An aminoacylation ribozyme evolved from a natural tRNA-sensing T-box riboswitch

An evolving tale of two interacting RNAs-themes and variations of the T-box riboswitch mechanism

(2019) Krishna C. Suddala et al.   IUBMB LIFE

Structural basis of amino acid surveillance by higher-order tRNA-mRNA interactions

(2019) Shuang Li et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY

Nonproteinogenic deep mutational scanning of linear and cyclic peptides

(2018) Joseph M. Rogers et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

A ribonucleopeptide world at the origin of life

(2017) Nizar Y. Saad   Journal of Systematics and Evolution

High-Throughput Mutational Analysis of a Twister Ribozyme

(2016) Shungo Kobori et al.   ANGEWANDTE CHEMIE-INTERNATIONAL EDITION

tRid, an enabling method to isolate previously inaccessible small RNA fractions

(2016) Kazuki Futai et al.   METHODS

Codon-Anticodon Recognition in theBacillus subtilis glyQST Box Riboswitch

(2015) Enrico Caserta et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

GtRNAdb 2.0: an expanded database of transfer RNA genes identified in complete and draft genomes

(2015) Patricia P. Chan et al.   NUCLEIC ACIDS RESEARCH

Highly Efficient Self-Replicating RNA Enzymes

(2014) Michael P. Robertson et al.   CHEMISTRY & BIOLOGY

Direct Evaluation of tRNA Aminoacylation Status by the T-Box Riboswitch Using tRNA-mRNA Stacking and Steric Readout

(2014) Jinwei Zhang et al.   MOLECULAR CELL

Nonstandard Peptide Expression under the Genetic Code Consisting of Reprogrammed Dual Sense Codons

(2013) Yuki Goto et al.   ACS Chemical Biology

Co-crystal structure of a T-box riboswitch stem I domain in complex with its cognate tRNA

(2013) Jinwei Zhang et al.   NATURE

Two-codon T-box riboswitch binding two tRNAs

(2013) N. Y. Saad et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

T box RNA decodes both the information content and geometry of tRNA to affect gene expression

(2013) J. C. Grigg et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Structural Determinants for Geometry and Information Decoding of tRNA by T Box Leader RNA

(2013) Jason C. Grigg et al.   STRUCTURE

Flexizymes for genetic code reprogramming

(2011) Yuki Goto et al.   Nature Protocols

The RNP bridge between two worlds

(2011) Paul Schimmel   NATURE REVIEWS MOLECULAR CELL BIOLOGY

A flexizyme that selectively charges amino acids activated by a water-friendly leaving group

(2009) Nobuyoshi Niwa et al.   BIOORGANIC & MEDICINAL CHEMISTRY LETTERS

Biochemical Features and Functional Implications of the RNA-Based T-Box Regulatory Mechanism

(2009) A. Gutierrez-Preciado et al.   MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS

Diverse backbone-cyclized peptides via codon reprogramming

(2009) Takashi Kawakami et al.   Nature Chemical Biology

CENTROIDFOLD: a web server for RNA secondary structure prediction

(2009) K. Sato et al.   NUCLEIC ACIDS RESEARCH

Reprogramming the Translation Initiation for the Synthesis of Physiologically Stable Cyclic Peptides

(2008) Yuki Goto et al.   ACS Chemical Biology

Messenger RNA-Programmed Incorporation of Multiple N-Methyl-Amino Acids into Linear and Cyclic Peptides

(2008) Takashi Kawakami et al.   CHEMISTRY & BIOLOGY

The many applications of acid urea polyacrylamide gel electrophoresis to studies of tRNAs and aminoacyl-tRNA synthetases

(2008) Caroline Köhrer et al.   METHODS

Structural basis of specific tRNA aminoacylation by a small in vitro selected ribozyme

(2008) Hong Xiao et al.   NATURE

Comparative genomic analysis of T-box regulatory systems in bacteria

(2008) A. G. Vitreschak et al.   RNA