Single-cell chromatin accessibility maps reveal regulatory programs driving early mouse organogenesis
出版年份 2020 全文链接
标题
Single-cell chromatin accessibility maps reveal regulatory programs driving early mouse organogenesis
作者
关键词
-
出版物
NATURE CELL BIOLOGY
Volume 22, Issue 4, Pages 487-497
出版商
Springer Science and Business Media LLC
发表日期
2020-03-31
DOI
10.1038/s41556-020-0489-9
参考文献
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注意:仅列出部分参考文献,下载原文获取全部文献信息。- A single-cell molecular map of mouse gastrulation and early organogenesis
- (2019) Blanca Pijuan-Sala et al. NATURE
- The single-cell transcriptional landscape of mammalian organogenesis
- (2019) Junyue Cao et al. NATURE
- cisTopic: cis-regulatory topic modeling on single-cell ATAC-seq data
- (2019) Carmen Bravo González-Blas et al. NATURE METHODS
- A 3D Atlas of Hematopoietic Stem and Progenitor Cell Expansion by Multi-dimensional RNA-Seq Analysis
- (2019) Yuanyuan Xue et al. Cell Reports
- Visualizing structure and transitions in high-dimensional biological data
- (2019) Kevin R. Moon et al. NATURE BIOTECHNOLOGY
- Defining murine organogenesis at single-cell resolution reveals a role for the leukotriene pathway in regulating blood progenitor formation
- (2018) Ximena Ibarra-Soria et al. NATURE CELL BIOLOGY
- Single-nucleus analysis of accessible chromatin in developing mouse forebrain reveals cell-type-specific transcriptional regulation
- (2018) Sebastian Preissl et al. NATURE NEUROSCIENCE
- Single-cell transcriptional profiling: a window into embryonic cell-type specification
- (2018) Blanca Pijuan-Sala et al. NATURE REVIEWS MOLECULAR CELL BIOLOGY
- The cis-regulatory dynamics of embryonic development at single-cell resolution
- (2018) Darren A. Cusanovich et al. NATURE
- Joint profiling of chromatin accessibility and gene expression in thousands of single cells
- (2018) Junyue Cao et al. SCIENCE
- GATA transcription factors in development and disease
- (2018) Mathieu Tremblay et al. DEVELOPMENT
- Tissue-specific CTCF–cohesin-mediated chromatin architecture delimits enhancer interactions and function in vivo
- (2017) Lars L. P. Hanssen et al. NATURE CELL BIOLOGY
- chromVAR: inferring transcription-factor-associated accessibility from single-cell epigenomic data
- (2017) Alicia N Schep et al. NATURE METHODS
- An improved ATAC-seq protocol reduces background and enables interrogation of frozen tissues
- (2017) M Ryan Corces et al. NATURE METHODS
- ETS transcription factors in embryonic vascular development
- (2016) Michael P. Craig et al. ANGIOGENESIS
- Complex regulation of HSC emergence by the Notch signaling pathway
- (2016) Emerald Butko et al. DEVELOPMENTAL BIOLOGY
- Dynamic Gene Regulatory Networks Drive Hematopoietic Specification and Differentiation
- (2016) Debbie K. Goode et al. DEVELOPMENTAL CELL
- Hematopoietic stem cell-independent hematopoiesis: emergence of erythroid, megakaryocyte, and myeloid potential in the mammalian embryo
- (2016) James Palis FEBS LETTERS
- Genetic dissection of the α-globin super-enhancer in vivo
- (2016) Deborah Hay et al. NATURE GENETICS
- Induction of hematopoietic and endothelial cell program orchestrated by ETS transcription factor ER71/ETV2
- (2015) F. Liu et al. EMBO REPORTS
- Multiplex single-cell profiling of chromatin accessibility by combinatorial cellular indexing
- (2015) D. A. Cusanovich et al. SCIENCE
- Genome-wide analysis of transcriptional regulators in human HSPCs reveals a densely interconnected network of coding and noncoding genes
- (2013) D. Beck et al. BLOOD
- Fev regulates hematopoietic stem cell development via ERK signaling
- (2013) L. Wang et al. BLOOD
- Fast gapped-read alignment with Bowtie 2
- (2012) Ben Langmead et al. NATURE METHODS
- Etv2 Is Expressed in the Yolk Sac Hematopoietic and Endothelial Progenitors and Regulates Lmo2 Gene Expression
- (2012) Naoko Koyano-Nakagawa et al. STEM CELLS
- Combinatorial Transcriptional Control In Blood Stem/Progenitor Cells: Genome-wide Analysis of Ten Major Transcriptional Regulators
- (2010) Nicola K. Wilson et al. Cell Stem Cell
- Gata3 regulates trophoblast development downstream of Tead4 and in parallel to Cdx2
- (2010) A. Ralston et al. DEVELOPMENT
- Simple Combinations of Lineage-Determining Transcription Factors Prime cis-Regulatory Elements Required for Macrophage and B Cell Identities
- (2010) Sven Heinz et al. MOLECULAR CELL
- A Runx1 Intronic Enhancer Marks Hemogenic Endothelial Cells and Hematopoietic Stem Cells
- (2010) Cherry Ee Lin Ng et al. STEM CELLS
- Expression of the leukemia oncogene Lmo2 is controlled by an array of tissue-specific elements dispersed over 100 kb and bound by Tal1/Lmo2, Ets, and Gata factors
- (2009) J.-R. Landry et al. BLOOD
- Redefining the Progression of Lineage Segregations during Mammalian Embryogenesis by Clonal Analysis
- (2009) Elena Tzouanacou et al. DEVELOPMENTAL CELL
- Model-based Analysis of ChIP-Seq (MACS)
- (2008) Yong Zhang et al. GENOME BIOLOGY
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