Large-scale metabarcoding analysis of epipelagic and mesopelagic copepods in the Pacific
出版年份 2020 全文链接
标题
Large-scale metabarcoding analysis of epipelagic and mesopelagic copepods in the Pacific
作者
关键词
Copepods, Taxonomy, Phylogeography, Latitude, Sequence analysis, Community structure, Zooplankton, Phylogenetics
出版物
PLoS One
Volume 15, Issue 5, Pages e0233189
出版商
Public Library of Science (PLoS)
发表日期
2020-05-15
DOI
10.1371/journal.pone.0233189
参考文献
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注意：仅列出部分参考文献，下载原文获取全部文献信息。- Marine environmental DNA biomonitoring reveals seasonal patterns in biodiversity and identifies ecosystem responses to anomalous climatic events
- (2019) Tina E. Berry et al. PLoS Genetics
- Global Trends in Marine Plankton Diversity across Kingdoms of Life
- (2019) Federico M. Ibarbalz et al. CELL
- Large-scale ocean connectivity and planktonic body size
- (2018) Ernesto Villarino et al. Nature Communications
- Latitudinal distribution of zooplankton communities in the Western Pacific along 160°E during summer 2014
- (2017) Dong Sun et al. JOURNAL OF MARINE SYSTEMS
- Evaluation of metagenetic community analysis of planktonic copepods using Illumina MiSeq: Comparisons with morphological classification and metagenetic analysis using Roche 454
- (2017) Junya Hirai et al. PLoS One
- OptiClust, an Improved Method for Assigning Amplicon-Based Sequence Data to Operational Taxonomic Units
- (2017) Sarah L. Westcott et al. mSphere
- Molecular Phylogeny and Revision of Copepod Orders (Crustacea: Copepoda)
- (2017) Sahar Khodami et al. Scientific Reports
- Metabarcoding of marine zooplankton: prospects, progress and pitfalls
- (2016) Ann Bucklin et al. JOURNAL OF PLANKTON RESEARCH
- Metagenetic community analysis of epipelagic planktonic copepods in the tropical and subtropical Pacific
- (2015) J Hirai et al. MARINE ECOLOGY PROGRESS SERIES
- Eukaryotic plankton diversity in the sunlit ocean
- (2015) C. de Vargas et al. SCIENCE
- Future vulnerability of marine biodiversity compared with contemporary and past changes
- (2015) Grégory Beaugrand et al. Nature Climate Change
- Metagenetic community analysis of epipelagic planktonic copepods in the tropical and subtropical Pacific
- (2015) J Hirai et al. MARINE ECOLOGY PROGRESS SERIES
- Trimmomatic: a flexible trimmer for Illumina sequence data
- (2014) Anthony M. Bolger et al. BIOINFORMATICS
- Multilocus evidence for globally distributed cryptic species and distinct populations across ocean gyres in a mesopelagic copepod
- (2014) Kimberly R. Andrews et al. MOLECULAR ECOLOGY
- A metagenetic approach for revealing community structure of marine planktonic copepods
- (2014) J. Hirai et al. Molecular Ecology Resources
- MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability
- (2013) K. Katoh et al. MOLECULAR BIOLOGY AND EVOLUTION
- MEGA6: Molecular Evolutionary Genetics Analysis Version 6.0
- (2013) Koichiro Tamura et al. MOLECULAR BIOLOGY AND EVOLUTION
- High evolutionary potential of marine zooplankton
- (2013) Katja T. C. A. Peijnenburg et al. Ecology and Evolution
- Pole-to-pole biogeography of surface and deep marine bacterial communities
- (2012) J.-F. Ghiglione et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- UCHIME improves sensitivity and speed of chimera detection
- (2011) Robert C. Edgar et al. BIOINFORMATICS
- Molecular phylogeny of the Calanoida (Crustacea: Copepoda)
- (2011) Leocadio Blanco-Bercial et al. MOLECULAR PHYLOGENETICS AND EVOLUTION
- DNA Barcoding of Marine Metazoa
- (2010) Ann Bucklin et al. Annual Review of Marine Science
- Copepod abundance and species composition in the Eastern subtropical/tropical Atlantic
- (2010) Sigrid B. Schnack-Schiel et al. DEEP-SEA RESEARCH PART II-TOPICAL STUDIES IN OCEANOGRAPHY
- A “Rosetta Stone” for metazoan zooplankton: DNA barcode analysis of species diversity of the Sargasso Sea (Northwest Atlantic Ocean)
- (2010) Ann Bucklin et al. DEEP-SEA RESEARCH PART II-TOPICAL STUDIES IN OCEANOGRAPHY
- Species diversity and vertical distribution of the deep-sea copepods of the genus Euaugaptilus in the Sulu and Celebes Seas
- (2010) Hiroyuki Matsuura et al. DEEP-SEA RESEARCH PART II-TOPICAL STUDIES IN OCEANOGRAPHY
- A multivariate approach to large-scale variation in marine planktonic copepod diversity and its environmental correlates
- (2010) Isabelle Rombouts et al. LIMNOLOGY AND OCEANOGRAPHY
- Global patterns and predictors of marine biodiversity across taxa
- (2010) Derek P. Tittensor et al. NATURE
- Introducing mothur: Open-Source, Platform-Independent, Community-Supported Software for Describing and Comparing Microbial Communities
- (2009) P. D. Schloss et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- The copepod communities of the north and south Pacific central gyres and the form of species-abundance distributions
- (2009) M. Williamson et al. JOURNAL OF PLANKTON RESEARCH
- Evidence for middle Eocene Arctic sea ice from diatoms and ice-rafted debris
- (2009) Catherine E. Stickley et al. NATURE
- Global latitudinal variations in marine copepod diversity and environmental factors
- (2009) I. Rombouts et al. PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES
- In hot water: zooplankton and climate change
- (2008) A. J. Richardson ICES JOURNAL OF MARINE SCIENCE
- The age and origin of the Pacific islands: a geological overview
- (2008) V. E Neall et al. PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES
- Stage-V copepodites of Calanus sinicus and Calanus jashnovi (Copepoda: Calanoida) in mesopelagic zone of Sagami Bay as identified with genetic markers, with special reference to their vertical distribution
- (2008) Takumi Nonomura et al. PROGRESS IN OCEANOGRAPHY
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