Analysis of the TGFβ-induced program in primary airway epithelial cells shows essential role of NF-κB/RelA signaling network in type II epithelial mesenchymal transition
出版年份 2015 全文链接
标题
Analysis of the TGFβ-induced program in primary airway epithelial cells shows essential role of NF-κB/RelA signaling network in type II epithelial mesenchymal transition
作者
关键词
Epithelial mesenchymal transition, Transforming growth factor β, Nuclear factor κB, RNA-Seq, Generalized linear modeling, Transcription factor enrichment
出版物
BMC GENOMICS
Volume 16, Issue 1, Pages -
出版商
Springer Nature
发表日期
2015-07-17
DOI
10.1186/s12864-015-1707-x
参考文献
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注意：仅列出部分参考文献，下载原文获取全部文献信息。- Inferring Genome-Wide Functional Modulatory Network: A Case Study on NF-κB/RelA Transcription Factor
- (2015) Xueling Li et al. JOURNAL OF COMPUTATIONAL BIOLOGY
- Modulation of Gene Expression Regulated by the Transcription Factor NF-κB/RelA
- (2014) Xueling Li et al. JOURNAL OF BIOLOGICAL CHEMISTRY
- Molecular mechanisms of epithelial–mesenchymal transition
- (2014) Samy Lamouille et al. NATURE REVIEWS MOLECULAR CELL BIOLOGY
- TFAP2C governs the luminal epithelial phenotype in mammary development and carcinogenesis
- (2014) A R Cyr et al. ONCOGENE
- Trim28 Contributes to EMT via Regulation of E-Cadherin and N-Cadherin in Lung Cancer Cell Lines
- (2014) Lu Chen et al. PLoS One
- Systems biology approaches to understanding Epithelial Mesenchymal Transition (EMT) in mucosal remodeling and signaling in asthma
- (2014) Talha Ijaz et al. World Allergy Organization Journal
- PAVIS: a tool for Peak Annotation and Visualization
- (2013) Weichun Huang et al. BIOINFORMATICS
- SOX2 promotes tumor metastasis by stimulating epithelial-to-mesenchymal transition via regulation of WNT/β-catenin signal network
- (2013) Xuefei Li et al. CANCER LETTERS
- ERK1/2 Blockade Prevents Epithelial-Mesenchymal Transition in Lung Cancer Cells and Promotes Their Sensitivity to EGFR Inhibition
- (2013) J. M. Buonato et al. CANCER RESEARCH
- Dioxin Receptor Expression Inhibits Basal and Transforming Growth Factor β-induced Epithelial-to-mesenchymal Transition
- (2013) Eva M. Rico-Leo et al. JOURNAL OF BIOLOGICAL CHEMISTRY
- Inducible Tumor Necrosis Factor (TNF) Receptor-associated Factor-1 Expression Couples the Canonical to the Non-canonical NF-κB Pathway in TNF Stimulation
- (2013) Sanjeev Choudhary et al. JOURNAL OF BIOLOGICAL CHEMISTRY
- CDK9-Dependent Transcriptional Elongation in the Innate Interferon-Stimulated Gene Response to Respiratory Syncytial Virus Infection in Airway Epithelial Cells
- (2013) B. Tian et al. JOURNAL OF VIROLOGY
- CTNNB1 in Mesenchyme Regulates Epithelial Cell Differentiation during Müllerian Duct and Postnatal Uterine Development
- (2013) C. Allison Stewart et al. MOLECULAR ENDOCRINOLOGY
- A probabilistic approach to learn chromatin architecture and accurate inference of the NF-κB/RelA regulatory network using ChIP-Seq
- (2013) Jun Yang et al. NUCLEIC ACIDS RESEARCH
- p63 Attenuates Epithelial to Mesenchymal Potential in an Experimental Prostate Cell Model
- (2013) Jan Roger Olsen et al. PLoS One
- miR-23a Targets Interferon Regulatory Factor 1 and Modulates Cellular Proliferation and Paclitaxel-Induced Apoptosis in Gastric Adenocarcinoma Cells
- (2013) Xue Liu et al. PLoS One
- Critical Roles of p53 in Epithelial-Mesenchymal Transition and Metastasis of Hepatocellular Carcinoma Cells
- (2013) Zheng Wang et al. PLoS One
- Loss of corepressor PER2 under hypoxia up-regulates OCT1-mediated EMT gene expression and enhances tumor malignancy
- (2013) W. W. Hwang-Verslues et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Systems Approaches to Modeling Chronic Mucosal Inflammation
- (2013) Mridul Kalita et al. Biomed Research International
- TopHat2: accurate alignment of transcriptomes in the presence of insertions, deletions and gene fusions
- (2013) Daehwan Kim et al. GENOME BIOLOGY
- Epithelial-Mesenchymal Transition Induced by TNF- Requires NF- B-Mediated Transcriptional Upregulation of Twist1
- (2012) C.-W. Li et al. CANCER RESEARCH
- TGF-β signaling and epithelial–mesenchymal transition in cancer progression
- (2012) Yoko Katsuno et al. CURRENT OPINION IN ONCOLOGY
- The p63 Protein Isoform ΔNp63α Inhibits Epithelial-Mesenchymal Transition in Human Bladder Cancer Cells
- (2012) Mai N. Tran et al. JOURNAL OF BIOLOGICAL CHEMISTRY
- E-cadherin inhibits nuclear accumulation of Nrf2: implications for chemoresistance of cancer cells
- (2012) W. D. Kim et al. JOURNAL OF CELL SCIENCE
- Early events in cell adhesion and polarity during epithelial-mesenchymal transition
- (2012) R. Y.-J. Huang et al. JOURNAL OF CELL SCIENCE
- Elf5 inhibits the epithelial–mesenchymal transition in mammary gland development and breast cancer metastasis by transcriptionally repressing Snail2
- (2012) Rumela Chakrabarti et al. NATURE CELL BIOLOGY
- The airway epithelium in asthma
- (2012) Bart N Lambrecht et al. NATURE MEDICINE
- Fast gapped-read alignment with Bowtie 2
- (2012) Ben Langmead et al. NATURE METHODS
- TGF-β and NF-κB signal pathway cross-talk is mediated through TAK1 and SMAD7 in a subset of head and neck cancers
- (2012) C Freudlsperger et al. ONCOGENE
- aV integrins and TGF-β-induced EMT: a circle of regulation
- (2011) Fahmy A. Mamuya et al. JOURNAL OF CELLULAR AND MOLECULAR MEDICINE
- p53 regulates epithelial–mesenchymal transition and stem cell properties through modulating miRNAs
- (2011) Chun-Ju Chang et al. NATURE CELL BIOLOGY
- Genome-scale epigenetic reprogramming during epithelial-to-mesenchymal transition
- (2011) Oliver G McDonald et al. NATURE STRUCTURAL & MOLECULAR BIOLOGY
- ChEA: transcription factor regulation inferred from integrating genome-wide ChIP-X experiments
- (2010) Alexander Lachmann et al. BIOINFORMATICS
- ERβ Impedes Prostate Cancer EMT by Destabilizing HIF-1α and Inhibiting VEGF-Mediated Snail Nuclear Localization: Implications for Gleason Grading
- (2010) Paul Mak et al. CANCER CELL
- Requirement of the NF-κB Subunit p65/RelA for K-Ras–Induced Lung Tumorigenesis
- (2010) Daniela S. Bassères et al. CANCER RESEARCH
- A systems view of epithelial–mesenchymal transition signaling states
- (2010) Stuart Thomson et al. CLINICAL & EXPERIMENTAL METASTASIS
- edgeR: a Bioconductor package for differential expression analysis of digital gene expression data
- (2009) M. D. Robinson et al. BIOINFORMATICS
- The basics of epithelial-mesenchymal transition
- (2009) Raghu Kalluri et al. JOURNAL OF CLINICAL INVESTIGATION
- A SNAIL1–SMAD3/4 transcriptional repressor complex promotes TGF-β mediated epithelial–mesenchymal transition
- (2009) Theresa Vincent et al. NATURE CELL BIOLOGY
- RelA Ser276 Phosphorylation Is Required for Activation of a Subset of NF- B-Dependent Genes by Recruiting Cyclin-Dependent Kinase 9/Cyclin T1 Complexes
- (2008) D. E. Nowak et al. MOLECULAR AND CELLULAR BIOLOGY
- Polycomb Complex 2 Is Required for E-cadherin Repression by the Snail1 Transcription Factor
- (2008) N. Herranz et al. MOLECULAR AND CELLULAR BIOLOGY
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