Methodological Aspects of Multiplex Terminal Restriction Fragment Length Polymorphism-Technique to Describe the Genetic Diversity of Soil Bacteria, Archaea and Fungi

Advances in monitoring soil microbial community dynamic and function

(2020) K. K. Nkongolo et al.   JOURNAL OF APPLIED GENETICS

Soil Microbial Biomass and Community Composition Relates to Poplar Genotypes and Environmental Conditions

(2020) Leszek Karliński et al.   Forests

Land use change effects on diversity of soil bacterial, Acidobacterial and fungal communities in wetlands of the Sanjiang Plain, northeastern China

(2019) Xin Sui et al.   Scientific Reports

Isolation of high molecular weight and humic acid-free metagenomic DNA from lignocellulose-rich samples compatible for direct fosmid cloning

(2018) Abhijit Sar et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

High Microbial Diversity Promotes Soil Ecosystem Functioning

(2018) Pierre-Alain Maron et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Successive DNA extractions improve characterization of soil microbial communities

(2017) Mauricio R. Dimitrov et al.   PeerJ

Community fingerprinting in a sequencing world

(2014) Josie van Dorst et al.   FEMS MICROBIOLOGY ECOLOGY

Pros and Cons of Ion-Torrent Next Generation Sequencing versus Terminal Restriction Fragment Length Polymorphism T-RFLP for Studying the Rumen Bacterial Community

(2014) Gabriel de la Fuente et al.   PLoS One

Going back to the roots: the microbial ecology of the rhizosphere

(2013) Laurent Philippot et al.   NATURE REVIEWS MICROBIOLOGY

FunGene: the functional gene pipeline and repository

(2013) Jordan A. Fish et al.   Frontiers in Microbiology

Assessment of Variation in Bacterial Composition among Microhabitats in a Mangrove Environment Using DGGE Fingerprints and Barcoded Pyrosequencing

(2012) Daniel F. R. Cleary et al.   PLoS One

Multiplex T-RFLP Allows for Increased Target Number and Specificity: Detection of Salmonella enterica and Six Species of Listeria in a Single Test

(2012) Geoffrey N. Elliott et al.   PLoS One

Community Level Physiological Profiles (CLPP), Characterization and Microbial Activity of Soil Amended with Dairy Sewage Sludge

(2012) Magdalena Frąc et al.   SENSORS

Long-term datasets in biodiversity research and monitoring: assessing change in ecological communities through time

(2010) Anne E. Magurran et al.   TRENDS IN ECOLOGY & EVOLUTION

Analyzing salt-marsh fungal diversity: comparing ARISA fingerprinting with clone sequencing and pyrosequencing

(2009) Patrick M. Gillevet et al.   Fungal Ecology

TRiFLe, a Program for In Silico Terminal Restriction Fragment Length Polymorphism Analysis with User-Defined Sequence Sets

(2008) P. Junier et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

The unseen majority: soil microbes as drivers of plant diversity and productivity in terrestrial ecosystems

(2008) Marcel G. A. van der Heijden et al.   ECOLOGY LETTERS

The Fidelity Index provides a systematic quantitation of star activity of DNA restriction endonucleases

(2008) H. Wei et al.   NUCLEIC ACIDS RESEARCH