Polygenic basis for adaptive morphological variation in a threatened Aotearoa | New Zealand bird, the hihi ( Notiomystis cincta )

Expression of Hey2 transcription factor in the early embryonic ventricles is controlled through a distal enhancer by Tbx20 and Gata transcription factors

(2020) Dai Ihara et al.   DEVELOPMENTAL BIOLOGY

A comparison of pedigree, genetic and genomic estimates of relatedness for informing pairing decisions in two critically endangered birds: Implications for conservation breeding programmes worldwide

(2020) Stephanie J. Galla et al.   Evolutionary Applications

Important role of genetic drift in rapid polygenic adaptation

(2020) Sona John et al.   Ecology and Evolution

Polygenic adaptation: From sweeps to subtle frequency shifts

(2019) Ilse Höllinger et al.   PLoS Genetics

Statistical power in genome-wide association studies and quantitative trait locus mapping

(2019) Meiyue Wang et al.   HEREDITY

Little Adaptive Potential in a Threatened Passerine Bird

(2019) Pierre de Villemereuil et al.   CURRENT BIOLOGY

Fixed-effect variance and the estimation of repeatabilities and heritabilities: issues and solutions

(2018) P. de Villemereuil et al.   JOURNAL OF EVOLUTIONARY BIOLOGY

Inference of genetic architecture from chromosome partitioning analyses is sensitive to genome variation, sample size, heritability and effect size distribution

(2018) Petri Kemppainen et al.   Molecular Ecology Resources

A high-density SNP chip for genotyping great tit (Parus major ) populations and its application to studying the genetic architecture of exploration behaviour

(2018) J.-M. Kim et al.   Molecular Ecology Resources

Heritability estimates from genomewide relatedness matrices in wild populations: Application to a passerine, using a small sample size

(2018) C. Perrier et al.   Molecular Ecology Resources

Wild GWAS-association mapping in natural populations

(2018) Anna W. Santure et al.   Molecular Ecology Resources

Contrasting results from GWAS and QTL mapping on wing length in great reed warblers

(2018) Bengt Hansson et al.   Molecular Ecology Resources

Inferences of genetic architecture of bill morphology in house sparrow using a high-density SNP array point to a polygenic basis

(2018) Sarah L. Lundregan et al.   MOLECULAR ECOLOGY

Can threatened species adapt in a restored habitat? No expected evolutionary response in lay date for the New Zealand hihi

(2018) Pierre Villemereuil et al.   Evolutionary Applications

Ensembl 2019

(2018) Fiona Cunningham et al.   NUCLEIC ACIDS RESEARCH

Insights into the genetic architecture of morphological traits in two passerine bird species

(2017) C N S Silva et al.   HEREDITY

The adaptive genomic landscape of beak morphology in Darwin's finches

(2017) Lucinda P. Lawson et al.   MOLECULAR ECOLOGY

Recent natural selection causes adaptive evolution of an avian polygenic trait

(2017) Mirte Bosse et al.   SCIENCE

Genomic Quantitative Genetics to Study Evolution in the Wild

(2017) Phillip Gienapp et al.   TRENDS IN ECOLOGY & EVOLUTION

Revisiting Adaptive Potential, Population Size, and Conservation

(2017) Ary A. Hoffmann et al.   TRENDS IN ECOLOGY & EVOLUTION

Environment-Dependent Genotype-Phenotype Associations in Avian Breeding Time

(2017) Phillip Gienapp et al.   Frontiers in Genetics

Genomic Consequences of Population Decline in the Endangered Florida Scrub-Jay

(2016) Nancy Chen et al.   CURRENT BIOLOGY

Increasing the power of genome wide association studies in natural populations using repeated measures - evaluation and implementation

(2016) Lars Rönnegård et al.   Methods in Ecology and Evolution

Determinants of male floating behaviour and floater reproduction in a threatened population of the hihi (Notiomystis cincta)

(2015) Patricia Brekke et al.   Evolutionary Applications

Heterogeneity of genetic architecture of body size traits in a free-living population

(2015) Camillo Bérénos et al.   MOLECULAR ECOLOGY

Replicated analysis of the genetic architecture of quantitative traits in two wild great tit populations

(2015) Anna W. Santure et al.   MOLECULAR ECOLOGY

Whole-genome resequencing of extreme phenotypes in collared flycatchers highlights the difficulty of detecting quantitative trait loci in natural populations

(2015) Marty Kardos et al.   Molecular Ecology Resources

Genome-wide association mapping in a wild avian population identifies a link between genetic and phenotypic variation in a life-history trait

(2015) A. Husby et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Genomics and the challenging translation into conservation practice

(2015) Aaron B.A. Shafer et al.   TRENDS IN ECOLOGY & EVOLUTION

Towards the identification of the loci of adaptive evolution

(2015) Carolina Pardo-Diaz et al.   Methods in Ecology and Evolution

Genomic Heritability: What Is It?

(2015) Gustavo de los Campos et al.   PLoS Genetics

Simultaneous Discovery, Estimation and Prediction Analysis of Complex Traits Using a Bayesian Mixture Model

(2015) Gerhard Moser et al.   PLoS Genetics

MCMC Methods for Multi-Response Generalized Linear Mixed Models: TheMCMCglmmRPackage

(2015) Jarrod D. Hadfield   Journal of Statistical Software

Using genomics to characterize evolutionary potential for conservation of wild populations

(2014) Katherine A. Harrisson et al.   Evolutionary Applications

Estimating quantitative genetic parameters in wild populations: a comparison of pedigree and genomic approaches

(2014) Camillo Bérénos et al.   MOLECULAR ECOLOGY

Advantages and pitfalls in the application of mixed-model association methods

(2014) Jian Yang et al.   NATURE GENETICS

Comparative genomics reveals insights into avian genome evolution and adaptation

(2014) G. Zhang et al.   SCIENCE

Genomic dissection of variation in clutch size and egg mass in a wild great tit (Parus major) population

(2013) Anna W. Santure et al.   MOLECULAR ECOLOGY

Partitioning of genetic variation across the genome using multimarker methods in a wild bird population

(2013) Matthew R. Robinson et al.   MOLECULAR ECOLOGY

Genotyping-by-sequencing in ecological and conservation genomics

(2013) Shawn R. Narum et al.   MOLECULAR ECOLOGY

Life history trade-offs at a single locus maintain sexually selected genetic variation

(2013) Susan E. Johnston et al.   NATURE

Ecological genomics of local adaptation

(2013) Outi Savolainen et al.   NATURE REVIEWS GENETICS

QTL and quantitative genetic analysis of beak morphology reveals patterns of standing genetic variation in an Estrildid finch

(2012) ULRICH KNIEF et al.   MOLECULAR ECOLOGY

Postcopulatory mechanisms of inbreeding avoidance in the island endemic hihi (Notiomystis cincta)

(2011) Patricia Brekke et al.   BEHAVIORAL ECOLOGY

Novel strategies to minimize progeny inbreeding while maximizing genetic gain using genomic information

(2011) J.E. Pryce et al.   JOURNAL OF DAIRY SCIENCE

Genome partitioning of genetic variation for complex traits using common SNPs

(2011) Jian Yang et al.   NATURE GENETICS

Declining body size: a third universal response to warming?

(2011) Janet L. Gardner et al.   TRENDS IN ECOLOGY & EVOLUTION

GCTA: A Tool for Genome-wide Complex Trait Analysis

(2010) Jian Yang et al.   AMERICAN JOURNAL OF HUMAN GENETICS

Conservation genetics of population bottlenecks: the role of chance, selection, and history

(2010) Juan L. Bouzat   CONSERVATION GENETICS

High genetic diversity in the remnant island population of hihi and the genetic consequences of re-introduction

(2010) PATRICIA BREKKE et al.   MOLECULAR ECOLOGY

Patterns of mortality for each life-history stage in a population of the endangered New Zealand stitchbird

(2009) Matthew Low et al.   JOURNAL OF ANIMAL ECOLOGY

An ecologist’s guide to the animal model

(2009) Alastair J. Wilson et al.   JOURNAL OF ANIMAL ECOLOGY

Finding the missing heritability of complex diseases

(2009) Teri A. Manolio et al.   NATURE