Nitrate deficiency decreased photosynthesis and oxidation-reduction processes, but increased cellular transport, lignin biosynthesis and flavonoid metabolism revealed by RNA-Seq in Oryza sativa leaves

Magnesium Deficiency Induced Global Transcriptome Change in Citrus sinensis Leaves Revealed by RNA-Seq

(2019) Yang et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Reactive Oxygen Species in Plant Signaling

(2018) Cezary Waszczak et al.   Annual Review of Plant Biology

Transcriptomic analyses of rice (Oryza sativa) genes and non-coding RNAs under nitrogen starvation using multiple omics technologies

(2018) Sang-Yoon Shin et al.   BMC GENOMICS

Proteome profile analysis of boron-induced alleviation of aluminum-toxicity in Citrus grandis roots

(2018) Lin-Tong Yang et al.   ECOTOXICOLOGY AND ENVIRONMENTAL SAFETY

Post-silking carbon partitioning under nitrogen deficiency revealed sink limitation of grain yield in maize

(2018) Peng Ning et al.   JOURNAL OF EXPERIMENTAL BOTANY

Differences in resistance to nitrogen and phosphorus deficiencies explain male-biased populations of poplar in nutrient-deficient habitats

(2018) Haifeng Song et al.   Journal of Proteomics

Transcriptome Analysis of Two Rice Varieties Contrasting for Nitrogen Use Efficiency under Chronic N Starvation Reveals Differences in Chloroplast and Starch Metabolism-Related Genes

(2018) Subodh Sinha et al.   Genes

Genome-Wide Identification and Analysis of Apple NITRATE TRANSPORTER 1/PEPTIDE TRANSPORTER Family (NPF) Genes Reveals MdNPF6.5 Confers High Capacity for Nitrogen Uptake under Low-Nitrogen Conditions

(2018) Qian Wang et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Comparative transcriptome combined with metabolomic and physiological analyses revealed ROS-mediated redox signaling affecting rice growth and cellular iron homeostasis under varying pH conditions

(2018) Haifei Chen et al.   PLANT AND SOIL

Genome-Wide Identification and Characterization of the Aquaporin Gene Family and Transcriptional Responses to Boron Deficiency in Brassica napus

(2017) Dan Yuan et al.   Frontiers in Plant Science

Identification of early ammonium nitrate-responsive genes in rice roots

(2017) Hsiu-Chun Yang et al.   Scientific Reports

Genome-wide transcriptome analysis of expression in rice seedling roots in response to supplemental nitrogen

(2016) Anil Kumar Nalini Chandran et al.   JOURNAL OF PLANT PHYSIOLOGY

Plant ABC Transporters Enable Many Unique Aspects of a Terrestrial Plant's Lifestyle

(2016) Jae-Ung Hwang et al.   Molecular Plant

Plant Nitrogen Acquisition Under Low Availability: Regulation of Uptake and Root Architecture

(2016) Takatoshi Kiba et al.   PLANT AND CELL PHYSIOLOGY

Transcriptomic Analysis of Responses to Imbalanced Carbon: Nitrogen Availabilities in Rice Seedlings

(2016) Aobo Huang et al.   PLoS One

Proteomic analyses provide new insights into the responses of Pinus massoniana seedlings to phosphorus deficiency

(2016) Fuhua Fan et al.   PROTEOMICS

Compositional changes of selected amino acids, organic acids, and soluble sugars in the xylem sap of N, P, or K-deficient tomato plants

(2015) Jwakyung Sung et al.   JOURNAL OF PLANT NUTRITION AND SOIL SCIENCE

Protein sHSP26 improves chloroplast performance under heat stress by interacting with specific chloroplast proteins in maize (Zea mays)

(2015) Xiuli Hu et al.   Journal of Proteomics

Phosphoenolpyruvate Carboxylase in Arabidopsis Leaves Plays a Crucial Role in Carbon and Nitrogen Metabolism

(2015) Jianghua Shi et al.   PLANT PHYSIOLOGY

Comparative transcriptome analysis of grapevine in response to copper stress

(2015) Xiangpeng Leng et al.   Scientific Reports

Phosphate Nutrition: Improving Low-Phosphate Tolerance in Crops

(2014) Damar Lizbeth López-Arredondo et al.   Annual Review of Plant Biology

Strigolactones are involved in phosphate- and nitrate-deficiency-induced root development and auxin transport in rice

(2014) Huwei Sun et al.   JOURNAL OF EXPERIMENTAL BOTANY

The Arabidopsis nitrate transporter NRT2.5 plays a role in nitrate acquisition and remobilization in nitrogen-starved plants

(2014) Lina Lezhneva et al.   PLANT JOURNAL

Sex-related differences in growth and carbon allocation to defence in Populus tremula as explained by current plant defence theories

(2014) T. R. Randriamanana et al.   TREE PHYSIOLOGY

Nitrogen-Dependent Regulation of De Novo Cytokinin Biosynthesis in Rice: The Role of Glutamine Metabolism as an Additional Signal

(2013) Tomoe Kamada-Nobusada et al.   PLANT AND CELL PHYSIOLOGY

Systems-Level Analysis of Nitrogen Starvation-Induced Modifications of Carbon Metabolism in a Chlamydomonas reinhardtii Starchless Mutant

(2013) I. K. Blaby et al.   PLANT CELL

Overexpression of Arabidopsis Dof1, GS1 and GS2 Enhanced Nitrogen Assimilation in Transgenic Tobacco Grown Under Low-Nitrogen Conditions

(2013) Yilin Wang et al.   PLANT MOLECULAR BIOLOGY REPORTER

Two Phloem Nitrate Transporters, NRT1.11 and NRT1.12, Are Important for Redistributing Xylem-Borne Nitrate to Enhance Plant Growth

(2013) P.-K. Hsu et al.   PLANT PHYSIOLOGY

A unified nomenclature of NITRATE TRANSPORTER 1/PEPTIDE TRANSPORTER family members in plants

(2013) Sophie Léran et al.   TRENDS IN PLANT SCIENCE

Transcriptome response to nitrogen starvation in rice

(2012) Hongmei Cai et al.   JOURNAL OF BIOSCIENCES

Fast gapped-read alignment with Bowtie 2

(2012) Ben Langmead et al.   NATURE METHODS

Nitrate transport capacity of theArabidopsis thalianaNRT2 family members and their interactions with AtNAR2.1

(2012) Zorica Kotur et al.   NEW PHYTOLOGIST

Maize Source Leaf Adaptation to Nitrogen Deficiency Affects Not Only Nitrogen and Carbon Metabolism But Also Control of Phosphate Homeostasis

(2012) U. Schluter et al.   PLANT PHYSIOLOGY

Transcriptome analysis reveals coordinated spatiotemporal regulation of hemoglobin and nitrate reductase in response to nitrate in maize roots

(2011) S. Trevisan et al.   NEW PHYTOLOGIST

Effect of nitrogen deficiency on antioxidant status and Cd toxicity in rice seedlings

(2011) Ya-Lin Lin et al.   PLANT GROWTH REGULATION

Over-expression of PHO1 in Arabidopsis leaves reveals its role in mediating phosphate efflux

(2011) Aleksandra Stefanovic et al.   PLANT JOURNAL

A Deletion in NRT2.1 Attenuates Pseudomonas syringae-Induced Hormonal Perturbation, Resulting in Primed Plant Defenses

(2011) G. Camanes et al.   PLANT PHYSIOLOGY

The signal effect of nitrate supply enhances active forms of cytokinins and indole acetic content and reduces abscisic acid in wheat plants grown with ammonium

(2010) Maria Garnica et al.   JOURNAL OF PLANT PHYSIOLOGY

Metabolomics for plant stress response

(2010) Vladimir Shulaev et al.   PHYSIOLOGIA PLANTARUM

Reactive oxygen species and antioxidant machinery in abiotic stress tolerance in crop plants

(2010) Sarvajeet Singh Gill et al.   PLANT PHYSIOLOGY AND BIOCHEMISTRY

Gene ontology analysis for RNA-seq: accounting for selection bias

(2010) Matthew D Young et al.   GENOME BIOLOGY

DEGseq: an R package for identifying differentially expressed genes from RNA-seq data

(2009) Likun Wang et al.   BIOINFORMATICS

CO2 assimilation, ribulose-1,5-bisphosphate carboxylase/oxygenase, carbohydrates and photosynthetic electron transport probed by the JIP-test, of tea leaves in response to phosphorus supply

(2009) Zheng-He Lin et al.   BMC PLANT BIOLOGY

Induction of leaf senescence by low nitrogen nutrition in sunflower (Helianthus annuus) plants

(2009) Eloísa Agüera et al.   PHYSIOLOGIA PLANTARUM

Degradation of cytokinins by maize cytokinin dehydrogenase is mediated by free radicals generated by enzymatic oxidation of natural benzoxazinones

(2009) Jitka Frébortová et al.   PLANT JOURNAL

Identification of Nutrient-Responsive Arabidopsis and Rapeseed MicroRNAs by Comprehensive Real-Time Polymerase Chain Reaction Profiling and Small RNA Sequencing

(2009) B. D. Pant et al.   PLANT PHYSIOLOGY

Effects of nitrogen deficiency on leaf photosynthesis, carbohydrate status and biomass production in two olive cultivars ‘Meski’ and ‘Koroneiki’

(2009) O. Boussadia et al.   SCIENTIA HORTICULTURAE

Adaptation of Arabidopsis to nitrogen limitation involves induction of anthocyanin synthesis which is controlled by the NLA gene

(2008) M. Peng et al.   JOURNAL OF EXPERIMENTAL BOTANY

Mapping and quantifying mammalian transcriptomes by RNA-Seq

(2008) Ali Mortazavi et al.   NATURE METHODS

Nitrogen Recycling and Remobilization Are Differentially Controlled by Leaf Senescence and Development Stage in Arabidopsis under Low Nitrogen Nutrition

(2008) C. Diaz et al.   PLANT PHYSIOLOGY