Repertoire and Diversity of Toxin – Antitoxin Systems of Crohn’s Disease-Associated Adherent-Invasive Escherichia coli. New Insight of T his Emergent E. coli Pathotype

Type II toxin-antitoxin systems: evolution and revolutions

(2020) N. Fraikin et al.   JOURNAL OF BACTERIOLOGY

Escherichia coli Pathobionts Associated with Inflammatory Bowel Disease

(2019) Hengameh Chloé Mirsepasi-Lauridsen et al.   CLINICAL MICROBIOLOGY REVIEWS

Host-Specific Adaptive Diversification of Crohn’s Disease-Associated Adherent-Invasive Escherichia coli

(2019) Wael Elhenawy et al.   Cell Host & Microbe

TASmania: A bacterial Toxin-Antitoxin Systems database

(2019) Hatice Akarsu et al.   PLoS Computational Biology

The Crohn’s disease-associated Escherichia coli strain LF82 relies on SOS and stringent responses to survive, multiply and tolerate antibiotics within macrophages

(2019) Gaëlle Demarre et al.   PLoS Pathogens

Toxins, Targets, and Triggers: An Overview of Toxin-Antitoxin Biology

(2018) Alexander Harms et al.   MOLECULAR CELL

Reassessing the Role of Type II Toxin-Antitoxin Systems in Formation of Escherichia coli Type II Persister Cells

(2018) Frédéric Goormaghtigh et al.   mBio

Post-segregational Killing and Phage Inhibition Are Not Mediated by Cell Death Through Toxin/Antitoxin Systems

(2018) Sooyeon Song et al.   Frontiers in Microbiology

Toxin–antitoxin systems and regulatory mechanisms in Mycobacterium tuberculosis

(2018) Richard A Slayden et al.   Pathogens and Disease

Crohn's disease

(2017) Joana Torres et al.   LANCET

TADB 2.0: an updated database of bacterial type II toxin–antitoxin loci

(2017) Yingzhou Xie et al.   NUCLEIC ACIDS RESEARCH

Genetic Diversity and Virulence Determinants of Escherichia coli Strains Isolated from Patients with Crohn's Disease in Spain and Chile

(2017) Sandra Céspedes et al.   Frontiers in Microbiology

Comparative genomics of Crohn's disease-associated adherent-invasive Escherichia coli

(2016) Claire L O'Brien et al.   GUT

Molecular Determinants in Phagocyte-Bacteria Interactions

(2016) Stefan H.E. Kaufmann et al.   IMMUNITY

Emerging Roles of Toxin-Antitoxin Modules in Bacterial Pathogenesis

(2016) Barbara Kędzierska et al.   MOLECULES

An oxygen-sensitive toxin–antitoxin system

(2016) Oriol Marimon et al.   Nature Communications

Diverse distribution of Toxin-Antitoxin II systems in Salmonella enterica serovars

(2016) Andrea Di Cesare et al.   Scientific Reports

The MqsR/MqsA toxin/antitoxin system protectsEscherichia coliduring bile acid stress

(2015) Brian W. Kwan et al.   ENVIRONMENTAL MICROBIOLOGY

Type II toxin–antitoxin systems are unevenly distributed among Escherichia coli phylogroups

(2015) Krzysztof Fiedoruk et al.   MICROBIOLOGY-SGM

HipBA–promoter structures reveal the basis of heritable multidrug tolerance

(2015) Maria A. Schumacher et al.   NATURE

ClustVis: a web tool for visualizing clustering of multivariate data using Principal Component Analysis and heatmap

(2015) Tauno Metsalu et al.   NUCLEIC ACIDS RESEARCH

Functional RelBE-Family Toxin-Antitoxin Pairs Affect Biofilm Maturation and Intestine Colonization in Vibrio cholerae

(2015) Yuning Wang et al.   PLoS One

Regulatory crosstalk between type I and type II toxin-antitoxin systems in the human pathogenEnterococcus faecalis

(2015) Françoise Wessner et al.   RNA Biology

Dual RNA-seq of Nontypeable Haemophilus influenzae and Host Cell Transcriptomes Reveals Novel Insights into Host-Pathogen Cross Talk

(2015) B. Baddal et al.   mBio

Distinct type I and type II toxin-antitoxin modules control Salmonella lifestyle inside eukaryotic cells

(2015) Damián Lobato-Márquez et al.   Scientific Reports

Orphan Toxin OrtT (YdcX) of Escherichia coli Reduces Growth during the Stringent Response

(2015) Sabina Islam et al.   Toxins

Internalization of Salmonella by Macrophages Induces Formation of Nonreplicating Persisters

(2014) S. Helaine et al.   SCIENCE

The large-scale blast score ratio (LS-BSR) pipeline: a method to rapidly compare genetic content between bacterial genomes

(2014) Jason W. Sahl et al.   PeerJ

Molecular Mechanism of Bacterial Persistence by HipA

(2013) Elsa Germain et al.   MOLECULAR CELL

Chaperone-Usher Fimbriae of Escherichia coli

(2013) Daniël J. Wurpel et al.   PLoS One

HipA-mediated antibiotic persistence via phosphorylation of the glutamyl-tRNA-synthetase

(2013) Ilana Kaspy et al.   Nature Communications

Primer-BLAST: A tool to design target-specific primers for polymerase chain reaction

(2012) Jian Ye et al.   BMC BIOINFORMATICS

Toxin-antitoxin loci vapBC-1 and vapXD contribute to survival and virulence in nontypeable Haemophilus influenzae

(2012) Dabin Ren et al.   BMC MICROBIOLOGY

Bile salts induce long polar fimbriae expression favouring Crohn's disease-associated adherent-invasiveEscherichia coliinteraction with Peyer's patches

(2012) Benoit Chassaing et al.   ENVIRONMENTAL MICROBIOLOGY

Type II toxin/antitoxin MqsR/MqsA controls type V toxin/antitoxin GhoT/GhoS

(2012) Xiaoxue Wang et al.   ENVIRONMENTAL MICROBIOLOGY

A new type V toxin-antitoxin system where mRNA for toxin GhoT is cleaved by antitoxin GhoS

(2012) Xiaoxue Wang et al.   Nature Chemical Biology

Toxin-Antitoxin Systems Are Important for Niche-Specific Colonization and Stress Resistance of Uropathogenic Escherichia coli

(2012) J. Paul Norton et al.   PLoS Pathogens

Toxin-Antitoxin Systems Influence Biofilm and Persister Cell Formation and the General Stress Response

(2011) Xiaoxue Wang et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Easyfig: a genome comparison visualizer

(2011) M. J. Sullivan et al.   BIOINFORMATICS

Toxins-antitoxins: diversity, evolution and function

(2011) Finbarr Hayes et al.   CRITICAL REVIEWS IN BIOCHEMISTRY AND MOLECULAR BIOLOGY

Complete Genome Sequence of the Crohn's Disease-Associated Adherent-Invasive Escherichia coliStrain HM605

(2011) D. J. Clarke et al.   JOURNAL OF BACTERIOLOGY

Fast, scalable generation of high-quality protein multiple sequence alignments using Clustal Omega

(2011) F. Sievers et al.   Molecular Systems Biology

CD-HIT Suite: a web server for clustering and comparing biological sequences

(2010) Ying Huang et al.   BIOINFORMATICS

Genome sequence of adherent-invasive Escherichia coli and comparative genomic analysis with other E. coli pathotypes

(2010) John HE Nash et al.   BMC GENOMICS

Complete Genome Sequence of Crohn's Disease-Associated Adherent-Invasive E. coli Strain LF82

(2010) Sylvie Miquel et al.   PLoS One

The Decay of the Chromosomally Encoded ccdO157 Toxin-Antitoxin System in the Escherichia coli Species

(2009) N. Mine et al.   GENETICS

Genetic Structure and Distribution of the Colibactin Genomic Island among Members of the Family Enterobacteriaceae

(2009) J. Putze et al.   INFECTION AND IMMUNITY

Similarity and Divergence among Adherent-Invasive Escherichia coli and Extraintestinal Pathogenic E. coli Strains

(2009) M. Martinez-Medina et al.   JOURNAL OF CLINICAL MICROBIOLOGY

Molecular Mechanisms of HipA-Mediated Multidrug Tolerance and Its Neutralization by HipB

(2009) M. A. Schumacher et al.   SCIENCE

Three Mycobacterium tuberculosis Rel Toxin-Antitoxin Modules Inhibit Mycobacterial Growth and Are Expressed in Infected Human Macrophages

(2008) S. B. Korch et al.   JOURNAL OF BACTERIOLOGY

Chromosomal Toxin-Antitoxin Systems May Act as Antiaddiction Modules

(2008) M. Saavedra De Bast et al.   JOURNAL OF BACTERIOLOGY

Repression of small toxic protein synthesis by the Sib and OhsC small RNAs

(2008) Elizabeth M. Fozo et al.   MOLECULAR MICROBIOLOGY