Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress

MYC2 Regulates the Termination of Jasmonate Signaling via an Autoregulatory Negative Feedback Loop

(2019) Yuanyuan Liu et al.   PLANT CELL

The Mediator kinase module serves as a positive regulator of salicylic acid accumulation and systemic acquired resistance

(2019) Jianhua Huang et al.   PLANT JOURNAL

Interaction map of Arabidopsis Mediator complex expounding its topology

(2019) Sourobh Maji et al.   NUCLEIC ACIDS RESEARCH

Mutation of Mediator subunit CDK 8 counteracts the stunted growth and salicylic acid hyperaccumulation phenotypes of an Arabidopsis MED 5 mutant

(2019) Xiangying Mao et al.   NEW PHYTOLOGIST

NPR1 promotes its own and target gene expression in plant defense by recruiting CDK8

(2019) Jian Chen et al.   PLANT PHYSIOLOGY

Transcriptional Profiling Reveals a Time-of-day Specific Role of REVEILLE 4/8 in Regulating the First Wave of Heat Shock-induced Gene Expression in Arabidopsis

(2019) Bingjie LI et al.   PLANT CELL

Transcriptional Repression of the APC/C Activator Genes CCS52A1/A2 by the Mediator Complex Subunit MED16 Controls Endoreduplication and Cell Growth in Arabidopsis

(2019) Zupei Liu et al.   PLANT CELL

Snf1-RELATED KINASE1-Controlled C/S1-bZIP Signaling Activates Alternative Mitochondrial Metabolic Pathways to Ensure Plant Survival in Extended Darkness

(2018) Lorenzo Pedrotti et al.   PLANT CELL

The C/S 1 bZIP Network: A Regulatory Hub Orchestrating Plant Energy Homeostasis

(2018) Wolfgang Dröge-Laser et al.   TRENDS IN PLANT SCIENCE

In situ immune response and mechanisms of cell damage in central nervous system of fatal cases microcephaly by Zika virus

(2018) Raimunda S. S. Azevedo et al.   Scientific Reports

Transcriptome Analysis of FourArabidopsis thalianaMediator Tail Mutants Reveals Overlapping and Unique Functions in Gene Regulation

(2018) Whitney L. Dolan et al.   G3-Genes Genomes Genetics

ELF18-INDUCED LONG NONCODING RNA 1 evicts fibrillarin from mediator subunit to enhance PATHOGENESIS-RELATED GENE 1 (PR1 ) expression

(2018) Jun Sung Seo et al.   NEW PHYTOLOGIST

MEDIATOR18 influences Arabidopsis root architecture, represses auxin signaling and is a critical factor for cell viability in root meristems

(2018) Javier Raya-González et al.   PLANT JOURNAL

The role of retrograde signals during plant stress responses

(2017) Tim Crawford et al.   JOURNAL OF EXPERIMENTAL BOTANY

TF2Network: predicting transcription factor regulators and gene regulatory networks in Arabidopsis using publicly available binding site information

(2017) Shubhada R Kulkarni et al.   NUCLEIC ACIDS RESEARCH

Multifaceted role of cycling DOF factor 3 (CDF3) in the regulation of flowering time and abiotic stress responses in Arabidopsis

(2017) Alba-Rocio Corrales et al.   PLANT CELL AND ENVIRONMENT

Araport11: a complete reannotation of theArabidopsis thalianareference genome

(2017) Chia-Yi Cheng et al.   PLANT JOURNAL

Functional metabolomics as a tool to analyze Mediator function and structure in plants

(2017) Celine Davoine et al.   PLoS One

Mediator subunit MED25 links the jasmonate receptor to transcriptionally active chromatin

(2017) Chunpeng An et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Novel Stress in Plants by Altering the Photoperiod

(2017) Silvia Nitschke et al.   TRENDS IN PLANT SCIENCE

Transcriptional Regulatory Network of Plant Heat Stress Response

(2017) Naohiko Ohama et al.   TRENDS IN PLANT SCIENCE

The Structural Basis of Transcription: 10 Years After the Nobel Prize in Chemistry

(2016) Merle Hantsche et al.   ANGEWANDTE CHEMIE-INTERNATIONAL EDITION

Learning the Languages of the Chloroplast: Retrograde Signaling and Beyond

(2016) Kai Xun Chan et al.   Annual Review of Plant Biology

Gene regulatory network inference using PLS-based methods

(2016) Shun Guo et al.   BMC BIOINFORMATICS

Plant hormone-mediated regulation of stress responses

(2016) Vivek Verma et al.   BMC PLANT BIOLOGY

Abiotic Stress Signaling and Responses in Plants

(2016) Jian-Kang Zhu   CELL

A Dual-Function Transcription Factor, AtYY1, Is a Novel Negative Regulator of the Arabidopsis ABA Response Network

(2016) Tian Li et al.   Molecular Plant

Near-optimal probabilistic RNA-seq quantification

(2016) Nicolas L Bray et al.   NATURE BIOTECHNOLOGY

Thecbfstriple mutants reveal the essential functions ofCBFsin cold acclimation and allow the definition of CBF regulons inArabidopsis

(2016) Yuxin Jia et al.   NEW PHYTOLOGIST

Managing the protein folding demands in the endoplasmic reticulum of plants

(2016) Jian-Xiang Liu et al.   NEW PHYTOLOGIST

PlantTFDB 4.0: toward a central hub for transcription factors and regulatory interactions in plants

(2016) Jinpu Jin et al.   NUCLEIC ACIDS RESEARCH

Erratum: How many biological replicates are needed in an RNA-seq experiment and which differential expression tool should you use?

(2016) Nicholas J. Schurch et al.   RNA

The arabidopsis information resource: Making and mining the “gold standard” annotated reference plant genome

(2015) Tanya Z. Berardini et al.   GENESIS

Plant Mediator complex and its critical functions in transcription regulation

(2015) Yan Yang et al.   Journal of Integrative Plant Biology

Regulation of Photosynthesis during Abiotic Stress-Induced Photoinhibition

(2015) Mayank Anand Gururani et al.   Molecular Plant

Transcriptional networks in plant immunity

(2015) Kenichi Tsuda et al.   NEW PHYTOLOGIST

Diverse roles of jasmonates and ethylene in abiotic stress tolerance

(2015) Kemal Kazan   TRENDS IN PLANT SCIENCE

Circadian regulation of abiotic stress tolerance in plants

(2015) Jack Grundy et al.   Frontiers in Plant Science

Importance of Mediator complex in the regulation and integration of diverse signaling pathways in plants

(2015) Subhasis Samanta et al.   Frontiers in Plant Science

Subunit Architecture and Functional Modular Rearrangements of the Transcriptional Mediator Complex

(2014) Kuang-Lei Tsai et al.   CELL

Mediator MED18 subunit plays a negative role in transcription via the CDK/cyclin module

(2014) Masayuki Kumafuji et al.   GENES TO CELLS

Gene expression profiles of arabidopsis under the stress of methyl viologen: a microarray analysis

(2014) Hong-Juan Han et al.   MOLECULAR BIOLOGY REPORTS

CYCLIN-DEPENDENT KINASE8 Differentially Regulates Plant Immunity to Fungal Pathogens through Kinase-Dependent and -Independent Functions in Arabidopsis

(2014) Y. Zhu et al.   PLANT CELL

The Arabidopsis Mediator Complex Subunits MED16, MED14, and MED2 Regulate Mediator and RNA Polymerase II Recruitment to CBF-Responsive Cold-Regulated Genes

(2014) P. A. Hemsley et al.   PLANT CELL

The Arabidopsis Mediator subunit MED16 regulates iron homeostasis by associating with EIN3/EIL1 through subunit MED25

(2014) Yan Yang et al.   PLANT JOURNAL

NIMEFI: Gene Regulatory Network Inference using Multiple Ensemble Feature Importance Algorithms

(2014) Joeri Ruyssinck et al.   PLoS One

MED18 interaction with distinct transcription factors regulates multiple plant functions

(2014) Zhibing Lai et al.   Nature Communications

Mediator Recruitment to Heat Shock Genes Requires Dual Hsf1 Activation Domains and Mediator Tail Subunits Med15 and Med16

(2013) Sunyoung Kim et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Submergence Confers Immunity Mediated by the WRKY22 Transcription Factor in Arabidopsis

(2013) F.-C. Hsu et al.   PLANT CELL

Roles of CAMTA transcription factors and salicylic acid in configuring the low-temperature transcriptome and freezing tolerance of Arabidopsis

(2013) YongSig Kim et al.   PLANT JOURNAL

Protocol: optimising hydroponic growth systems for nutritional and physiological analysis of Arabidopsis thaliana and other plants

(2013) Simon J Conn et al.   Plant Methods

Mediator Subunit18 Controls Flowering Time and Floral Organ Identity in Arabidopsis

(2013) Zhengui Zheng et al.   PLoS One

NARROMI: a noise and redundancy reduction technique improves accuracy of gene regulatory network inference

(2012) Xiujun Zhang et al.   BIOINFORMATICS

TIGRESS: Trustful Inference of Gene REgulation using Stability Selection

(2012) Anne-Claire Haury et al.   BMC Systems Biology

Cyclin-dependent Kinase E1 (CDKE1) Provides a Cellular Switch in Plants between Growth and Stress Responses

(2012) Sophia Ng et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

The Mediator subunit SFR6/MED16 controls defence gene expression mediated by salicylic acid and jasmonate responsive pathways

(2012) Deepthi L. Wathugala et al.   NEW PHYTOLOGIST

Interactions between DNA, transcriptional regulator Dreb2a and the Med25 mediator subunit from Arabidopsis thaliana involve conformational changes

(2012) Jeanette Blomberg et al.   NUCLEIC ACIDS RESEARCH

The Arabidopsis Mediator Subunit MED25 Differentially Regulates Jasmonate and Abscisic Acid Signaling through Interacting with the MYC2 and ABI5 Transcription Factors

(2012) R. Chen et al.   PLANT CELL

Arabidopsis Class I and Class II TCP Transcription Factors Regulate Jasmonic Acid Metabolism and Leaf Development Antagonistically

(2012) S. Danisman et al.   PLANT PHYSIOLOGY

The role of Mediator in small and long noncoding RNA production inArabidopsis thaliana

(2011) Yun Ju Kim et al.   EMBO JOURNAL

The Mediator Complex in Plants: Structure, Phylogeny, and Expression Profiling of Representative Genes in a Dicot (Arabidopsis) and a Monocot (Rice) during Reproduction and Abiotic Stress

(2011) S. Mathur et al.   PLANT PHYSIOLOGY

The Arabidopsis thaliana Med25 mediator subunit integrates environmental cues to control plant development

(2011) N. Elfving et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Energy Signaling in the Regulation of Gene Expression during Stress

(2010) Elena Baena-González   Molecular Plant

Radically Rethinking Agriculture for the 21st Century

(2010) N. V. Fedoroff et al.   SCIENCE

DEAR1, a transcriptional repressor of DREB protein that mediates plant defense and freezing stress responses in Arabidopsis

(2009) Tomokazu Tsutsui et al.   JOURNAL OF PLANT RESEARCH

Roles for Arabidopsis CAMTA Transcription Factors in Cold-Regulated Gene Expression and Freezing Tolerance

(2009) C. J. Doherty et al.   PLANT CELL

REVEILLE1, a Myb-like transcription factor, integrates the circadian clock and auxin pathways

(2009) R. Rawat et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Comparative genomics supports a deep evolutionary origin for the large, four-module transcriptional mediator complex

(2008) Henri-Marc Bourbon   NUCLEIC ACIDS RESEARCH

Comparative Transcriptome of Diurnally Oscillating Genes and Hormone-Responsive Genes in Arabidopsis thaliana: Insight into Circadian Clock-Controlled Daily Responses to Common Ambient Stresses in Plants

(2008) Takeshi Mizuno et al.   PLANT AND CELL PHYSIOLOGY

Soybean WRKY-type transcription factor genes, GmWRKY13, GmWRKY21, and GmWRKY54, confer differential tolerance to abiotic stresses in transgenic Arabidopsis plants

(2008) Qi-Yun Zhou et al.   PLANT BIOTECHNOLOGY JOURNAL

Identification of SFR6, a key component in cold acclimation acting post-translationally on CBF function

(2008) Heather Knight et al.   PLANT JOURNAL

Maps of random walks on complex networks reveal community structure

(2008) M. Rosvall et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA