Transcriptomic Analysis Revealed the Common and Divergent Responses of Maize Seedling Leaves to Cold and Heat Stresses

A Comprehensive Transcriptomics Analysis Reveals Long Non-Coding RNA to be Involved in the Key Metabolic Pathway in Response to Waterlogging Stress in Maize

(2020) Feng Yu et al.   Genes

Plant abiotic stress response and nutrient use efficiency

(2020) Zhizhong Gong et al.   Science China-Life Sciences

Transcriptomic analysis of the maize (Zea mays L.) inbred line B73 response to heat stress at the seedling stage

(2019) Yexiong Qian et al.   GENE

A group VII ethylene response factor gene, ZmEREB180 , coordinates waterlogging tolerance in maize seedlings

(2019) Feng Yu et al.   PLANT BIOTECHNOLOGY JOURNAL

Genome-Wide Transcript and Small RNA Profiling Reveals Transcriptomic Responses to Heat Stress

(2019) Juan He et al.   PLANT PHYSIOLOGY

Advances and current challenges in calcium signaling

(2018) Jörg Kudla et al.   NEW PHYTOLOGIST

Cold signaling in plants: Insights into mechanisms and regulation

(2018) Xiaoyu Guo et al.   Journal of Integrative Plant Biology

Transcriptional Regulatory Network of Plant Heat Stress Response

(2017) Naohiko Ohama et al.   TRENDS IN PLANT SCIENCE

Transcriptomic Profiling of the Maize (Zea mays L.) Leaf Response to Abiotic Stresses at the Seedling Stage

(2017) Pengcheng Li et al.   Frontiers in Plant Science

Abiotic Stress Signaling and Responses in Plants

(2016) Jian-Kang Zhu   CELL

Brassinosteroids participate in the control of basal and acquired freezing tolerance of plants

(2016) Marina Eremina et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Low temperature caused modifications in the arrangement of cell wall pectins due to changes of osmotic potential of cells of maize leaves (Zea mays L.)

(2016) Anna Bilska-Kos et al.   PROTOPLASMA

Transcriptome Sequencing Identified Genes and Gene Ontologies Associated with Early Freezing Tolerance in Maize

(2016) Zhao Li et al.   Frontiers in Plant Science

HISAT: a fast spliced aligner with low memory requirements

(2015) Daehwan Kim et al.   NATURE METHODS

The Arabidopsis RCC1 Family Protein TCF1 Regulates Freezing Tolerance and Cold Acclimation through Modulating Lignin Biosynthesis

(2015) Hongtao Ji et al.   PLoS Genetics

Making better maize plants for sustainable grain production in a changing climate

(2015) Fangping Gong et al.   Frontiers in Plant Science

HTSeq--a Python framework to work with high-throughput sequencing data

(2014) S. Anders et al.   BIOINFORMATICS

Trimmomatic: a flexible trimmer for Illumina sequence data

(2014) Anthony M. Bolger et al.   BIOINFORMATICS

Cold Signal Transduction and its Interplay with Phytohormones During Cold Acclimation

(2014) Yiting Shi et al.   PLANT AND CELL PHYSIOLOGY

The Protein Phosphatase RCF2 and Its Interacting Partner NAC019 Are Critical for Heat Stress-Responsive Gene Regulation and Thermotolerance in Arabidopsis

(2014) Q. Guan et al.   PLANT CELL

Genome-wide transcriptomic analysis of response to low temperature reveals candidate genes determining divergent cold-sensitivity of maize inbred lines

(2014) Alicja Sobkowiak et al.   PLANT MOLECULAR BIOLOGY

Stress sensing in plants by an ER stress sensor/transducer, bZIP28

(2014) Renu Srivastava et al.   Frontiers in Plant Science

Transcriptomics in the RNA-seq era

(2013) Paul A McGettigan   CURRENT OPINION IN CHEMICAL BIOLOGY

clusterProfiler: an R Package for Comparing Biological Themes Among Gene Clusters

(2012) Guangchuang Yu et al.   OMICS-A JOURNAL OF INTEGRATIVE BIOLOGY

Ethylene Signaling Negatively Regulates Freezing Tolerance by Repressing Expression ofCBFand Type-AARRGenes inArabidopsis

(2012) Yiting Shi et al.   PLANT CELL

Expression of selected heat shock proteins after individually applied and combined drought and heat stress

(2011) Biliana Grigorova et al.   ACTA PHYSIOLOGIAE PLANTARUM

A European perspective on maize history

(2011) Maud Irène Tenaillon et al.   COMPTES RENDUS BIOLOGIES

Ubiquitin and Ubiquitin-like Modifiers in Plants

(2011) Hee Jin Park et al.   JOURNAL OF PLANT BIOLOGY

Arabidopsis HsfA1 transcription factors function as the main positive regulators in heat shock-responsive gene expression

(2011) Takumi Yoshida et al.   MOLECULAR GENETICS AND GENOMICS

Crosstalk between Hsp90 and Hsp70 Chaperones and Heat Stress Transcription Factors in Tomato

(2011) Alexander Hahn et al.   PLANT CELL

The role of class A1 heat shock factors (HSFA1s) in response to heat and other stresses in Arabidopsis

(2011) HSIANG-CHIN LIU et al.   PLANT CELL AND ENVIRONMENT

Characterization of Small Heat Shock Proteins Associated with Maize Tolerance to Combined Drought and Heat Stress

(2010) Xiuli Hu et al.   JOURNAL OF PLANT GROWTH REGULATION

Differential expression analysis for sequence count data

(2010) Simon Anders et al.   GENOME BIOLOGY

The Heat Shock Response in Moss Plants Is Regulated by Specific Calcium-Permeable Channels in the Plasma Membrane

(2009) Y. Saidi et al.   PLANT CELL

Substrate binding site flexibility of the small heat shock protein molecular chaperones

(2009) N. Jaya et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

WGCNA: an R package for weighted correlation network analysis

(2008) Peter Langfelder et al.   BMC BIOINFORMATICS

Proteomics applied on plant abiotic stresses: Role of heat shock proteins (HSP)

(2008) Anna Maria Timperio et al.   Journal of Proteomics

The Cold-Inducible CBF1 Factor-Dependent Signaling Pathway Modulates the Accumulation of the Growth-Repressing DELLA Proteins via Its Effect on Gibberellin Metabolism

(2008) P. Achard et al.   PLANT CELL