Persistent El Niño driven shifts in marine cyanobacteria populations

Multi‐year dynamics of fine‐scale marine cyanobacterial populations are more strongly explained by phage interactions than abiotic, bottom‐up factors

(2019) Nathan A. Ahlgren et al.   ENVIRONMENTAL MICROBIOLOGY

Subtle biogeochemical regimes in the Indian Ocean revealed by spatial and diel frequency of Prochlorococcus haplotypes

(2019) Alyse A. Larkin et al.   LIMNOLOGY AND OCEANOGRAPHY

Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2

(2019) Evan Bolyen et al.   NATURE BIOTECHNOLOGY

Scientists’ warning to humanity: microorganisms and climate change

(2019) Ricardo Cavicchioli et al.   NATURE REVIEWS MICROBIOLOGY

Phylogenetic conservation of bacterial responses to soil nitrogen addition across continents

(2019) Kazuo Isobe et al.   Nature Communications

CCE V: Primary Production, Mesozooplankton Grazing, and the Biological Pump in the California Current Ecosystem: Variability and Response to El Niño

(2018) Rebecca M. Morrow et al.   DEEP-SEA RESEARCH PART I-OCEANOGRAPHIC RESEARCH PAPERS

Temporal dynamics of eukaryotic microbial diversity at a coastal Pacific site

(2018) Maitreyi Nagarkar et al.   ISME Journal

CCE II: Spatial and interannual variability in export efficiency and the biological pump in an eastern boundary current upwelling system with substantial lateral advection

(2018) Thomas B. Kelly et al.   DEEP-SEA RESEARCH PART I-OCEANOGRAPHIC RESEARCH PAPERS

CCE IV: El Niño-related zooplankton variability in the southern California Current System

(2018) Laura E. Lilly et al.   DEEP-SEA RESEARCH PART I-OCEANOGRAPHIC RESEARCH PAPERS

Introduction to collection of papers on the response of the southern California Current Ecosystem to the Warm Anomaly and El Niño, 2014–16

(2018) Mark D. Ohman   DEEP-SEA RESEARCH PART I-OCEANOGRAPHIC RESEARCH PAPERS

Annual community patterns are driven by seasonal switching between closely related marine bacteria

(2017) Christopher S Ward et al.   ISME Journal

Oxic-anoxic regime shifts mediated by feedbacks between biogeochemical processes and microbial community dynamics

(2017) Timothy Bush et al.   Nature Communications

Niche partitioning and biogeography of high light adapted Prochlorococcus across taxonomic ranks in the North Pacific

(2016) Alyse A Larkin et al.   ISME Journal

Multi-year persistence of the 2014/15 North Pacific marine heatwave

(2016) Emanuele Di Lorenzo et al.   Nature Climate Change

Changes in source waters to the Southern California Bight

(2015) Steven J. Bograd et al.   DEEP-SEA RESEARCH PART II-TOPICAL STUDIES IN OCEANOGRAPHY

Seasonal assemblages and short-lived blooms in coastal north-west Atlantic Ocean bacterioplankton

(2015) Heba El-Swais et al.   ENVIRONMENTAL MICROBIOLOGY

Microbial response to simulated global change is phylogenetically conserved and linked with functional potential

(2015) Anthony S Amend et al.   ISME Journal

Cross-depth analysis of marine bacterial networks suggests downward propagation of temporal changes

(2015) Jacob A Cram et al.   ISME Journal

Biogeochemical interactions control a temporal succession in the elemental composition of marine communities

(2015) Adam C. Martiny et al.   LIMNOLOGY AND OCEANOGRAPHY

Millennial-scale plankton regime shifts in the subtropical North Pacific Ocean

(2015) K. W. McMahon et al.   SCIENCE

Soil respiration under climate warming: differential response of heterotrophic and autotrophic respiration

(2014) Xin Wang et al.   GLOBAL CHANGE BIOLOGY

Seasonal and interannual variability of the marine bacterioplankton community throughout the water column over ten years

(2014) Jacob A Cram et al.   ISME Journal

Beta diversity of marine bacteria depends on temporal scale

(2013) Stephen M. Hatosy et al.   ECOLOGY

Impact of warming on phyto-bacterioplankton coupling and bacterial community composition in experimental mesocosms

(2013) Markus von Scheibner et al.   ENVIRONMENTAL MICROBIOLOGY

Short-term observations of marine bacterial and viral communities: patterns, connections and resilience

(2013) David M Needham et al.   ISME Journal

Marine Ecosystem Dynamics and Biogeochemical Cycling in the Community Earth System Model [CESM1(BGC)]: Comparison of the 1990s with the 2090s under the RCP4.5 and RCP8.5 Scenarios

(2013) J. Keith Moore et al.   JOURNAL OF CLIMATE

Marine Ecosystem Response to the Atlantic Multidecadal Oscillation

(2013) Martin Edwards et al.   PLoS One

Present and future global distributions of the marine Cyanobacteria Prochlorococcus and Synechococcus

(2013) P. Flombaum et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Decadal water-property trends in the California Undercurrent, with implications for ocean acidification

(2013) M. Meinvielle et al.   JOURNAL OF GEOPHYSICAL RESEARCH-OCEANS

Lake microbial communities are resilient after a whole-ecosystem disturbance

(2012) Ashley Shade et al.   ISME Journal

Phylogenetic conservatism of functional traits in microorganisms

(2012) Adam C Martiny et al.   ISME Journal

Which sequencing depth is sufficient to describe patterns in bacterial α- and β-diversity?

(2012) Daniel Lundin et al.   Environmental Microbiology Reports

Climate Change Impacts on Marine Ecosystems

(2011) Scott C. Doney et al.   Annual Review of Marine Science

Projected expansion of the subtropical biome and contraction of the temperate and equatorial upwelling biomes in the North Pacific under global warming

(2011) J. J. Polovina et al.   ICES JOURNAL OF MARINE SCIENCE

Defining seasonal marine microbial community dynamics

(2011) Jack A Gilbert et al.   ISME Journal

Temporal and spatial distributions of marine Synechococcus in the Southern California Bight assessed by hybridization to bead-arrays

(2011) V Tai et al.   MARINE ECOLOGY PROGRESS SERIES

Recovery rates reflect distance to a tipping point in a living system

(2011) Annelies J. Veraart et al.   NATURE

Temporal dynamics of Prochlorococcus ecotypes in the Atlantic and Pacific oceans

(2010) Rex R Malmstrom et al.   ISME Journal

Typhoons initiate predictable change in aquatic bacterial communities

(2010) Stuart E. Jones et al.   LIMNOLOGY AND OCEANOGRAPHY

Characterization of Prochlorococcus clades from iron-depleted oceanic regions

(2010) D. B. Rusch et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Biopython: freely available Python tools for computational molecular biology and bioinformatics

(2009) P. J. A. Cock et al.   BIOINFORMATICS

Temporal variation of Synechococcus clades at a coastal Pacific Ocean monitoring site

(2009) Vera Tai et al.   ISME Journal

Ecological Genomics of Marine Picocyanobacteria

(2009) D. J. Scanlan et al.   MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS

Climate-Driven Basin-Scale Decadal Oscillations of Oceanic Phytoplankton

(2009) E. Martinez et al.   SCIENCE

The Origins of Ecological Diversity in Prokaryotes

(2008) Frederick M. Cohan et al.   CURRENT BIOLOGY

Resistance, resilience, and redundancy in microbial communities

(2008) S. D. Allison et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA