Cross-feeding modulates the rate and mechanism of antibiotic resistance evolution in a model microbial community of Escherichia coli and Salmonella enterica

Bacterial adaptation is constrained in complex communities

(2020) Thomas Scheuerl et al.   Nature Communications

Bacterial interspecies interactions modulate pH-mediated antibiotic tolerance

(2020) Andrés Aranda-Díaz et al.   eLife

Selection for antimicrobial resistance is reduced when embedded in a natural microbial community

(2019) Uli Klümper et al.   ISME Journal

Lytic bacteriophage have diverse indirect effects in a synthetic cross-feeding community

(2019) Lisa Fazzino et al.   ISME Journal

Cooperation, competition and antibiotic resistance in bacterial colonies

(2018) Isabel Frost et al.   ISME Journal

Cross-feeding modulates antibiotic tolerance in bacterial communities

(2018) Elizabeth M. Adamowicz et al.   ISME Journal

Ecology and evolution of metabolic cross-feeding interactions in bacteria

(2018) Glen D'Souza et al.   NATURAL PRODUCT REPORTS

Modifying and reacting to the environmental pH can drive bacterial interactions

(2018) Christoph Ratzke et al.   PLOS BIOLOGY

Community interactions and spatial structure shape selection on antibiotic resistant lineages

(2018) Sylvie Estrela et al.   PLoS Computational Biology

Novel Insights into Selection for Antibiotic Resistance in Complex Microbial Communities

(2018) Aimee K. Murray et al.   mBio

A coexistence theory in microbial communities

(2018) Marina Dohi et al.   Royal Society Open Science

A shared limiting resource leads to competitive exclusion in a cross-feeding system

(2018) Sarah P. Hammarlund et al.   ENVIRONMENTAL MICROBIOLOGY

Antibiotic Resistance Mechanisms in Bacteria: Relationships Between Resistance Determinants of Antibiotic Producers, Environmental Bacteria, and Clinical Pathogens

(2018) Elizabeth Peterson et al.   Frontiers in Microbiology

Experimental evolution and the dynamics of adaptation and genome evolution in microbial populations

(2017) Richard E Lenski   ISME Journal

Mutation and Suppressor Analysis of the Essential Lipopolysaccharide Transport Protein LptA Reveals Strategies To Overcome Severe Outer Membrane Permeability Defects in Escherichia coli

(2017) Federica A. Falchi et al.   JOURNAL OF BACTERIOLOGY

Maintenance of Microbial Cooperation Mediated by Public Goods in Single- and Multiple-Trait Scenarios

(2017) Özhan Özkaya et al.   JOURNAL OF BACTERIOLOGY

Metabolic constraints on the evolution of antibiotic resistance

(2017) Mattia Zampieri et al.   Molecular Systems Biology

Next-generation approaches to understand and combat the antibiotic resistome

(2017) Terence S. Crofts et al.   NATURE REVIEWS MICROBIOLOGY

A Specialized Peptidoglycan Synthase Promotes Salmonella Cell Division inside Host Cells

(2017) Sónia Castanheira et al.   mBio

Roles of Regulatory RNAs for Antibiotic Resistance in Bacteria and Their Potential Value as Novel Drug Targets

(2017) Petra Dersch et al.   Frontiers in Microbiology

Byproduct Cross Feeding and Community Stability in an In Silico Biofilm Model of the Gut Microbiome

(2017) Michael Henson et al.   Processes

Distinguishing between resistance, tolerance and persistence to antibiotic treatment

(2016) Asher Brauner et al.   NATURE REVIEWS MICROBIOLOGY

Antibiotic resistance in the wild: an eco-evolutionary perspective

(2016) Teppo Hiltunen et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Oscillatory dynamics in a bacterial cross-protection mutualism

(2016) Eugene Anatoly Yurtsev et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Collective Resistance in Microbial Communities by Intracellular Antibiotic Deactivation

(2016) Robin A. Sorg et al.   PLOS BIOLOGY

Resource Availability Modulates the Cooperative and Competitive Nature of a Microbial Cross-Feeding Mutualism

(2016) Tim A. Hoek et al.   PLOS BIOLOGY

Population Density Modulates Drug Inhibition and Gives Rise to Potential Bistability of Treatment Outcomes for Bacterial Infections

(2016) Jason Karslake et al.   PLoS Computational Biology

Pervasive Selection for Cooperative Cross-Feeding in Bacterial Communities

(2016) Sebastian Germerodt et al.   PLoS Computational Biology

Privatization of cooperative benefits stabilizes mutualistic cross-feeding interactions in spatially structured environments

(2015) Samay Pande et al.   ISME Journal

Live to cheat another day: bacterial dormancy facilitates the social exploitation of β-lactamases

(2015) Frances Medaney et al.   ISME Journal

How competition governs whether moderate or aggressive treatment minimizes antibiotic resistance

(2015) Caroline Colijn et al.   eLife

Metallo-β-Lactamase-Producing Bacteroides Species Can Shield Other Members of the Gut Microbiota from Antibiotics

(2014) Usha Stiefel et al.   ANTIMICROBIAL AGENTS AND CHEMOTHERAPY

LESS IS MORE: SELECTIVE ADVANTAGES CAN EXPLAIN THE PREVALENT LOSS OF BIOSYNTHETIC GENES IN BACTERIA

(2014) Glen D'Souza et al.   EVOLUTION

Resistance to β-Lactam Antibiotics Conferred by Point Mutations in Penicillin-Binding Proteins PBP3, PBP4 and PBP6 in Salmonella enterica

(2014) Song Sun et al.   PLoS One

Aerial Exposure to the Bacterial Volatile Compound Trimethylamine Modifies Antibiotic Resistance of Physically Separated Bacteria by Raising Culture Medium pH

(2014) S. Letoffe et al.   mBio

Metabolic Resource Allocation in Individual Microbes Determines Ecosystem Interactions and Spatial Dynamics

(2014) William R. Harcombe et al.   Cell Reports

A Modeling Framework for the Evolution and Spread of Antibiotic Resistance: Literature Review and Model Categorization

(2013) Ian H. Spicknall et al.   AMERICAN JOURNAL OF EPIDEMIOLOGY

The cost of antibiotic resistance depends on evolutionary history in Escherichia coli

(2013) Daniel C Angst et al.   BMC EVOLUTIONARY BIOLOGY

Evolution of Escherichia coli rifampicin resistance in an antibiotic-free environment during thermal stress

(2013) Alejandra Rodríguez-Verdugo et al.   BMC EVOLUTIONARY BIOLOGY

Interspecies signalling:Pseudomonas putidaefflux pump TtgGHI is activated by indole to increase antibiotic resistance

(2013) Carlos Molina-Santiago et al.   ENVIRONMENTAL MICROBIOLOGY

Bacterial cheating drives the population dynamics of cooperative antibiotic resistance plasmids

(2013) Eugene A Yurtsev et al.   Molecular Systems Biology

Evolutionary rescue from extinction is contingent on a lower rate of environmental change

(2013) Haley A. Lindsey et al.   NATURE

Resource Competition May Lead to Effective Treatment of Antibiotic Resistant Infections

(2013) Antonio L. C. Gomes et al.   PLoS One

Salmonella typhimurium intercepts Escherichia coli signaling to enhance antibiotic tolerance

(2013) N. M. Vega et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

A Moonlighting Enzyme Links Escherichia coli Cell Size with Central Metabolism

(2013) Norbert S. Hill et al.   PLoS Genetics

Context matters — the complex interplay between resistome genotypes and resistance phenotypes

(2012) Gautam Dantas et al.   CURRENT OPINION IN MICROBIOLOGY

Species Interactions Alter Evolutionary Responses to a Novel Environment

(2012) Diane Lawrence et al.   PLOS BIOLOGY

Biogenic ammonia modifies antibiotic resistance at a distance in physically separated bacteria

(2011) Steve P. Bernier et al.   MOLECULAR MICROBIOLOGY

The role of beta-lactamase-producing-bacteria in mixed infections

(2009) Itzhak Brook   BMC INFECTIOUS DISEASES

Functional relationship between bacterial cell density and the efficacy of antibiotics

(2009) K. I. Udekwu et al.   JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY

Protection of Salmonella by ampicillin-resistant Escherichia coli in the presence of otherwise lethal drug concentrations

(2009) M. H. Perlin et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES