathi Nagarajan et al.   PLANT MOLECULAR BIOLOGY

Transgenerational Defense Priming for Crop Protection against Plant Pathogens: A Hypothesis

(2017) Gabriela Ramírez-Carrasco et al.   Frontiers in Plant Science

Photosynthesis: ancient, essential, complex, diverse … and in need of improvement in a changing world

(2016) Ülo Niinemets et al.   NEW PHYTOLOGIST

Recognizing Plant Defense Priming

(2016) Ainhoa Martinez-Medina et al.   TRENDS IN PLANT SCIENCE

Priming for Enhanced Defense

(2015) Uwe Conrath et al.   Annual Review of Phytopathology

Accumulation of extra-chloroplastic triacylglycerols inArabidopsisseedlings during heat acclimation

(2015) Stephanie P. Mueller et al.   JOURNAL OF EXPERIMENTAL BOTANY

Extending the Limits of Quantitative Proteome Profiling with Data-Independent Acquisition and Application to Acetaminophen-Treated Three-Dimensional Liver Microtissues

(2015) Roland Bruderer et al.   MOLECULAR & CELLULAR PROTEOMICS

MSstats: an R package for statistical analysis of quantitative mass spectrometry-based proteomic experiments

(2014) Meena Choi et al.   BIOINFORMATICS

Fast and sensitive protein alignment using DIAMOND

(2014) Benjamin Buchfink et al.   NATURE METHODS

Optimizing Rubisco and its regulation for greater resource use efficiency

(2014) ELIZABETE CARMO-SILVA et al.   PLANT CELL AND ENVIRONMENT

Photosynthetic enzyme activities and gene expression associated with drought tolerance and post-drought recovery in Kentucky bluegrass

(2013) Lixin Xu et al.   ENVIRONMENTAL AND EXPERIMENTAL BOTANY

Chloroplast Small Heat Shock Protein HSP21 Interacts with Plastid Nucleoid Protein pTAC5 and Is Essential for Chloroplast Development in Arabidopsis under Heat Stress

(2013) L. Zhong et al.   PLANT CELL

Interplay between Heat Shock Proteins HSP101 and HSA32 Prolongs Heat Acclimation Memory Posttranscriptionally in Arabidopsis

(2013) T.-y. Wu et al.   PLANT PHYSIOLOGY

Ecological stress memory and cross stress tolerance in plants in the face of climate extremes

(2012) Julia Walter et al.   ENVIRONMENTAL AND EXPERIMENTAL BOTANY

Function of alternative splicing

(2012) Olga Kelemen et al.   GENE

Fast gapped-read alignment with Bowtie 2

(2012) Ben Langmead et al.   NATURE METHODS

On the physiological significance of alternative splicing events in higher plants

(2012) Raquel F. Carvalho et al.   PROTOPLASMA

RSEM: accurate transcript quantification from RNA-Seq data with or without a reference genome

(2011) Bo Li et al.   BMC BIOINFORMATICS

Expansion of the eukaryotic proteome by alternative splicing

(2010) Timothy W. Nilsen et al.   NATURE

DEGseq: an R package for identifying differentially expressed genes from RNA-seq data

(2009) Likun Wang et al.   BIOINFORMATICS

MaxQuant enables high peptide identification rates, individualized p.p.b.-range mass accuracies and proteome-wide protein quantification

(2008) Jürgen Cox et al.   NATURE BIOTECHNOLOGY

Heat stress: an overview of molecular responses in photosynthesis

(2008) Suleyman I. Allakhverdiev et al.   PHOTOSYNTHESIS RESEARCH