Deep learning enables accurate clustering with batch effect removal in single-cell RNA-seq analysis
出版年份 2020 全文链接
标题
Deep learning enables accurate clustering with batch effect removal in single-cell RNA-seq analysis
作者
关键词
-
出版物
Nature Communications
Volume 11, Issue 1, Pages -
出版商
Springer Science and Business Media LLC
发表日期
2020-05-11
DOI
10.1038/s41467-020-15851-3
参考文献
相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。- The single-cell transcriptional landscape of mammalian organogenesis
- (2019) Junyue Cao et al. NATURE
- Molecular Classification and Comparative Taxonomics of Foveal and Peripheral Cells in Primate Retina
- (2019) Yi-Rong Peng et al. CELL
- Efficient integration of heterogeneous single-cell transcriptomes using Scanorama
- (2019) Brian Hie et al. NATURE BIOTECHNOLOGY
- Batch effects in single-cell RNA-sequencing data are corrected by matching mutual nearest neighbors
- (2018) Laleh Haghverdi et al. NATURE BIOTECHNOLOGY
- Integrating single-cell transcriptomic data across different conditions, technologies, and species
- (2018) Andrew Butler et al. NATURE BIOTECHNOLOGY
- Deep generative modeling for single-cell transcriptomics
- (2018) Romain Lopez et al. NATURE METHODS
- Multiplexed droplet single-cell RNA-sequencing using natural genetic variation
- (2017) Hyun Min Kang et al. NATURE BIOTECHNOLOGY
- SC3: consensus clustering of single-cell RNA-seq data
- (2017) Vladimir Yu Kiselev et al. NATURE METHODS
- The Human Cell Atlas
- (2017) Aviv Regev et al. eLife
- Single-Cell Transcriptome Profiling of Human Pancreatic Islets in Health and Type 2 Diabetes
- (2016) Åsa Segerstolpe et al. Cell Metabolism
- De Novo Prediction of Stem Cell Identity using Single-Cell Transcriptome Data
- (2016) Dominic Grün et al. Cell Stem Cell
- Single-cell transcriptomes identify human islet cell signatures and reveal cell-type–specific expression changes in type 2 diabetes
- (2016) Nathan Lawlor et al. GENOME RESEARCH
- Identification of cell types from single-cell transcriptomes using a novel clustering method
- (2015) Chen Xu et al. BIOINFORMATICS
- Transcriptional Heterogeneity and Lineage Commitment in Myeloid Progenitors
- (2015) Franziska Paul et al. CELL
- Interferon-Beta Induces Distinct Gene Expression Response Patterns in Human Monocytes versus T cells
- (2013) Noa Henig et al. PLoS One
- Major Differences in the Responses of Primary Human Leukocyte Subsets to IFN-
- (2010) A. H. H. van Boxel-Dezaire et al. JOURNAL OF IMMUNOLOGY
- Fast unfolding of communities in large networks
- (2008) Vincent D Blondel et al. JOURNAL OF STATISTICAL MECHANICS-THEORY AND EXPERIMENT
- Maps of random walks on complex networks reveal community structure
- (2008) M. Rosvall et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
Discover Peeref hubs
Discuss science. Find collaborators. Network.
Join a conversationAdd your recorded webinar
Do you already have a recorded webinar? Grow your audience and get more views by easily listing your recording on Peeref.
Upload Now