标题
Architectural RNA in chromatin organization
作者
关键词
-
出版物
BIOCHEMICAL SOCIETY TRANSACTIONS
Volume -, Issue -, Pages -
出版商
Portland Press Ltd.
发表日期
2020-09-08
DOI
10.1042/bst20191226
参考文献
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注意:仅列出部分参考文献,下载原文获取全部文献信息。- Mouse Heterochromatin Adopts Digital Compaction States without Showing Hallmarks of HP1-Driven Liquid-Liquid Phase Separation
- (2020) Fabian Erdel et al. MOLECULAR CELL
- RNA-Induced Conformational Switching and Clustering of G3BP Drive Stress Granule Assembly by Condensation
- (2020) Jordina Guillén-Boixet et al. CELL
- RIC-seq for global in situ profiling of RNA–RNA spatial interactions
- (2020) Zhaokui Cai et al. NATURE
- Deciphering Hi-C: from 3D genome to function
- (2019) Siyuan Kong et al. CELL BIOLOGY AND TOXICOLOGY
- The role of transcription in shaping the spatial organization of the genome
- (2019) Bas van Steensel et al. NATURE REVIEWS MOLECULAR CELL BIOLOGY
- Phase separation of Polycomb-repressive complex 1 is governed by a charged disordered region of CBX2
- (2019) Aaron J. Plys et al. GENES & DEVELOPMENT
- GRID-seq for comprehensive analysis of global RNA–chromatin interactions
- (2019) Bing Zhou et al. Nature Protocols
- Differential contribution of steady‐state RNA and active transcription in chromatin organization
- (2019) A Rasim Barutcu et al. EMBO REPORTS
- Distinct Classes of Chromatin Loops Revealed by Deletion of an RNA-Binding Region in CTCF
- (2019) Anders S. Hansen et al. MOLECULAR CELL
- RNA Interactions Are Essential for CTCF-Mediated Genome Organization
- (2019) Ricardo Saldaña-Meyer et al. MOLECULAR CELL
- Xist RNA in action: Past, present, and future
- (2019) Agnese Loda et al. PLoS Genetics
- The Nuclear Matrix Protein SAFB Cooperates with Major Satellite RNAs to Stabilize Heterochromatin Architecture Partially through Phase Separation
- (2019) Xiangru Huo et al. MOLECULAR CELL
- HP1 reshapes nucleosome core to promote phase separation of heterochromatin
- (2019) S. Sanulli et al. NATURE
- Enhancer LncRNAs Influence Chromatin Interactions in Different Ways
- (2019) Yue Hou et al. Frontiers in Genetics
- Dosage Compensation of the X Chromosome: A Complex Epigenetic Assignment Involving Chromatin Regulators and Long Noncoding RNAs
- (2018) Maria Samata et al. Annual Review of Biochemistry
- Unexpected conformational variations of the human centromeric chromatin complex
- (2018) Jitendra Thakur et al. GENES & DEVELOPMENT
- Structural Basis of Heterochromatin Formation by Human HP1
- (2018) Shinichi Machida et al. MOLECULAR CELL
- RNA self-assembly contributes to stress granule formation and defining the stress granule transcriptome
- (2018) Briana Van Treeck et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- RNA buffers the phase separation behavior of prion-like RNA binding proteins
- (2018) Shovamayee Maharana et al. SCIENCE
- Phase separated microenvironments inside the cell nucleus are linked to disease and regulate epigenetic state, transcription and RNA processing
- (2018) Iain A. Sawyer et al. SEMINARS IN CELL & DEVELOPMENTAL BIOLOGY
- Nuclear condensates of the Polycomb protein chromobox 2 (CBX2) assemble through phase separation
- (2018) Roubina Tatavosian et al. JOURNAL OF BIOLOGICAL CHEMISTRY
- Phase separation drives heterochromatin domain formation
- (2017) Amy R. Strom et al. NATURE
- Liquid droplet formation by HP1α suggests a role for phase separation in heterochromatin
- (2017) Adam G. Larson et al. NATURE
- The functions and unique features of long intergenic non-coding RNA
- (2017) Julia D. Ransohoff et al. NATURE REVIEWS MOLECULAR CELL BIOLOGY
- Regulatory feedback from nascent RNA to chromatin and transcription
- (2017) Lenka Skalska et al. NATURE REVIEWS MOLECULAR CELL BIOLOGY
- RNA-DamID reveals cell-type-specific binding of roX RNAs at chromatin-entry sites
- (2017) Seth W. Cheetham et al. NATURE STRUCTURAL & MOLECULAR BIOLOGY
- XIST RNA: a window into the broader role of RNA in nuclear chromosome architecture
- (2017) K. M. Creamer et al. PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES
- AI in Action: Combing the genome for the roots of autism
- (2017) Elizabeth Pennisi SCIENCE
- RNA-DamID reveals cell-type-specific binding of roX RNAs at chromatin-entry sites
- (2017) Seth W. Cheetham et al. NATURE STRUCTURAL & MOLECULAR BIOLOGY
- Modular function of long noncoding RNA, COLDAIR, in the vernalization response
- (2017) Dong-Hwan Kim et al. PLoS Genetics
- Impact of nucleic acid and methylated H3K9 binding activities of Suv39h1 on its heterochromatin assembly
- (2017) Atsuko Shirai et al. eLife
- An efficient targeted nuclease strategy for high-resolution mapping of DNA binding sites
- (2017) Peter J Skene et al. eLife
- RNA-dependent stabilization of SUV39H1 at constitutive heterochromatin
- (2017) Whitney L Johnson et al. eLife
- Architectural RNAs (arcRNAs): A class of long noncoding RNAs that function as the scaffold of nuclear bodies
- (2016) Takeshi Chujo et al. Biochimica et Biophysica Acta-Gene Regulatory Mechanisms
- Structure of centromere chromatin: from nucleosome to chromosomal architecture
- (2016) Thomas Schalch et al. CHROMOSOMA
- CENPT bridges adjacent CENPA nucleosomes on young human α-satellite dimers
- (2016) Jitendra Thakur et al. GENOME RESEARCH
- CAT7 and cat7l Long Non-coding RNAs Tune Polycomb Repressive Complex 1 Function during Human and Zebrafish Development
- (2016) Mridula K. Ray et al. JOURNAL OF BIOLOGICAL CHEMISTRY
- Super-resolution imaging reveals distinct chromatin folding for different epigenetic states
- (2016) Alistair N. Boettiger et al. NATURE
- Long non-coding RNAs: spatial amplifiers that control nuclear structure and gene expression
- (2016) Jesse M. Engreitz et al. NATURE REVIEWS MOLECULAR CELL BIOLOGY
- Classification and characterization of human endogenous retroviruses; mosaic forms are common
- (2016) Laura Vargiu et al. Retrovirology
- CRISPRi-based genome-scale identification of functional long noncoding RNA loci in human cells
- (2016) S. John Liu et al. SCIENCE
- Auxin/AID versus conventional knockouts: distinguishing the roles of CENP-T/W in mitotic kinetochore assembly and stability
- (2016) Laura Wood et al. Open Biology
- Nucleophosmin integrates within the nucleolus via multi-modal interactions with proteins displaying R-rich linear motifs and rRNA
- (2016) Diana M Mitrea et al. eLife
- Regulation of the ESC transcriptome by nuclear long noncoding RNAs
- (2015) Jan H. Bergmann et al. GENOME RESEARCH
- Locus-Specific Targeting to the X Chromosome Revealed by the RNA Interactome of CTCF
- (2015) Johnny T. Kung et al. MOLECULAR CELL
- CTCF establishes discrete functional chromatin domains at theHoxclusters during differentiation
- (2015) Varun Narendra et al. SCIENCE
- Heterochromatin-associated interactions of Drosophila HP1a with dADD1, HIPP1, and repetitive RNAs
- (2014) A. A. Alekseyenko et al. GENES & DEVELOPMENT
- CTCF regulates the human p53 gene through direct interaction with its natural antisense transcript, Wrap53
- (2014) R. Saldana-Meyer et al. GENES & DEVELOPMENT
- Human Heterochromatin Protein 1α Promotes Nucleosome Associations That Drive Chromatin Condensation
- (2014) Abdelhamid M. Azzaz et al. JOURNAL OF BIOLOGICAL CHEMISTRY
- The Long Noncoding RNAs NEAT1 and MALAT1 Bind Active Chromatin Sites
- (2014) Jason A. West et al. MOLECULAR CELL
- CTCF: an architectural protein bridging genome topology and function
- (2014) Chin-Tong Ong et al. NATURE REVIEWS GENETICS
- Topological organization of multichromosomal regions by the long intergenic noncoding RNA Firre
- (2014) Ezgi Hacisuleyman et al. NATURE STRUCTURAL & MOLECULAR BIOLOGY
- The Centromere: Epigenetic Control of Chromosome Segregation during Mitosis
- (2014) Frederick G. Westhorpe et al. Cold Spring Harbor Perspectives in Biology
- Architectural Protein Subclasses Shape 3D Organization of Genomes during Lineage Commitment
- (2013) Jennifer E. Phillips-Cremins et al. CELL
- Role of small nuclear RNAs in eukaryotic gene expression
- (2013) Saba Valadkhan et al. Essays in Biochemistry
- Suv4-20h2 mediates chromatin compaction and is important for cohesin recruitment to heterochromatin
- (2013) M. Hahn et al. GENES & DEVELOPMENT
- Functional roles of enhancer RNAs for oestrogen-dependent transcriptional activation
- (2013) Wenbo Li et al. NATURE
- High-resolution Xist binding maps reveal two-step spreading during X-chromosome inactivation
- (2013) Matthew D. Simon et al. NATURE
- Activating RNAs associate with Mediator to enhance chromatin architecture and transcription
- (2013) Fan Lai et al. NATURE
- Natural RNA circles function as efficient microRNA sponges
- (2013) Thomas B. Hansen et al. NATURE
- Exploring the three-dimensional organization of genomes: interpreting chromatin interaction data
- (2013) Job Dekker et al. NATURE REVIEWS GENETICS
- The Xist lncRNA Exploits Three-Dimensional Genome Architecture to Spread Across the X Chromosome
- (2013) J. M. Engreitz et al. SCIENCE
- Getting RNA and Protein in Phase
- (2012) Stephanie C. Weber et al. CELL
- Topological domains in mammalian genomes identified by analysis of chromatin interactions
- (2012) Jesse R. Dixon et al. NATURE
- Compaction of chromatin by diverse Polycomb group proteins requires localized regions of high charge
- (2011) D. J. Grau et al. GENES & DEVELOPMENT
- A scaffold for X chromosome inactivation
- (2011) Anna Tattermusch et al. HUMAN GENETICS
- Chromodomain-Mediated Oligomerization of HP1 Suggests a Nucleosome-Bridging Mechanism for Heterochromatin Assembly
- (2011) Daniele Canzio et al. MOLECULAR CELL
- A long noncoding RNA maintains active chromatin to coordinate homeotic gene expression
- (2011) Kevin C. Wang et al. NATURE
- Nucleation of nuclear bodies by RNA
- (2011) Sergey P. Shevtsov et al. NATURE CELL BIOLOGY
- The Xist RNA A-repeat comprises a novel AUCG tetraloop fold and a platform for multimerization
- (2011) M. M. Duszczyk et al. RNA
- Biogenesis and function of nuclear bodies
- (2011) Yuntao S. Mao et al. TRENDS IN GENETICS
- Heterochromatin maintenance and establishment: Lessons from the mouse pericentromere
- (2011) Geneviève Almouzni et al. Nucleus
- RNAi-dependent formation of heterochromatin and its diverse functions
- (2010) Shiv IS Grewal CURRENT OPINION IN GENETICS & DEVELOPMENT
- A three-dimensional model of the yeast genome
- (2010) Zhijun Duan et al. NATURE
- Direct visualization of the co-transcriptional assembly of a nuclear body by noncoding RNAs
- (2010) Yuntao S. Mao et al. NATURE CELL BIOLOGY
- roX RNAs: Non-coding regulators of the male X chromosome in flies
- (2010) Ibrahim Ilik et al. RNA Biology
- Long Noncoding RNA as Modular Scaffold of Histone Modification Complexes
- (2010) M.-C. Tsai et al. SCIENCE
- Major Evolutionary Transitions in Centromere Complexity
- (2009) Harmit S. Malik et al. CELL
- CTCF: Master Weaver of the Genome
- (2009) Jennifer E. Phillips et al. CELL
- Paraspeckles: nuclear bodies built on long noncoding RNA
- (2009) Charles S. Bond et al. JOURNAL OF CELL BIOLOGY
- RNA turnover and chromatin-dependent gene silencing
- (2008) Marc Bühler CHROMOSOMA
- Kcnq1ot1 Antisense Noncoding RNA Mediates Lineage-Specific Transcriptional Silencing through Chromatin-Level Regulation
- (2008) Radha Raman Pandey et al. MOLECULAR CELL
- Heterochromatin and RNAi Are Required to Establish CENP-A Chromatin at Centromeres
- (2008) H. D. Folco et al. SCIENCE
- The Air Noncoding RNA Epigenetically Silences Transcription by Targeting G9a to Chromatin
- (2008) T. Nagano et al. SCIENCE
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