标题
Fusion transcript detection using spatial transcriptomics
作者
关键词
-
出版物
BMC Medical Genomics
Volume 13, Issue 1, Pages -
出版商
Springer Science and Business Media LLC
发表日期
2020-08-05
DOI
10.1186/s12920-020-00738-5
参考文献
相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。- Chimeric RNAs and their implications in cancer
- (2018) Zi Li et al. CURRENT OPINION IN GENETICS & DEVELOPMENT
- Spatial maps of prostate cancer transcriptomes reveal an unexplored landscape of heterogeneity
- (2018) Emelie Berglund et al. Nature Communications
- New approach for understanding genome variations in KEGG
- (2018) Minoru Kanehisa et al. NUCLEIC ACIDS RESEARCH
- The Landscape and Implications of Chimeric RNAs in Cervical Cancer
- (2018) Peng Wu et al. EBioMedicine
- Comparison of Digital Rectal Examination and Serum Prostate Specific Antigen in the Early Detection of Prostate Cancer: Results of a Multicenter Clinical Trial of 6,630 Men
- (2017) William J. Catalona et al. JOURNAL OF UROLOGY
- Ensembl 2018
- (2017) Daniel R Zerbino et al. NUCLEIC ACIDS RESEARCH
- Translation of poly(A) tails leads to precise mRNA cleavage
- (2017) Nicholas R. Guydosh et al. RNA
- Chimeric RNAs in cancer and normal physiology
- (2017) Katarzyna Chwalenia et al. Wiley Interdisciplinary Reviews-RNA
- Absence of Correlation between Chimeric RNA and Aging
- (2017) Reyna Huang et al. Genes
- AR Signaling and the PI3K Pathway in Prostate Cancer
- (2017) Megan Crumbaker et al. Cancers
- Urine TMPRSS2: ERG Fusion Transcript as a Biomarker for Prostate Cancer: Literature Review
- (2016) Francesca Sanguedolce et al. Clinical Genitourinary Cancer
- A Contemporary Prostate Cancer Grading System: A Validated Alternative to the Gleason Score
- (2016) Jonathan I. Epstein et al. EUROPEAN UROLOGY
- Regulation of Poly(A) Tail and Translation during the Somatic Cell Cycle
- (2016) Jong-Eun Park et al. MOLECULAR CELL
- PathwAX: a web server for network crosstalk based pathway annotation
- (2016) Christoph Ogris et al. NUCLEIC ACIDS RESEARCH
- Visualization and analysis of gene expression in tissue sections by spatial transcriptomics
- (2016) P. L. Stahl et al. SCIENCE
- Comparative assessment of methods for the fusion transcripts detection from RNA-Seq data
- (2016) Shailesh Kumar et al. Scientific Reports
- Signaling Networks that Regulate Cell Migration
- (2015) Peter Devreotes et al. Cold Spring Harbor Perspectives in Biology
- Full-length single-cell RNA-seq applied to a viral human cancer: applications to HPV expression and splicing analysis in HeLa S3 cells
- (2015) Liang Wu et al. GigaScience
- PI3K-AKT-mTOR signaling in prostate cancer progression and androgen deprivation therapy resistance
- (2014) AndrewC Hsieh et al. ASIAN JOURNAL OF ANDROLOGY
- TAIL-seq: Genome-wide Determination of Poly(A) Tail Length and 3′ End Modifications
- (2014) Hyeshik Chang et al. MOLECULAR CELL
- Transcription-Mediated Chimeric RNAs in Prostate Cancer: Time to Revisit Old Hypothesis?
- (2014) Guoping Ren et al. OMICS-A JOURNAL OF INTEGRATIVE BIOLOGY
- State of art fusion-finder algorithms are suitable to detect transcription-induced chimeras in normal tissues?
- (2013) Matteo Carrara et al. BMC BIOINFORMATICS
- I-Motif-Programmed Functionalization of DNA Nanocircles
- (2013) Tao Li et al. JOURNAL OF THE AMERICAN CHEMICAL SOCIETY
- The Genomic and Transcriptomic Landscape of a HeLa Cell Line
- (2013) Jonathan J. M. Landry et al. G3-Genes Genomes Genetics
- TopHat2: accurate alignment of transcriptomes in the presence of insertions, deletions and gene fusions
- (2013) Daehwan Kim et al. GENOME BIOLOGY
- STAR: ultrafast universal RNA-seq aligner
- (2012) Alexander Dobin et al. BIOINFORMATICS
- Chimeric RNAs as potential biomarkers for tumor diagnosis
- (2012) Jianhua Zhou et al. BMB Reports
- Chimeric Transcript Generated by cis-Splicing of Adjacent Genes Regulates Prostate Cancer Cell Proliferation
- (2012) Yanmei Zhang et al. Cancer Discovery
- A statistical framework for SNP calling, mutation discovery, association mapping and population genetical parameter estimation from sequencing data
- (2011) H. Li BIOINFORMATICS
- Gene fusions and RNA trans-splicing in normal and neoplastic human cells
- (2011) Hui Li et al. CELL CYCLE
- SLC45A3-ELK4 Is a Novel and Frequent Erythroblast Transformation-Specific Fusion Transcript in Prostate Cancer
- (2009) D. S. Rickman et al. CANCER RESEARCH
- BreakDancer: an algorithm for high-resolution mapping of genomic structural variation
- (2009) Ken Chen et al. NATURE METHODS
- Ultrafast and memory-efficient alignment of short DNA sequences to the human genome
- (2009) Ben Langmead et al. GENOME BIOLOGY
- Identification of ETS-like transcription factor 4 as a novel androgen receptor target in prostate cancer cells
- (2008) H Makkonen et al. ONCOGENE
Create your own webinar
Interested in hosting your own webinar? Check the schedule and propose your idea to the Peeref Content Team.
Create NowBecome a Peeref-certified reviewer
The Peeref Institute provides free reviewer training that teaches the core competencies of the academic peer review process.
Get Started