Genetic variants in root architecture-related genes in a Glycine soja accession, a potential resource to improve cultivated soybean

Identification of candidate genes involved in early iron deficiency chlorosis signaling in soybean (Glycine max) roots and leaves

(2014) Adrienne N Moran Lauter et al.   BMC GENOMICS

Major Soybean Maturity Gene Haplotypes Revealed by SNPViz Analysis of 72 Sequenced Soybean Genomes

(2014) Tiffany Langewisch et al.   PLoS One

Inheritance and QTL mapping of related root traits in soybean at the seedling stage

(2014) Huizhen Liang et al.   THEORETICAL AND APPLIED GENETICS

Genomic differences between cultivated soybean, G. max and its wild relative G. soja

(2013) Trupti Joshi et al.   BMC GENOMICS

Soybean knowledge base (SoyKB): a web resource for integration of soybean translational genomics and molecular breeding

(2013) Trupti Joshi et al.   NUCLEIC ACIDS RESEARCH

Identification of Novel Loci Regulating Interspecific Variation in Root Morphology and Cellular Development in Tomato

(2013) M. Ron et al.   PLANT PHYSIOLOGY

Introgression of Novel Traits from a Wild Wheat Relative Improves Drought Adaptation in Wheat

(2013) D. F. Placido et al.   PLANT PHYSIOLOGY

Comparative transcriptomics reveals patterns of selection in domesticated and wild tomato

(2013) D. Koenig et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Analysis of elite variety tag SNPs reveals an important allele in upland rice

(2013) Jun Lyu et al.   Nature Communications

Mendelian and Non-Mendelian Regulation of Gene Expression in Maize

(2013) Lin Li et al.   PLoS Genetics

Development and Identification of Introgression Lines from Cross of Oryza sativa and Oryza minuta

(2013) Si-bin GUO et al.   Rice Science

Plant responsiveness to root–root communication of stress cues

(2012) Omer Falik et al.   ANNALS OF BOTANY

Evaluation of rice (Oryza sativa L.) near iso-genic lines with root QTLs for plant production and root traits in rainfed target populations of environment

(2012) K.K. Suji et al.   FIELD CROPS RESEARCH

Apoplastic hydrogen peroxide in the growth zone of the maize primary root under water stress. I. Increased levels are specific to the apical region of growth maintenance

(2012) Priyamvada Voothuluru et al.   JOURNAL OF EXPERIMENTAL BOTANY

Pericentromeric Effects Shape the Patterns of Divergence, Retention, and Expression of Duplicated Genes in the Paleopolyploid Soybean

(2012) J. Du et al.   PLANT CELL

Disentangling the Intertwined Genetic Bases of Root and Shoot Growth in Arabidopsis

(2012) Marie Bouteillé et al.   PLoS One

CTR1 phosphorylates the central regulator EIN2 to control ethylene hormone signaling from the ER membrane to the nucleus in Arabidopsis

(2012) C. Ju et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Identification of positive yield QTL alleles from exotic soybean germplasm in two backcross populations

(2012) K.-S. Kim et al.   THEORETICAL AND APPLIED GENETICS

Single feature polymorphisms (SFPs) for drought tolerance in pigeonpea (Cajanus spp.)

(2011) Rachit K. Saxena et al.   FUNCTIONAL & INTEGRATIVE GENOMICS

Genome-wide atlas of transcription during maize development

(2011) Rajandeep S. Sekhon et al.   PLANT JOURNAL

Drought Resistance Improvement in Rice: An Integrated Genetic and Resource Management Strategy

(2011) Rachid Serraj et al.   PLANT PRODUCTION SCIENCE

QTL analysis of root traits as related to phosphorus efficiency in soybean

(2010) Quan Liang et al.   ANNALS OF BOTANY

Identification of shared single copy nuclear genes in Arabidopsis, Populus, Vitis and Oryza and their phylogenetic utility across various taxonomic levels

(2010) Jill M Duarte et al.   BMC EVOLUTIONARY BIOLOGY

Single feature polymorphism (SFP)-based selective sweep identification and association mapping of growth-related metabolic traits in Arabidopsis thaliana

(2010) Liam H Childs et al.   BMC GENOMICS

Global transcriptome profiling of wild soybean (Glycine soja) roots under NaHCO3 treatment

(2010) Ying Ge et al.   BMC PLANT BIOLOGY

The Genome Analysis Toolkit: A MapReduce framework for analyzing next-generation DNA sequencing data

(2010) A. McKenna et al.   GENOME RESEARCH

Root elongation, water stress, and mechanical impedance: a review of limiting stresses and beneficial root tip traits

(2010) A. Glyn Bengough et al.   JOURNAL OF EXPERIMENTAL BOTANY

Spatiotemporal regulation of cell-cycle genes by SHORTROOT links patterning and growth

(2010) R. Sozzani et al.   NATURE

Homologue structure of the SLAC1 anion channel for closing stomata in leaves

(2010) Yu-hang Chen et al.   NATURE

Genome sequence of the palaeopolyploid soybean

(2010) Jeremy Schmutz et al.   NATURE

Resequencing of 31 wild and cultivated soybean genomes identifies patterns of genetic diversity and selection

(2010) Hon-Ming Lam et al.   NATURE GENETICS

Comparative Transcriptomic Profiling of a Salt-Tolerant Wild Tomato Species and a Salt-Sensitive Tomato Cultivar

(2010) Wei Sun et al.   PLANT AND CELL PHYSIOLOGY

Whole-genome sequencing and intensive analysis of the undomesticated soybean (Glycine soja Sieb. and Zucc.) genome

(2010) M. Y. Kim et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Identification of QTL for increased fibrous roots in soybean

(2010) Hussein Abdel-Haleem et al.   THEORETICAL AND APPLIED GENETICS

Identification of a major QTL allele from wild soybean (Glycine soja Sieb. & Zucc.) for increasing alkaline salt tolerance in soybean

(2010) D. D. Tuyen et al.   THEORETICAL AND APPLIED GENETICS

Infection and genotype remodel the entire soybean transcriptome

(2009) Lecong Zhou et al.   BMC GENOMICS

Discovery and mapping of single feature polymorphisms in wheat using Affymetrix arrays

(2009) Amy N Bernardo et al.   BMC GENOMICS

Circos: An information aesthetic for comparative genomics

(2009) M. Krzywinski et al.   GENOME RESEARCH

SoyBase, the USDA-ARS soybean genetics and genomics database

(2009) David Grant et al.   NUCLEIC ACIDS RESEARCH

Evaluation of diverse soybean germplasm for root growth and architecture

(2009) Lakshmi P. Manavalan et al.   PLANT AND SOIL

QGene 4.0, an extensible Java QTL-analysis platform

(2008) R. Joehanes et al.   BIOINFORMATICS

GGT 2.0: Versatile Software for Visualization and Analysis of Genetic Data

(2008) Ralph van Berloo   JOURNAL OF HEREDITY

High-throughput functional annotation and data mining with the Blast2GO suite

(2008) S. Gotz et al.   NUCLEIC ACIDS RESEARCH