GTree: an Open-source Tool for Dense Reconstruction of Brain-wide Neuronal Population
出版年份 2020 全文链接
标题
GTree: an Open-source Tool for Dense Reconstruction of Brain-wide Neuronal Population
作者
关键词
-
出版物
NEUROINFORMATICS
Volume -, Issue -, Pages -
出版商
Springer Science and Business Media LLC
发表日期
2020-08-26
DOI
10.1007/s12021-020-09484-6
参考文献
相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。- Identifying Weak Signals in Inhomogeneous Neuronal Images for Large-Scale Tracing of Sparsely Distributed Neurites
- (2019) Shiwei Li et al. NEUROINFORMATICS
- Optimization of Traced Neuron Skeleton Using Lasso-Based Model
- (2019) Shiwei Li et al. Frontiers in Neuroanatomy
- Precise segmentation of densely interweaving neuron clusters using G-Cut
- (2019) Rui Li et al. Nature Communications
- Brain-Wide Shape Reconstruction of a Traced Neuron Using the Convex Image Segmentation Method
- (2019) Shiwei Li et al. NEUROINFORMATICS
- The logic of single-cell projections from visual cortex
- (2018) Yunyun Han et al. NATURE
- Automated Neuron Reconstruction from 3D Fluorescence Microscopy Images Using Sequential Monte Carlo Estimation
- (2018) Miroslav Radojević et al. NEUROINFORMATICS
- Double-slit photoelectron interference in strong-field ionization of the neon dimer
- (2018) Maksim Kunitski et al. Nature Communications
- Deep Edge Guided Recurrent Residual Learning for Image Super-Resolution
- (2017) Wenhan Yang et al. IEEE TRANSACTIONS ON IMAGE PROCESSING
- Automatic tracing of ultra-volumes of neuronal images
- (2017) Hanchuan Peng et al. NATURE METHODS
- TDat: An Efficient Platform for Processing Petabyte-Scale Whole-Brain Volumetric Images
- (2017) Yuxin Li et al. Frontiers in Neural Circuits
- A Manual Segmentation Tool for Three-Dimensional Neuron Datasets
- (2017) Chiara Magliaro et al. Frontiers in Neuroinformatics
- TeraFly: real-time three-dimensional visualization and annotation of terabytes of multidimensional volumetric images
- (2016) Alessandro Bria et al. NATURE METHODS
- SparseTracer: the Reconstruction of Discontinuous Neuronal Morphology in Noisy Images
- (2016) Shiwei Li et al. NEUROINFORMATICS
- A platform for brain-wide imaging and reconstruction of individual neurons
- (2016) Michael N Economo et al. eLife
- Population-scale three-dimensional reconstruction and quantitative profiling of microglia arbors
- (2015) Murad Megjhani et al. BIOINFORMATICS
- NeuroGPS-Tree: automatic reconstruction of large-scale neuronal populations with dense neurites
- (2015) Tingwei Quan et al. NATURE METHODS
- BigDataViewer: visualization and processing for large image data sets
- (2015) Tobias Pietzsch et al. NATURE METHODS
- From DIADEM to BigNeuron
- (2015) Hanchuan Peng et al. NEUROINFORMATICS
- BigNeuron: Large-Scale 3D Neuron Reconstruction from Optical Microscopy Images
- (2015) Hanchuan Peng et al. NEURON
- Large-scale automated image analysis for computational profiling of brain tissue surrounding implanted neuroprosthetic devices using Python
- (2014) Nicolas Rey-Villamizar et al. Frontiers in Neuroinformatics
- Mapping brain circuitry with a light microscope
- (2013) Pavel Osten et al. NATURE METHODS
- CLARITY for mapping the nervous system
- (2013) Kwanghun Chung et al. NATURE METHODS
- Continuously tracing brain-wide long-distance axonal projections in mice at a one-micron voxel resolution
- (2013) Hui Gong et al. NEUROIMAGE
- Serial two-photon tomography for automated ex vivo mouse brain imaging
- (2012) Timothy Ragan et al. NATURE METHODS
- Quantitative high-speed imaging of entire developing embryos with simultaneous multiview light-sheet microscopy
- (2012) Raju Tomer et al. NATURE METHODS
- Confocal light sheet microscopy: micron-scale neuroanatomy of the entire mouse brain
- (2012) L. Silvestri et al. OPTICS EXPRESS
- Sparse and combinatorial neuron labelling
- (2011) Gregory SXE Jefferis et al. CURRENT OPINION IN NEUROBIOLOGY
- High-accuracy neurite reconstruction for high-throughput neuroanatomy
- (2011) Moritz Helmstaedter et al. NATURE NEUROSCIENCE
- The DIADEM Data Sets: Representative Light Microscopy Images of Neuronal Morphology to Advance Automation of Digital Reconstructions
- (2011) Kerry M. Brown et al. NEUROINFORMATICS
- The FARSIGHT Trace Editor: An Open Source Tool for 3-D Inspection and Efficient Pattern Analysis Aided Editing of Automated Neuronal Reconstructions
- (2011) Jonathan Luisi et al. NEUROINFORMATICS
- Automated Reconstruction of Neuronal Morphology Based on Local Geometrical and Global Structural Models
- (2011) Ting Zhao et al. NEUROINFORMATICS
- The Big and the Small: Challenges of Imaging the Brain's Circuits
- (2011) J. W. Lichtman et al. SCIENCE
- Automated reconstruction of neuronal morphology: An overview
- (2010) Duncan E. Donohue et al. BRAIN RESEARCH REVIEWS
- Neuron tracing in perspective
- (2010) Erik Meijering CYTOMETRY PART A
- V3D enables real-time 3D visualization and quantitative analysis of large-scale biological image data sets
- (2010) Hanchuan Peng et al. NATURE BIOTECHNOLOGY
- From the Connectome to the Synaptome: An Epic Love Story
- (2010) J. DeFelipe SCIENCE
- Micro-Optical Sectioning Tomography to Obtain a High-Resolution Atlas of the Mouse Brain
- (2010) A. Li et al. SCIENCE
- A Proposal for a Coordinated Effort for the Determination of Brainwide Neuroanatomical Connectivity in Model Organisms at a Mesoscopic Scale
- (2009) Jason W. Bohland et al. PLoS Computational Biology
Find Funding. Review Successful Grants.
Explore over 25,000 new funding opportunities and over 6,000,000 successful grants.
ExplorePublish scientific posters with Peeref
Peeref publishes scientific posters from all research disciplines. Our Diamond Open Access policy means free access to content and no publication fees for authors.
Learn More