4.8 Article

Learning Entropy Production via Neural Networks

期刊

PHYSICAL REVIEW LETTERS
卷 125, 期 14, 页码 -

出版社

AMER PHYSICAL SOC
DOI: 10.1103/PhysRevLett.125.140604

关键词

-

资金

  1. Basic Science Research Program through the National Research Foundation of Korea (NRF) [NRF-2017R1A2B3006930]

向作者/读者索取更多资源

This Letter presents a neural estimator for entropy production (NEEP), that estimates entropy production (EP) from trajectories of relevant variables without detailed information on the system dynamics. For steady state, we rigorously prove that the estimator, which can be built up from different choices of deep neural networks, provides stochastic EP by optimizing the objective function proposed here. We vetify the NEEP with the stochastic processes of the bead spring and discrete flashing ratchet models and also demonstrate that our method is applicable to high-dimensional data and can provide coarse-grained EP for Markov systems with unobservable states.

作者

我是这篇论文的作者
点击您的名字以认领此论文并将其添加到您的个人资料中。

评论

主要评分

4.8
评分不足

次要评分

新颖性
-
重要性
-
科学严谨性
-
评价这篇论文

推荐

Article Chemistry, Multidisciplinary

Encoding Multiple Virtual Signals in DNA Barcodes with Single-Molecule FRET

Sung Hyun Kim, Hyunwoo Kim, Hawoong Jeong, Tae-Young Yoon

Summary: The study demonstrates the use of single-molecule FRET technology to encode virtual signals in DNA barcodes, allowing for precise measurement of FRET efficiency for each binding event and differentiation of six DNA barcodes.

NANO LETTERS (2021)

Article Multidisciplinary Sciences

Impact of environmental changes on the dynamics of temporal networks

Hyewon Kim, Hang-Hyun Jo, Hawoong Jeong

Summary: The impact of environmental changes on the dynamics of temporal networks is important, with interaction patterns varying in different environments. By studying a temporal network model and considering environmental changes, it is possible to successfully reproduce empirical results regarding multiscale temporal correlations.

PLOS ONE (2021)

Article Multidisciplinary Sciences

Unraveling hidden interactions in complex systems with deep learning

Seungwoong Ha, Hawoong Jeong

Summary: The study introduces AgentNet, a model-free data-driven framework utilizing deep neural networks to reveal and analyze the hidden interactions in complex systems. AgentNet successfully captured a wide variety of simulated complex systems and demonstrated potential applications with real bird flock data.

SCIENTIFIC REPORTS (2021)

Article Physics, Multidisciplinary

Speed Limit for a Highly Irreversible Process and Tight Finite-Time Landauer?s Bound

Jae Sung Lee, Sangyun Lee, Hyukjoon Kwon, Hyunggyu Park

Summary: Landauer's bound is the minimum thermodynamic cost for erasing one bit of information. Finite-time operation incurs additional energetic costs, with different scaling behavior depending on the degree of irreversibility of the process. Optimal dynamics can lead to the equality of the bound.

PHYSICAL REVIEW LETTERS (2022)

Article Physics, Multidisciplinary

Multidimensional entropic bound: Estimator of entropy production for Langevin dynamics with an arbitrary time-dependent protocol

Sangyun Lee, Dong-Kyum Kim, Jong-Min Park, Won Kyu Kim, Hyunggyu Park, Jae Sung Lee

Summary: Entropy production is a key quantity in thermodynamics, but measuring it has remained challenging. However, a newly introduced estimator called multidimensional entropic bound (MEB) utilizing an ensemble of trajectories can accurately estimate the entropy production of overdamped Langevin systems with any time-dependent protocol. The MEB also provides a unified platform to estimate entropy production of underdamped Langevin systems under certain conditions and has the advantage of computational efficiency. Numerical simulations confirm the validity and efficiency of this method by applying it to three physical systems driven by time-dependent protocols in optical tweezers experiments: a dragged Brownian particle, the pulling process of a harmonic chain, and the unfolding process of an RNA hairpin.

PHYSICAL REVIEW RESEARCH (2023)

Article Physics, Multidisciplinary

Inferring dissipation maps from videos using convolutional neural networks

Youngkyoung Bae, Dong-Kyum Kim, Hawoong Jeong

Summary: This paper presents a method to estimate and visualize the dissipation pattern in living organisms at mesoscopic scales through analyzing recorded videos. The estimator accurately measures the stochastic entropy production (EP) and provides a locally heterogeneous dissipation map. This method can contribute to understanding complex nonequilibrium phenomena and their dissipation mechanisms.

PHYSICAL REVIEW RESEARCH (2022)

Article Physics, Multidisciplinary

Estimating entropy production with odd-parity state variables via machine learning

Dong-Kyum Kim, Sangyun Lee, Hawoong Jeong

Summary: In this study, a machine-learning method is developed to estimate the entropy production in a stochastic system with odd-parity variables using multiple neural networks. This method enables the measurement of entropy production solely based on trajectory data and parity information.

PHYSICAL REVIEW RESEARCH (2022)

Article Physics, Multidisciplinary

Uncovering hidden dependency in weighted networks via information entropy

Mi Jin Lee, Eun Lee, Byunghwee Lee, Hawoong Jeong, Deok-Sun Lee, Sang Hoon Lee

Summary: This study focuses on the framework for discovering hidden dependent relationships in weighted networks by selecting essential interactions for individual nodes based on information entropy. The analysis reveals that nations in the world trade network exhibit more asymmetric dependent relations compared to their random counterparts, while relationships among individuals in the historical record of Korea are more mutual.

PHYSICAL REVIEW RESEARCH (2021)

Article Physics, Multidisciplinary

Discovering invariants via machine learning

Seungwoong Ha, Hawoong Jeong

Summary: ConservNet is a neural network that learns hidden invariants from grouped data with an intuitive loss function, making it robust to various noise and data conditions, and directly applicable to experimental data for discovering hidden conservation laws and general relationships between variables.

PHYSICAL REVIEW RESEARCH (2021)

Article Physics, Fluids & Plasmas

Inertial effects on the Brownian gyrator

Youngkyoung Bae, Sangyun Lee, Juin Kim, Hawoong Jeong

Summary: The research found that the dynamics and energetics of the Brownian gyrator are influenced by mass, with inertia helping to reduce nonequilibrium effects. In the Langevin model, rotation is maximized at a particular anisotropy while stability decreases at a specific anisotropy or mass.

PHYSICAL REVIEW E (2021)

Article Physics, Fluids & Plasmas

Quantumness and thermodynamic uncertainty relation of the finite-time Otto cycle

Sangyun Lee, Meesoon Ha, Hawoong Jeong

Summary: By studying the quantum and classical Otto cycles, it was found that quantumness can reduce productivity and precision in the quasistatic limit but increase them in the finite-time mode. Moreover, the precision of the quantum Otto cycle surpasses that of the classical one as the strength between the system and the bath increases. Additionally, both quantum and classical Otto cycles violate the conventional TUR in the region where entropy production is small in the finite-time mode, suggesting the need for a modified TUR to cover such scenarios.

PHYSICAL REVIEW E (2021)

暂无数据