Oral microbiome and onset of oral mucositis in patients with squamous cell carcinoma of the head and neck

Periodontal pathogens are a risk factor of oral cavity squamous cell carcinoma, independent of tobacco and alcohol and human papillomavirus

(2019) Ian Ganly et al.   INTERNATIONAL JOURNAL OF CANCER

metamicrobiomeR: an R package for analysis of microbiome relative abundance data using zero-inflated beta GAMLSS and meta-analysis across studies using random effects models

(2019) Nhan Thi Ho et al.   BMC BIOINFORMATICS

A multivariate distance-based analytic framework for microbial interdependence association test in longitudinal study

(2017) Yilong Zhang et al.   GENETIC EPIDEMIOLOGY

Cohort study of oncologic emergencies in patients with head and neck cancer

(2017) Cielito C. Reyes-Gibby et al.   HEAD AND NECK-JOURNAL FOR THE SCIENCES AND SPECIALTIES OF THE HEAD AND NECK

Normalization and microbial differential abundance strategies depend upon data characteristics

(2017) Sophie Weiss et al.   Microbiome

The Potential Effect of Oral Microbiota in the Prediction of Mucositis During Radiotherapy for Nasopharyngeal Carcinoma

(2017) Xiao-Xia Zhu et al.   EBioMedicine

Host-Microbiome Cross-talk in Oral Mucositis

(2016) R.M. Vasconcelos et al.   JOURNAL OF DENTAL RESEARCH

Biochemical and genome sequence analyses of Megasphaera sp. strain DISK18 from dental plaque of a healthy individual reveals commensal lifestyle

(2016) Nayudu Nallabelli et al.   Scientific Reports

Chemotherapy-driven dysbiosis in the intestinal microbiome

(2015) E. Montassier et al.   ALIMENTARY PHARMACOLOGY & THERAPEUTICS

Management of oral and gastrointestinal mucosal injury: ESMO Clinical Practice Guidelines for diagnosis, treatment, and follow-up

(2015) D. E. Peterson et al.   ANNALS OF ONCOLOGY

An IL-23R/IL-22 Circuit Regulates Epithelial Serum Amyloid A to Promote Local Effector Th17 Responses

(2015) Teruyuki Sano et al.   CELL

Th17 Cell Induction by Adhesion of Microbes to Intestinal Epithelial Cells

(2015) Koji Atarashi et al.   CELL

Crosstalk between Microbiota-Derived Short-Chain Fatty Acids and Intestinal Epithelial HIF Augments Tissue Barrier Function

(2015) Caleb J. Kelly et al.   Cell Host & Microbe

Impact of weight loss in patients with head and neck carcinoma undergoing radiotherapy: is it an underestimated phenomenon? A radiation oncologist’s perspective

(2015) J Cacicedo et al.   EUROPEAN JOURNAL OF CLINICAL NUTRITION

Compositional and gastrointestinal prokinetic studies of Pugionium (L.)

(2015) Haoyu Li et al.   FOOD CHEMISTRY

Microbiome, Metagenomics, and High-Dimensional Compositional Data Analysis

(2015) Hongzhe Li   Annual Review of Statistics and Its Application

The Relationship ofPrevotella intermedia, Prevotella nigrescensandPrevotella melaninogenicain the Supragingival Plaque of Children, Caries and Oral Malodor

(2015) Shoji Tanaka et al.   Journal of Clinical Pediatric Dentistry

Impact of Asymptomatic Herpes Simplex Virus Type 2 Infection on Mucosal Homing and Immune Cell Subsets in the Blood and Female Genital Tract

(2014) B. Shannon et al.   JOURNAL OF IMMUNOLOGY

16S rRNA Gene Pyrosequencing Reveals Shift in Patient Faecal Microbiota During High-Dose Chemotherapy as Conditioning Regimen for Bone Marrow Transplantation

(2014) Emmanuel Montassier et al.   MICROBIAL ECOLOGY

Phase II multicenter trial of Caphosol for the reduction of mucositis in patients receiving radiation therapy for head and neck cancer

(2014) Nikhil G. Rao et al.   ORAL ONCOLOGY

Waste Not, Want Not: Why Rarefying Microbiome Data Is Inadmissible

(2014) Paul J. McMurdie et al.   PLoS Computational Biology

Emerging roles of the microbiome in cancer

(2013) S. J. Bultman   CARCINOGENESIS

UPARSE: highly accurate OTU sequences from microbial amplicon reads

(2013) Robert C Edgar   NATURE METHODS

The Dental Plaque Microbiome in Health and Disease

(2013) Scott N. Peterson et al.   PLoS One

phyloseq: An R Package for Reproducible Interactive Analysis and Graphics of Microbiome Census Data

(2013) Paul J. McMurdie et al.   PLoS One

Comparative Genome Analysis of Megasphaera sp. Reveals Niche Specialization and Its Potential Role in the Human Gut

(2013) Sudarshan Anand Shetty et al.   PLoS One

Intestinal Domination and the Risk of Bacteremia in Patients Undergoing Allogeneic Hematopoietic Stem Cell Transplantation

(2012) Ying Taur et al.   CLINICAL INFECTIOUS DISEASES

smcure: An R-package for estimating semiparametric mixture cure models

(2012) Chao Cai et al.   COMPUTER METHODS AND PROGRAMS IN BIOMEDICINE

Granulicatella infection: diagnosis and management

(2012) J. S. Cargill et al.   JOURNAL OF MEDICAL MICROBIOLOGY

A framework for human microbiome research

(2012)   NATURE

Structure, function and diversity of the healthy human microbiome

(2012)   NATURE

The SILVA ribosomal RNA gene database project: improved data processing and web-based tools

(2012) Christian Quast et al.   NUCLEIC ACIDS RESEARCH

Chapter 12: Human Microbiome Analysis

(2012) Xochitl C. Morgan et al.   PLoS Computational Biology

Search and clustering orders of magnitude faster than BLAST

(2010) Robert C. Edgar   BIOINFORMATICS

The Human Oral Microbiome

(2010) F. E. Dewhirst et al.   JOURNAL OF BACTERIOLOGY

Cardiobacterium valvarum infective endocarditis and phenotypic/molecular characterization of 11 Cardiobacterium species strains

(2010) M. Chen et al.   JOURNAL OF MEDICAL MICROBIOLOGY

The Role of Intestinal Microbiota in the Development and Severity of Chemotherapy-Induced Mucositis

(2010) Michel J. van Vliet et al.   PLoS Pathogens

Radiation-induced Xerostomia: Pathophysiology, Prevention and Treatment

(2009) S.A. Bhide et al.   CLINICAL ONCOLOGY