The alcohol dehydrogenase gene family in sugarcane and its involvement in cold stress regulation

Sugarcane calcineurin B-like (CBL) genes play important but versatile roles in regulation of responses to biotic and abiotic stresses

(2020) Weihua Su et al.   Scientific Reports

TBtools: An Integrative Toolkit Developed for Interactive Analyses of Big Biological Data

(2020) Chengjie Chen et al.   Molecular Plant

Genome-wide identification, phylogeny, and expression analysis of Sec14-like PITP gene family in sugarcane

(2019) Mao Hua-ying et al.   PLANT CELL REPORTS

Evolview v3: a webserver for visualization, annotation, and management of phylogenetic trees

(2019) Balakrishnan Subramanian et al.   NUCLEIC ACIDS RESEARCH

Genome survey of resistance gene analogs in sugarcane: genomic features and differential expression of the innate immune system from a smut-resistant genotype

(2019) Hugo V. S. Rody et al.   BMC GENOMICS

The transcription factor CsbHLH18 of sweet orange functions in modulation of cold tolerance and homeostasis of reactive oxygen species by regulating the antioxidant gene

(2018) Jingjing Geng et al.   JOURNAL OF EXPERIMENTAL BOTANY

A mosaic monoploid reference sequence for the highly complex genome of sugarcane

(2018) Olivier Garsmeur et al.   Nature Communications

A Novel L-ascorbate Peroxidase 6 Gene, ScAPX6, Plays an Important Role in the Regulation of Response to Biotic and Abiotic Stresses in Sugarcane

(2018) Feng Liu et al.   Frontiers in Plant Science

A Small GTP-Binding Gene ScRan from Sugarcane is Involved in Responses to Various Hormone Stresses and Sporisirium scitamineum Challenge

(2018) Ning Huang et al.   Sugar Tech

Transcriptional analysis identifies major pathways as response components to Sporisorium scitamineum stress in sugarcane

(2018) Ning Huang et al.   GENE

Allele-defined genome of the autopolyploid sugarcane Saccharum spontaneum L.

(2018) Jisen Zhang et al.   NATURE GENETICS

The Pfam protein families database in 2019

(2018) Sara El-Gebali et al.   NUCLEIC ACIDS RESEARCH

Evolution of the 3R-MYB Gene Family in Plants

(2017) Guanqiao Feng et al.   Genome Biology and Evolution

PLAZA 4.0: an integrative resource for functional, evolutionary and comparative plant genomics

(2017) Michiel Van Bel et al.   NUCLEIC ACIDS RESEARCH

Ensembl Genomes 2018: an integrated omics infrastructure for non-vertebrate species

(2017) Paul Julian Kersey et al.   NUCLEIC ACIDS RESEARCH

Alcohol dehydrogenase 1 ( ADH1 ) confers both abiotic and biotic stress resistance in Arabidopsis

(2017) Haitao Shi et al.   PLANT SCIENCE

An Alcohol Dehydrogenase Gene from Synechocystis sp. Confers Salt Tolerance in Transgenic Tobacco

(2017) So Young Yi et al.   Frontiers in Plant Science

CDD/SPARCLE: functional classification of proteins via subfamily domain architectures

(2016) Aron Marchler-Bauer et al.   NUCLEIC ACIDS RESEARCH

Reactive oxygen species, abiotic stress and stress combination

(2016) Feroza K. Choudhury et al.   PLANT JOURNAL

A Complex Interplay of Tandem- and Whole-Genome Duplication Drives Expansion of the L-Type Lectin Receptor Kinase Gene Family in the Brassicaceae

(2015) Johannes A. Hofberger et al.   Genome Biology and Evolution

Response of Foliar Application of Nitrogen Compounds on Sugarcane Grown Under Waterlogging Stress

(2015) Radha Jain et al.   Sugar Tech

RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies

(2014) Alexandros Stamatakis   BIOINFORMATICS

Genome sequencing of Sporisorium scitamineum provides insights into the pathogenic mechanisms of sugarcane smut

(2014) Youxiong Que et al.   BMC GENOMICS

Genome-Wide Analyses of a Plant-Specific LIM-Domain Gene Family Implicate Its Evolutionary Role in Plant Diversification

(2014) Man Zhao et al.   Genome Biology and Evolution

Integrated Syntenic and Phylogenomic Analyses Reveal an Ancient Genome Duplication in Monocots

(2014) Yuannian Jiao et al.   PLANT CELL

Hydrogen peroxide controls transcriptional responses of ERF73/HRE1 and ADH1 via modulation of ethylene signaling during hypoxic stress

(2014) Chin-Ying Yang   PLANTA

Molecular cloning and characterization of two pathogenesis-related β-1,3-glucanase genes ScGluA1 and ScGluD1 from sugarcane infected by Sporisorium scitamineum

(2013) Ya-chun Su et al.   PLANT CELL REPORTS

A Basic Helix-Loop-Helix Transcription Factor, PtrbHLH, of Poncirus trifoliata Confers Cold Tolerance and Modulates Peroxidase-Mediated Scavenging of Hydrogen Peroxide

(2013) X.-S. Huang et al.   PLANT PHYSIOLOGY

MCScanX: a toolkit for detection and evolutionary analysis of gene synteny and collinearity

(2012) Y. Wang et al.   NUCLEIC ACIDS RESEARCH

A novel dirigent protein gene with highly stem-specific expression from sugarcane, response to drought, salt and oxidative stresses

(2012) Guo Jin-long et al.   PLANT CELL REPORTS

Dehydrin, alcohol dehydrogenase, and central metabolite levels are associated with cold tolerance in diploid strawberry (Fragaria spp.)

(2012) Jahn Davik et al.   PLANTA

An arginine decarboxylase gene PtADC from Poncirus trifoliata confers abiotic stress tolerance and promotes primary root growth in Arabidopsis

(2011) Jing Wang et al.   JOURNAL OF EXPERIMENTAL BOTANY

Ancestral polyploidy in seed plants and angiosperms

(2011) Yuannian Jiao et al.   NATURE

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(2011) David M. Goodstein et al.   NUCLEIC ACIDS RESEARCH

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(2011) R. D. Finn et al.   NUCLEIC ACIDS RESEARCH

Analysis of the grasspea proteome and identification of stress-responsive proteins upon exposure to high salinity, low temperature, and abscisic acid treatment

(2011) Arnab Chattopadhyay et al.   PHYTOCHEMISTRY

Salt and drought tolerance of sugarcane under iso-osmotic salt and water stress: growth, osmolytes accumulation, and antioxidant defense

(2011) Vikas Yadav Patade et al.   Journal of Plant Interactions

Abscisic Acid: Emergence of a Core Signaling Network

(2010) Sean R. Cutler et al.   Annual Review of Plant Biology

The plant ADH gene family

(2010) Judith Strommer   PLANT JOURNAL

Proteome analysis of soybean leaves, hypocotyls and roots under salt stress

(2010) Hamid Sobhanian et al.   Proteome Science

The roles of aldehyde dehydrogenases (ALDHs) in the PDH bypass of Arabidopsis

(2009) Yanling Wei et al.   BMC BIOCHEMISTRY

Gene and genome duplications: the impact of dosage-sensitivity on the fate of nuclear genes

(2009) Patrick P. Edger et al.   CHROMOSOME RESEARCH

Reactive oxygen species homeostasis and signalling during drought and salinity stresses

(2009) GAD MILLER et al.   PLANT CELL AND ENVIRONMENT

Sumoylation of ABI5 by the Arabidopsis SUMO E3 ligase SIZ1 negatively regulates abscisic acid signaling

(2009) K. Miura et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Flooding Stress: Acclimations and Genetic Diversity

(2008) J. Bailey-Serres et al.   Annual Review of Plant Biology

Regulation of Respiration and Fermentation to Control the Plant Internal Oxygen Concentration

(2008) A. Zabalza et al.   PLANT PHYSIOLOGY

Functional Identification of Arabidopsis Stress Regulatory Genes Using the Controlled cDNA Overexpression System

(2008) C. Papdi et al.   PLANT PHYSIOLOGY

Genomic Plasticity and the Diversity of Polyploid Plants

(2008) A. R. Leitch et al.   SCIENCE