A phylogenomic approach reveals a low somatic mutation rate in a long-lived plant

High marker density GWAS provides novel insights into the genomic architecture of terpene oil yield in Eucalyptus

(2019) David Kainer et al.   NEW PHYTOLOGIST

The architecture of intra-organism mutation rate variation in plants

(2019) Long Wang et al.   PLOS BIOLOGY

Do plants have a segregated germline?

(2018) Robert Lanfear   PLOS BIOLOGY

Patterns of Stem Cell Divisions Contribute to Plant Longevity

(2016) Agata Burian et al.   CURRENT BIOLOGY

Germline replications and somatic mutation accumulation are independent of vegetative life span inArabidopsis

(2016) J. Matthew Watson et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Interpreting the Dependence of Mutation Rates on Age and Time

(2016) Ziyue Gao et al.   PLOS BIOLOGY

Two New Fern Chloroplasts and Decelerated Evolution Linked to the Long Generation Time in Tree Ferns

(2014) B. Zhong et al.   Genome Biology and Evolution

High-resolution genetic maps ofEucalyptusimproveEucalyptus grandisgenome assembly

(2014) Jérôme Bartholomé et al.   NEW PHYTOLOGIST

NextGenMap: fast and accurate read mapping in highly polymorphic genomes

(2013) Fritz J. Sedlazeck et al.   BIOINFORMATICS

Differences in gene expression within a striking phenotypic mosaic Eucalyptus tree that varies in susceptibility to herbivory

(2013) Amanda Padovan et al.   BMC PLANT BIOLOGY

Estimation of the Spontaneous Mutation Rate per Nucleotide Site in a Drosophila melanogaster Full-Sib Family

(2013) Peter D. Keightley et al.   GENETICS

A definitive demonstration of fitness effects due to somatic mutation in a plant

(2013) D G Scofield   HEREDITY

Somatic deleterious mutation rate in a woody plant: estimation from phenotypic data

(2013) K Bobiwash et al.   HEREDITY

DeNovoGear: de novo indel and point mutation discovery and phasing

(2013) Avinash Ramu et al.   NATURE METHODS

Taller plants have lower rates of molecular evolution

(2013) Robert Lanfear et al.   Nature Communications

Estimate of the Spontaneous Mutation Rate in Chlamydomonas reinhardtii

(2012) Rob W. Ness et al.   GENETICS

Progress in Myrtaceae genetics and genomics: Eucalyptus as the pivotal genus

(2012) Dario Grattapaglia et al.   Tree Genetics & Genomes

A statistical framework for SNP calling, mutation discovery, association mapping and population genetical parameter estimation from sequencing data

(2011) H. Li   BIOINFORMATICS

phangorn: phylogenetic analysis in R

(2010) Klaus Peter Schliep   BIOINFORMATICS

Trends in ex situ conservation of plant genetic resources: a review of global crop and regional conservation strategies

(2010) Colin Khoury et al.   GENETIC RESOURCES AND CROP EVOLUTION

The Genome Analysis Toolkit: A MapReduce framework for analyzing next-generation DNA sequencing data

(2010) A. McKenna et al.   GENOME RESEARCH

The Rate and Molecular Spectrum of Spontaneous Mutations in Arabidopsis thaliana

(2010) S. Ossowski et al.   SCIENCE

Aging in a Long-Lived Clonal Tree

(2010) Dilara Ally et al.   PLOS BIOLOGY

Mutation Accumulation in Real Branches: Fitness Assays for Genomic Deleterious Mutation Rate and Effect in Large‐Statured Plants

(2009) Stewart T. Schultz et al.   AMERICAN NATURALIST

Rates of Molecular Evolution Are Linked to Life History in Flowering Plants

(2008) S. A. Smith et al.   SCIENCE