Microautophagy – distinct molecular mechanisms handle cargoes of many sizes

Mechanistic dissection of macro- and micronucleophagy

(2020) Florian B. Otto et al.   Autophagy

TORC1 regulates vacuole membrane composition through ubiquitin- and ESCRT-dependent microautophagy

(2020) Xi Yang et al.   JOURNAL OF CELL BIOLOGY

Lysosome biology in autophagy

(2020) Willa Wen-You Yim et al.   Cell Discovery

Microautophagy in Plants: Consideration of Its Molecular Mechanism

(2020) Katarzyna Sieńko et al.   Cells

Differential activation of eMI by distinct forms of cellular stress

(2020) Ana Mesquita et al.   Autophagy

Biological Functions of Autophagy Genes: A Disease Perspective

(2019) Beth Levine et al.   CELL

Degradation of Blos1 mRNA by IRE1 repositions lysosomes and protects cells from stress

(2019) Donghwi Bae et al.   JOURNAL OF CELL BIOLOGY

Analysis of autophagy activated during changes in carbon source availability in yeast cells

(2019) Ryo Iwama et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

TORC1 specifically inhibits microautophagy through ESCRT-0

(2019) Riko Hatakeyama et al.   CURRENT GENETICS

Diverse Cellular Roles of Autophagy

(2019) Hideaki Morishita et al.   Annual Review of Cell and Developmental Biology

rDNA Condensation Promotes rDNA Separation from Nucleolar Proteins Degraded for Nucleophagy after TORC1 Inactivation

(2019) Md. Golam Mostofa et al.   Cell Reports

TORC1 regulates ESCRT-0 complex formation on the vacuolar membrane and microautophagy induction in yeast

(2019) Shamsul Morshed et al.   BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS

The many functions of ESCRTs

(2019) Marina Vietri et al.   NATURE REVIEWS MOLECULAR CELL BIOLOGY

ESCRT-III-driven piecemeal micro-ER-phagy remodels the ER during recovery from ER stress

(2019) Marisa Loi et al.   Nature Communications

AMPK regulates ESCRT-dependent microautophagy of proteasomes concomitant with proteasome storage granule assembly during glucose starvation

(2019) Jianhui Li et al.   PLoS Genetics

Three Distinct Types of Microautophagy Based on Membrane Dynamics and Molecular Machineries

(2018) Masahide Oku et al.   BIOESSAYS

Starvation induces rapid degradation of selective autophagy receptors by endosomal microautophagy

(2018) Jakob Mejlvang et al.   JOURNAL OF CELL BIOLOGY

Selective Elimination of Membrane-Damaged Chloroplasts via Microautophagy

(2018) Sakuya Nakamura et al.   PLANT PHYSIOLOGY

An autophagy assay reveals the ESCRT-III component CHMP2A as a regulator of phagophore closure

(2018) Yoshinori Takahashi et al.   Nature Communications

Structures, Functions, and Dynamics of ESCRT-III/Vps4 Membrane Remodeling and Fission Complexes

(2018) John McCullough et al.   Annual Review of Cell and Developmental Biology

The mitochondrial phosphatidylserine decarboxylase Psd1 is involved in nitrogen starvation-induced mitophagy in yeast

(2018) Pierre Vigié et al.   JOURNAL OF CELL SCIENCE

Spatially Distinct Pools of TORC1 Balance Protein Homeostasis

(2018) Riko Hatakeyama et al.   MOLECULAR CELL

Noncanonical autophagy at ER exit sites regulates procollagen turnover

(2018) Shakib Omari et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Chaperone-mediated autophagy and endosomal microautophagy: Jointed by a chaperone

(2017) Kumsal Tekirdag et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

ESCRT-mediated vesicle concatenation in plant endosomes

(2017) Rafael Andrade Buono et al.   JOURNAL OF CELL BIOLOGY

Evidence for ESCRT- and clathrin-dependent microautophagy

(2017) Masahide Oku et al.   JOURNAL OF CELL BIOLOGY

A lysosomal switch triggers proteostasis renewal in the immortal C. elegans germ lineage

(2017) K. Adam Bohnert et al.   NATURE

Fusion and scission of membranes: Ubiquitous topological transformations in cells

(2017) Roland L. Knorr et al.   TRAFFIC

Niemann-Pick type C proteins promote microautophagy by expanding raft-like membrane domains in the yeast vacuole

(2017) Takuma Tsuji et al.   eLife

ESCRTs function directly on the lysosome membrane to downregulate ubiquitinated lysosomal membrane proteins

(2017) Lu Zhu et al.   eLife

AMPK and vacuole-associated Atg14p orchestrate μ-lipophagy for energy production and long-term survival under glucose starvation

(2017) Arnold Y Seo et al.   eLife

Recruitment dynamics of ESCRT-III and Vps4 to endosomes and implications for reverse membrane budding

(2017) Manuel Alonso Y Adell et al.   eLife

Selective endosomal microautophagy is starvation-inducible in Drosophila

(2016) Anindita Mukherjee et al.   Autophagy

An overview of macroautophagy in yeast

(2016) Xin Wen et al.   JOURNAL OF MOLECULAR BIOLOGY

Translocon component Sec62 acts in endoplasmic reticulum turnover during stress recovery

(2016) Fiorenza Fumagalli et al.   NATURE CELL BIOLOGY

Mechanistic insights into selective autophagy pathways: lessons from yeast

(2016) Jean-Claude Farré et al.   NATURE REVIEWS MOLECULAR CELL BIOLOGY

Autophagosome closure requires membrane scission

(2015) Roland L Knorr et al.   Autophagy

ESCRTs Cooperate with a Selective Autophagy Receptor to Mediate Vacuolar Targeting of Soluble Cargos

(2015) Xiao-Man Liu et al.   MOLECULAR CELL

Hsc70-4 Deforms Membranes to Promote Synaptic Protein Turnover by Endosomal Microautophagy

(2015) Valerie Uytterhoeven et al.   NEURON

The Endosomal Protein CHARGED MULTIVESICULAR BODY PROTEIN1 Regulates the Autophagic Turnover of Plastids in Arabidopsis

(2015) Christoph Spitzer et al.   PLANT CELL

Anthocyanin Vacuolar Inclusions Form by a Microautophagy Mechanism

(2015) Alexandra Chanoca et al.   PLANT CELL

Autophagosomes, phagosomes, autolysosomes, phagolysosomes, autophagolysosomes… Wait, I’m confused

(2014) Daniel J Klionsky et al.   Autophagy

Remodeling of membrane compartments: some consequences of membrane fluidity

(2014) Reinhard Lipowsky   BIOLOGICAL CHEMISTRY

Organelle Size Scaling of the Budding Yeast Vacuole Is Tuned by Membrane Trafficking Rates

(2014) Yee-Hung Mark Chan et al.   BIOPHYSICAL JOURNAL

A sterol-enriched vacuolar microdomain mediates stationary phase lipophagy in budding yeast

(2014) Chao-Wen Wang et al.   JOURNAL OF CELL BIOLOGY

ER-phagy mediates selective degradation of endoplasmic reticulum independently of the core autophagy machinery

(2014) S. Schuck et al.   JOURNAL OF CELL SCIENCE

The Biogenesis of Lysosomes and Lysosome-Related Organelles

(2014) J. P. Luzio et al.   Cold Spring Harbor Perspectives in Biology

Historical landmarks of autophagy research

(2013) Yoshinori Ohsumi   CELL RESEARCH

Phosphorylation of mitophagy and pexophagy receptors coordinates their interaction with Atg8 and Atg11

(2013) Jean-Claude Farré et al.   EMBO REPORTS

Glyceraldehyde-3-phosphate Dehydrogenase (GAPDH) Phosphorylation by Protein Kinase Cδ (PKCδ) Inhibits Mitochondria Elimination by Lysosomal-like Structures following Ischemia and Reoxygenation-induced Injury

(2013) Gouri Yogalingam et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Atg18 phosphoregulation controls organellar dynamics by modulating its phosphoinositide-binding activity

(2013) Naoki Tamura et al.   JOURNAL OF CELL BIOLOGY

Direct imaging reveals stable, micrometer-scale lipid domains that segregate proteins in live cells

(2013) Alexandre Toulmay et al.   JOURNAL OF CELL BIOLOGY

Lipid droplet autophagy in the yeast Saccharomyces cerevisiae

(2013) Tim van Zutphen et al.   MOLECULAR BIOLOGY OF THE CELL

Delivery of endosomes to lysosomes via microautophagy in the visceral endoderm of mouse embryos

(2012) Nobuyuki Kawamura et al.   Nature Communications

The Role of Atg Proteins in Autophagosome Formation

(2011) Noboru Mizushima et al.   Annual Review of Cell and Developmental Biology

Microautophagy of Cytosolic Proteins by Late Endosomes

(2011) Ranjit Sahu et al.   DEVELOPMENTAL CELL

Membrane Fusion: Five Lipids, Four SNAREs, Three Chaperones, Two Nucleotides, and a Rab, All Dancing in a Ring on Yeast Vacuoles

(2010) William Wickner   Annual Review of Cell and Developmental Biology

Microautophagy of the Nucleus Coincides with a Vacuolar Diffusion Barrier at Nuclear–Vacuolar Junctions

(2010) Rosie Dawaliby et al.   MOLECULAR BIOLOGY OF THE CELL

PpAtg30 Tags Peroxisomes for Turnover by Selective Autophagy

(2008) Jean-Claude Farré et al.   DEVELOPMENTAL CELL

Atg8 Controls Phagophore Expansion during Autophagosome Formation

(2008) Zhiping Xie et al.   MOLECULAR BIOLOGY OF THE CELL

Piecemeal Microautophagy of the Nucleus Requires the Core Macroautophagy Genes

(2008) R. Krick et al.   MOLECULAR BIOLOGY OF THE CELL