Edge-centric functional network representations of human cerebral cortex reveal overlapping system-level architecture

Space-independent community and hub structure of functional brain networks

(2020) Farnaz Zamani Esfahlani et al.   NEUROIMAGE

Modular preprocessing pipelines can reintroduce artifacts into fMRI data

(2019) Martin A. Lindquist et al.   HUMAN BRAIN MAPPING

Human cognition involves the dynamic integration of neural activity and neuromodulatory systems

(2019) James M. Shine et al.   NATURE NEUROSCIENCE

Functional boundaries in the human cerebellum revealed by a multi-domain task battery

(2019) Maedbh King et al.   NATURE NEUROSCIENCE

The community structure of functional brain networks exhibits scale-specific patterns of inter- and intra-subject variability

(2019) Richard F. Betzel et al.   NEUROIMAGE

Advancing functional connectivity research from association to causation

(2019) Andrew T. Reid et al.   NATURE NEUROSCIENCE

Functional parcellation using time courses of instantaneous connectivity

(2018) Erik S.B. van Oort et al.   NEUROIMAGE

Topographic organization of the cerebral cortex and brain cartography

(2018) Simon B. Eickhoff et al.   NEUROIMAGE

An evaluation of the efficacy, reliability, and sensitivity of motion correction strategies for resting-state functional MRI

(2018) Linden Parkes et al.   NEUROIMAGE

The quest for identifiability in human functional connectomes

(2018) Enrico Amico et al.   Scientific Reports

Representation of real-world event schemas during narrative perception

(2018) Christopher Baldassano et al.   JOURNAL OF NEUROSCIENCE

fMRIPrep: a robust preprocessing pipeline for functional MRI

(2018) Oscar Esteban et al.   NATURE METHODS

Multilayer network switching rate predicts brain performance

(2018) Mangor Pedersen et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Task activations produce spurious but systematic inflation of task functional connectivity estimates

(2018) Michael W. Cole et al.   NEUROIMAGE

Network neuroscience

(2017) Danielle S Bassett et al.   NATURE NEUROSCIENCE

Communication dynamics in complex brain networks

(2017) Andrea Avena-Koenigsberger et al.   NATURE REVIEWS NEUROSCIENCE

Micro-connectomics: probing the organization of neuronal networks at the cellular scale

(2017) Manuel Schröter et al.   NATURE REVIEWS NEUROSCIENCE

Precision Functional Mapping of Individual Human Brains

(2017) Evan M. Gordon et al.   NEURON

MRIQC: Advancing the automatic prediction of image quality in MRI from unseen sites

(2017) Oscar Esteban et al.   PLoS One

Versatility of nodal affiliation to communities

(2017) Maxwell Shinn et al.   Scientific Reports

Mindboggling morphometry of human brains

(2017) Arno Klein et al.   PLoS Computational Biology

The Healthy Brain Network Serial Scanning Initiative: a resource for evaluating inter-individual differences and their reliabilities across scan conditions and sessions

(2017) David O’Connor et al.   GigaScience

Modular Brain Networks

(2016) Olaf Sporns et al.   Annual Review of Psychology

Community Detection in Temporal Multilayer Networks, with an Application to Correlation Networks

(2016) Marya Bazzi et al.   MULTISCALE MODELING & SIMULATION

Computational psychiatry as a bridge from neuroscience to clinical applications

(2016) Quentin J M Huys et al.   NATURE NEUROSCIENCE

Overlapping communities reveal rich structure in large-scale brain networks during rest and task conditions

(2016) Mahshid Najafi et al.   NEUROIMAGE

Situating the default-mode network along a principal gradient of macroscale cortical organization

(2016) Daniel S. Margulies et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Uniting functional network topology and oscillations in the fronto-parietal single unit network of behaving primates

(2016) Benjamin Dann et al.   eLife

Characterization and Correction of Geometric Distortions in 814 Diffusion Weighted Images

(2016) Jeffrey Mark Treiber et al.   PLoS One

A positive-negative mode of population covariation links brain connectivity, demographics and behavior

(2015) Stephen M Smith et al.   NATURE NEUROSCIENCE

Functional connectome fingerprinting: identifying individuals using patterns of brain connectivity

(2015) Emily S Finn et al.   NATURE NEUROSCIENCE

Estimation of dynamic functional connectivity using Multiplication of Temporal Derivatives

(2015) James M. Shine et al.   NEUROIMAGE

Functional System and Areal Organization of a Highly Sampled Individual Human Brain

(2015) Timothy O. Laumann et al.   NEURON

The modular and integrative functional architecture of the human brain

(2015) Maxwell A. Bertolero et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Dynamic Network Drivers of Seizure Generation, Propagation and Termination in Human Neocortical Epilepsy

(2015) Ankit N. Khambhati et al.   PLoS Computational Biology

Brain Network Adaptability across Task States

(2015) Elizabeth N. Davison et al.   PLoS Computational Biology

MSM: A new flexible framework for Multimodal Surface Matching

(2014) Emma C. Robinson et al.   NEUROIMAGE

An edge-centric perspective on the human connectome: link communities in the brain

(2014) M. A. de Reus et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Understanding brain networks and brain organization

(2014) Luiz Pessoa   Physics of Life Reviews

Overlapping Communities Explain Core–Periphery Organization of Networks

(2014) Jaewon Yang et al.   PROCEEDINGS OF THE IEEE

Machine learning for neuroimaging with scikit-learn

(2014) Alexandre Abraham et al.   Frontiers in Neuroinformatics

Describing functional diversity of brain regions and brain networks

(2013) Michael L. Anderson et al.   NEUROIMAGE

The WU-Minn Human Connectome Project: An overview

(2013) David C. Van Essen et al.   NEUROIMAGE

The minimal preprocessing pipelines for the Human Connectome Project

(2013) Matthew F. Glasser et al.   NEUROIMAGE

Methods to detect, characterize, and remove motion artifact in resting state fMRI

(2013) Jonathan D. Power et al.   NEUROIMAGE

Estimates of segregation and overlap of functional connectivity networks in the human cerebral cortex

(2013) B.T. Thomas Yeo et al.   NEUROIMAGE

Evidence for Hubs in Human Functional Brain Networks

(2013) Jonathan D. Power et al.   NEURON

Efficient discovery of overlapping communities in massive networks

(2013) Prem K. Gopalan et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Time-varying functional network information extracted from brief instances of spontaneous brain activity

(2013) Xiao Liu et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Structural and Functional Brain Networks: From Connections to Cognition

(2013) H.-J. Park et al.   SCIENCE

Multivariate Statistical Analyses for Neuroimaging Data

(2012) Anthony R. McIntosh et al.   Annual Review of Psychology

The economy of brain network organization

(2012) Ed Bullmore et al.   NATURE REVIEWS NEUROSCIENCE

On the use of correlation as a measure of network connectivity

(2012) Andrew Zalesky et al.   NEUROIMAGE

An improved framework for confound regression and filtering for control of motion artifact in the preprocessing of resting-state functional connectivity data

(2012) Theodore D. Satterthwaite et al.   NEUROIMAGE

Overlapping community detection using Bayesian non-negative matrix factorization

(2011) Ioannis Psorakis et al.   PHYSICAL REVIEW E

Narrow scope for resolution-limit-free community detection

(2011) V. A. Traag et al.   PHYSICAL REVIEW E

Dynamic reconfiguration of human brain networks during learning

(2011) D. S. Bassett et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Nipype: A Flexible, Lightweight and Extensible Neuroimaging Data Processing Framework in Python

(2011) Krzysztof Gorgolewski et al.   Frontiers in Neuroinformatics

N4ITK: Improved N3 Bias Correction

(2010) Nicholas J Tustison et al.   IEEE TRANSACTIONS ON MEDICAL IMAGING

Link communities reveal multiscale complexity in networks

(2010) Yong-Yeol Ahn et al.   NATURE

Network modelling methods for FMRI

(2010) Stephen M. Smith et al.   NEUROIMAGE

Community Structure in Time-Dependent, Multiscale, and Multiplex Networks

(2010) P. J. Mucha et al.   SCIENCE

Complex brain networks: graph theoretical analysis of structural and functional systems

(2009) Ed Bullmore et al.   NATURE REVIEWS NEUROSCIENCE

Accurate and robust brain image alignment using boundary-based registration

(2009) Douglas N. Greve et al.   NEUROIMAGE

Unbiased nonlinear average age-appropriate brain templates from birth to adulthood

(2009) VS Fonov et al.   NEUROIMAGE

Complex network measures of brain connectivity: Uses and interpretations

(2009) Mikail Rubinov et al.   NEUROIMAGE

Line graphs, link partitions, and overlapping communities

(2009) T. S. Evans et al.   PHYSICAL REVIEW E

Correspondence of the brain's functional architecture during activation and rest

(2009) S. M. Smith et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Machine learning classifiers and fMRI: A tutorial overview

(2008) Francisco Pereira et al.   NEUROIMAGE

Maps of random walks on complex networks reveal community structure

(2008) M. Rosvall et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Symmetric diffeomorphic image registration with cross-correlation: Evaluating automated labeling of elderly and neurodegenerative brain

(2007) B AVANTS et al.   MEDICAL IMAGE ANALYSIS