4.7 Article

Design of a confined environment using protein cages and crystals for the development of biohybrid materials

期刊

CHEMICAL COMMUNICATIONS
卷 52, 期 39, 页码 6496-6512

出版社

ROYAL SOC CHEMISTRY
DOI: 10.1039/c6cc01355d

关键词

-

资金

  1. Funding Program for Next Generation World-Leading Researchers
  2. Ministry of Education, Culture, Sports, Science and Technology, Japan
  3. Grants-in-Aid for Scientific Research [26620130] Funding Source: KAKEN

向作者/读者索取更多资源

There is growing interest in the design of protein assemblies for use in materials science and bionano-technology. Protein assemblies, such as cages and crystalline protein structures, provide confined chemical environments that allow immobilization of metal complexes, nanomaterials, and proteins by metal coordination, assembly/disassembly reactions, genetic manipulation and crystallization methods. Protein assembly composites can be used to prepare hybrid materials with catalytic, magnetic and optical properties for cellular applications due to their high stability, solubility and biocompatibility. In this feature article, we focus on the recent development of ferritin as the most promising molecular template protein cage and in vivo and in vitro engineering of protein crystals as solid protein materials with functional properties.

作者

我是这篇论文的作者
点击您的名字以认领此论文并将其添加到您的个人资料中。

评论

主要评分

4.7
评分不足

次要评分

新颖性
-
重要性
-
科学严谨性
-
评价这篇论文

推荐

Article Peripheral Vascular Disease

Catheter-based ultrasound renal denervation in patients with resistant hypertension: the randomized, controlled REQUIRE trial

Kazuomi Kario, Yoshiaki Yokoi, Keisuke Okamura, Masahiko Fujihara, Yukako Ogoyama, Eiichiro Yamamoto, Hidenori Urata, Jin-Man Cho, Chong-Jin Kim, Seung-Hyuk Choi, Keisuke Shinohara, Yasushi Mukai, Tomokazu Ikemoto, Masato Nakamura, Shuichi Seki, Satoaki Matoba, Yoshisato Shibata, Shigeo Sugawara, Kazuhiko Yumoto, Kouichi Tamura, Fumiki Yoshihara, Satoko Nakamura, Woong Chol Kang, Taro Shibasaki, Keigo Dote, Hiroyoshi Yokoi, Akiko Matsuo, Hiroshi Fujita, Toshiyuki Takahashi, Hyun-Jae Kang, Yasushi Sakata, Kazunori Horie, Naoto Inoue, Ken-ichiro Sasaki, Takafumi Ueno, Hirofumi Tomita, Yoshihiro Morino, Yuhei Nojima, Chan Joon Kim, Tomoaki Matsumoto, Hisashi Kai, Shinsuke Nanto

Summary: This study found no significant difference in ambulatory blood pressure reductions between renal denervation and a sham procedure in treated patients with resistant hypertension. Although the blood pressure reduction after renal denervation was similar to other sham-controlled studies, the unexpected greater reduction in the sham control group in this study highlights design issues that will be addressed in a new trial.

HYPERTENSION RESEARCH (2022)

Article Chemistry, Multidisciplinary

Importance of the Subunit-Subunit Interface in Ferritin Disassembly: A Molecular Dynamics Study

Zhipeng Li, Basudev Maity, Yuki Hishikawa, Takafumi Ueno, Diannan Lu

Summary: By conducting molecular dynamics simulations at different pH values, we studied how interfaces affect the stability of ferritins and the mechanism of ferritin disassembly. The simulations revealed that the dimer is the essential subunit for disassembly, and the slight swelling of the dimer resulting from monomer rotation triggers disassembly. The interface between dimers plays a crucial role in ferritin disassembly. The protonation of residues at low pH leads to the loss of salt bridges and hydrogen bonds between dimers, resulting in ferritin disassembly in an acidic environment.

LANGMUIR (2022)

Article Chemistry, Multidisciplinary

Protein Needles Designed to Self-Assemble through Needle Tip Engineering

Kosuke Kikuchi, Tatsuya Fukuyama, Takayuki Uchihashi, Tadaomi Furuta, Yusuke T. Maeda, Takafumi Ueno

Summary: The dynamic process of protein assembly is essential for highly ordered structures in biological systems. This study shows the control of the 2D assembly pattern of protein needles by regulating their tip-to-tip interactions. The findings provide a new strategy for constructing supramolecular protein architectures.
Review Materials Science, Biomaterials

Engineering of protein crystals for use as solid biomaterials

Mariko Kojima, Satoshi Abe, Takafumi Ueno

Summary: Protein crystals are of interest as solid biomaterials due to their porous structures and ability to immobilize foreign molecules, such as metal nanoparticles and complexes. Hybrid crystals are used for catalytic reactions and structural analysis, while in-cell protein crystals have advanced rapid crystallization and crystallography techniques. Crystal engineering for protein crystallization is advancing both in vitro and within cells.

BIOMATERIALS SCIENCE (2022)

Article Cardiac & Cardiovascular Systems

CVIT expert consensus document on primary percutaneous coronary intervention (PCI) for acute myocardial infarction (AMI) update 2022

Yukio Ozaki, Hironori Hara, Yoshinobu Onuma, Yuki Katagiri, Tetsuya Amano, Yoshio Kobayashi, Takashi Muramatsu, Hideki Ishii, Ken Kozuma, Nobuhiro Tanaka, Hitoshi Matsuo, Shiro Uemura, Kazushige Kadota, Yutaka Hikichi, Kenichi Tsujita, Junya Ako, Yoshihisa Nakagawa, Yoshihiro Morino, Ichiro Hamanaka, Nobuo Shiode, Junya Shite, Junko Honye, Tetsuo Matsubara, Kazuya Kawai, Yasumi Igarashi, Atsunori Okamura, Takayuki Ogawa, Yoshisato Shibata, Takafumi Tsuji, Junji Yajima, Kaoru Iwabuchi, Nobuo Komatsu, Teruyasu Sugano, Masaru Yamaki, Shinichiro Yamada, Hiroaki Hirase, Yuusuke Miyashita, Fuminobu Yoshimachi, Masakazu Kobayashi, Jiro Aoki, Hirotaka Oda, Yoshiaki Katahira, Kinzo Ueda, Masami Nishino, Koichi Nakao, Ichiro Michishita, Takafumi Ueno, Taku Inohara, Shun Kohsaka, Tevfik F. Ismail, Patrick W. Serruys, Masato Nakamura, Hiroyoshi Yokoi, Yuji Ikari

Summary: Primary Percutaneous Coronary Intervention (PCI) plays a crucial role in the management of myocardial infarction patients, and updated guidelines have introduced changes such as recommending radial access and drug-eluting stents, as well as emphasizing the importance of complete revascularization.

CARDIOVASCULAR INTERVENTION AND THERAPEUTICS (2022)

Correction Cardiac & Cardiovascular Systems

Single Antiplatelet Therapy With Prasugrel vs. Dual Antiplatelet Therapy in Japanese Percutaneous Coronary Intervention Patients With High Bleeding Risk (vol 85, pg 785, 2021)

Masato Nakamura, Kazushige Kadota, Koichi Nakao, Yoshihisa Nakagawa, Junya Shite, Hiroyoshi Yokoi, Ken Kozuma, Kengo Tanabe, Takashi Akasaka, Toshiro Shinke, Takafumi Ueno, Atsushi Hirayama, Shiro Uemura, Atsushi Harada, Takeshi Kuroda, Atsushi Takita, Raisuke Iijima, Yoshitaka Murakami, Shigeru Saito

CIRCULATION JOURNAL (2022)

Article Cardiac & Cardiovascular Systems

Early P2Y12 Inhibitor Single Antiplatelet Therapy for High-Bleeding Risk Patients After Stenting-PENDULUM Mono 24-Month Analysis

Yoshihisa Nakagawa, Kazushige Kadota, Koichi Nakao, Junya Shite, Hiroyoshi Yokoi, Ken Kozuma, Kengo Tanabe, Takashi Akasaka, Toshiro Shinke, Takafumi Ueno, Atsushi Hirayama, Shiro Uemura, Raisuke Iijima, Atsushi Harada, Takeshi Kuroda, Atsushi Takita, Yoshitaka Murakami, Shigeru Saito, Masato Nakamura

Summary: Japanese PCI patients with high bleeding risk who received prasugrel SAPT after short-term DAPT had lower ischemic event risk compared to those prescribed long-term DAPT, particularly after 1 year.

CIRCULATION JOURNAL (2022)

Editorial Material Cardiac & Cardiovascular Systems

Stent inflammation and PCI complications in end-stage chronic kidney disease

Nobuhiro Tahara, Atsuko Tahara, Shoko Maeda-Ogata, Hanae Yoshimura, Munehisa Bekki, Yoichi Sugiyama, Akihiro Honda, Sachiyo Igata, Hidetoshi Chibana, Toshi Abe, Takafumi Ueno, Yoshihiro Fukumoto

JOURNAL OF NUCLEAR CARDIOLOGY (2023)

Article Chemistry, Multidisciplinary

Design of a Hierarchical Assembly at a Solid-Liquid Interface Using an Asymmetric Protein Needle

Kosuke Kikuchi, Koki Date, Takafumi Ueno

Summary: In this study, a hierarchical protein assembly system with two distinct protein-protein interaction sites was constructed using an anisotropic-shaped protein needle. High-speed atomic force microscopy measurements showed the formation of unique tetrameric clusters through the N-terminal head of the protein on a mica surface. These clusters further self-assembled into a monolayer structure through the C-terminal His-tag. The results expand the toolbox for constructing hierarchical protein assemblies based on structural anisotropy.

LANGMUIR (2023)

Article Materials Science, Biomaterials

Engineering of an in-cell protein crystal for fastening a metastable conformation of a target miniprotein

Mariko Kojima, Satoshi Abe, Tadaomi Furuta, Duy Phuoc Tran, Kunio Hirata, Keitaro Yamashita, Yuki Hishikawa, Akio Kitao, Takafumi Ueno

Summary: Protein crystals can serve as porous scaffolds for capturing exogenous molecules. Fixing target proteins in the pores of scaffold protein crystals has been challenging due to limited strategies to control protein-protein interactions. This study successfully fixes a miniprotein within a polyhedra crystal scaffold, revealing the potential of modulating intermolecular interactions for trapping various protein conformations.

BIOMATERIALS SCIENCE (2023)

Article Chemistry, Multidisciplinary

Elucidating Conformational Dynamics and Thermostability of Designed Aromatic Clusters by Using Protein Cages

Yuki Hishikawa, Hiroki Noya, Satoru Nagatoishi, Takashi Yoshidome, Basudev Maity, Kouhei Tsumoto, Satoshi Abe, Takafumi Ueno

Summary: This study investigates the impact of aromatic clusters on protein stability by studying designed aromatic interactions within a protein cage. The results show that inter-subunit phenylalanine clusters enhance interhelix interactions and increase melting temperature. Theoretical calculations suggest that this is due to a transformation from T-shaped geometry to pi-pi stacking and hydration entropic gain at high temperatures. The isolated nanoenvironment within a protein cage allows for detailed analysis of multiple clustering residues, providing insights into biomolecular interactions and potential applications in bionanomaterial design.

CHEMISTRY-A EUROPEAN JOURNAL (2023)

Article Chemistry, Inorganic & Nuclear

Cross-Linked Crystals of Dirhodium Tetraacetate/RNase A Adduct Can Be Used as Heterogeneous Catalysts

Antonello Merlino, Takafumi Ueno, Domenico Loreto, Basudev Maity, Taiki Morita, Hiroyuki Nakamura

Summary: Due to their unique coordination structure, dirhodium paddlewheel complexes have attracted interest in various research fields, such as medicinal chemistry and catalysis. Previous studies have focused on conjugating these complexes to proteins and peptides to develop artificial metalloenzymes. However, this work explores the fixation of dirhodium complexes into protein crystals to create heterogeneous catalysts. The results show that these biohybrid materials can be used as effective catalysts for reactions in aqueous solutions.

INORGANIC CHEMISTRY (2023)

Article Nanoscience & Nanotechnology

Apo-ferritin-Caged Pt Nanoparticles for Selective Hydrogenation of p-Chloronitrobenzene

Yinhuan Zhou, Yilin Zheng, Chenlin Lu, Basudev Maity, Yakui Chen, Takafumi Ueno, Zheng Liu, Diannan Lu

Summary: Synthesis of apo-ferritin-caged Pt nanoparticles at room temperature is able to efficiently convert p-chloronitrobenzene to p-chloroaniline with high selectivity of 99% and inhibit dechlorination reactions. The catalysts show a ten times higher TOF value compared to unloaded platinum nanocatalyst, and the unique size effect and electronic effect due to the interaction between apo-ferritin and platinum are the main reasons for the performance enhancement.

ACS APPLIED NANO MATERIALS (2023)

Article Chemistry, Multidisciplinary

In-Cell Engineering of Protein Crystals into Hybrid Solid Catalysts for Artificial Photosynthesis

Tiezheng Pan, Basudev Maity, Satoshi Abe, Taiki Morita, Takafumi Ueno

Summary: The emergence of protein-based crystalline materials provides promising opportunities for enzyme immobilization. This study demonstrates the use of polyhedra crystals to simultaneously encapsulate the foreign enzymes FDH and the organic photocatalyst eosin Y. These hybrid protein crystals, prepared easily by cocrystallization within a cell, form solid particles at a scale of 1 μm without the need for complex purification processes. The immobilized FDH within protein crystals exhibits recyclability, thermal stability, and maintains 94.4% activity compared to the free enzyme. Additionally, the incorporation of eosin Y enables CO(2)-formate conversion activity in the solid catalyst through a cascade reaction. This work highlights the potential of engineering protein crystals for the development of robust and environmentally friendly solid catalysts for artificial photosynthesis.

NANO LETTERS (2023)

Article Chemistry, Multidisciplinary

Displaying a Protein Cage on a Protein Crystal by In-Cell Crystal Engineering

Thuc Toan Pham, Satoshi Abe, Koki Date, Kunio Hirata, Taiga Suzuki, Takafumi Ueno

Summary: The development of solid biomaterials in bionanotechnology has made rapid progress recently. This study presents a novel approach to displaying protein cages onto a crystalline protein scaffold using in-cell protein crystal engineering, providing a new method for immobilizing protein assemblies.

NANO LETTERS (2023)

Review Chemistry, Multidisciplinary

Trap suppression in ordered organic photovoltaic heterojunctions

Dan He, Yawen Li, Fuwen Zhao, Yuze Lin

Summary: High trap density in organic solar cells leads to localized charge carriers and reduced carrier lifetime, limiting device efficiency. This feature article summarizes the recent advances of trap suppression by material design and device engineering.

CHEMICAL COMMUNICATIONS (2024)

Review Chemistry, Multidisciplinary

Controversial mechanism of simultaneous photocatalysis and Fenton-based processes: additional effect or synergy?

Olivier Monfort, Arshitha Madhusudhan, Martin Motola

Summary: This article presents the advantages of coupling photocatalysis and Fenton-based processes for environmental remediation and discusses their synergy. It critically examines the simultaneous triggering of these two processes and provides insights into research approaches. The study aims to enhance understanding of this complex process and highlight the potential integration of new catalysts in current wastewater treatment technology.

CHEMICAL COMMUNICATIONS (2024)

Article Chemistry, Multidisciplinary

Polymerization of monomer aggregates for tailoring and patterning water wettability

Manideepa Dhar, Chittaranjan Mishra, Avijit Das, Uttam Manna

Summary: An approach of 'polymerization of monomers in its aggregated form' has been introduced to tailor the water wettability of fibrous and porous substrates, achieving hydrophobicity to superhydrophobicity transition, as well as patterned wettability. This facile chemical method provides a durable coating with adjustable and patterned wettability for various potential applications.

CHEMICAL COMMUNICATIONS (2024)

Article Chemistry, Multidisciplinary

Pd/Brønsted acid catalysed intramolecular N-allylation of indoles and pyrroles with alkynes for the synthesis of N-fused heterocycles

Saswat Ranjan Bhoi, Chhanda Debnath, Shikha Gandhi

Summary: In this article, a novel catalytic reaction using Pd(0) and Bronsted acid is reported for the synthesis of biologically important imidazolidinone-fused N-heterocycles through redox-neutral intramolecular N-allylation of indoles and pyrroles with alkynes. This atom-economical method is applicable to a wide range of substrates and eliminates the need for leaving groups or oxidizing agents commonly used in traditional allylation reactions.

CHEMICAL COMMUNICATIONS (2024)

Article Chemistry, Multidisciplinary

Rh(III)-catalyzed selective mono- and dual-functionalization/cyclization of 1-aryl-5-aminopyrazoles with iodonium ylides

Longkun Chen, Mingshuai Zhang, Meichen Liu, Zhuoyuan Liu, Yuetong Qiu, Zhilai Zhang, Fuchao Yu, Jiuzhong Huang

Summary: In this study, an efficient Rh(III)-catalyzed selective mono- and dual-C-H bond functionalization/cyclization with iodonium ylide as the sole coupling partner was demonstrated. Fused benzodiazepine skeletons were obtained in excellent yields, providing an improved approach to dual C-H unsymmetrical functionalization.

CHEMICAL COMMUNICATIONS (2024)

Article Chemistry, Multidisciplinary

Modified minimal-size fragments of heparan sulfate as inhibitors of endosulfatase-2 (Sulf-2)

Alice Kennett, Sven Epple, Gabriella van der Valk, Irene Georgiou, Evelyne Gout, Romain R. Vives, Angela J. Russell

Summary: This study presents the design and synthesis of sulfated disaccharide inhibitors based on IdoA(2S)-GlcNS(6S), which showed potent inhibition of Sulf-2. The results suggest that IdoA(2S)-GlcNS(6S) is the shortest fragment size required for effective inhibition of Sulfs, and a trisulfated disaccharide is identified as the minimal fragment size of heparan sulfate for effective endosulfatase inhibition.

CHEMICAL COMMUNICATIONS (2024)

Article Chemistry, Multidisciplinary

Reductive cyclodimerization of chalcones: exploring the self-adaptability of galvanostatic electrosynthesis

Mauro Garbini, Andrea Brunetti, Riccardo Pedrazzani, Magda Monari, Massimo Marcaccio, Giulio Bertuzzi, Marco Bandini

Summary: The self-adaptability of galvanostatic electrolysis was found to be helpful in a multistage chemo- and diastereoselective electrochemically promoted cyclodimerization of chalcones. Through a series of reductive events, densely functionalized cyclopentanes with five contiguous stereocenters were obtained (25 examples, yields up to 95%, dr values up to >20:1). Further experimental and electrochemical investigations indicated the crucial role of dynamic kinetic resolution of the aldol intermediate in the reaction mechanism.

CHEMICAL COMMUNICATIONS (2024)

Article Chemistry, Multidisciplinary

Rh(III)-catalyzed oxidative [4+2] annulation of 2-arylquinoxalines and 2-aryl-2H-indazoles with allyl alcohols

Dhananjay S. Nipate, Neha Meena, Prakash N. Swami, Krishnan Rangan, Anil Kumar

Summary: In this study, the synthesis of functionalized benzo[a]phenazines and indazolo[2,3-a]quinolines was achieved through Rh(III)-catalyzed oxidative annulation of 2-arylquinoxalines and 2-aryl-2H-indazoles with allyl alcohols. The method showed a wide substrate scope, excellent functional group tolerance, good to high yields of annulated products, and the capability for scaled-up synthesis. A tentative mechanism of the annulation reaction was proposed based on a preliminary mechanistic investigation.

CHEMICAL COMMUNICATIONS (2024)

Article Chemistry, Multidisciplinary

PbTeB4O9: a lead tellurium borate with unprecedented fundamental building block [B4O10] and large birefringence

Ruonan Zhang, Abudukadi Tudi, Xia Yang, Xuping Wang, Zhihua Yang, Shujuan Han, Shilie Pan

Summary: A new lead tellurium borate material with a unique fundamental building block [B4O10] was synthesized and found to exhibit high birefringence. The structure-property relationship was discussed using first-principles calculations.

CHEMICAL COMMUNICATIONS (2024)

Article Chemistry, Multidisciplinary

Wafer-scale synthesis of two-dimensional ultrathin films

Amresh Kumar Singh, Baishali Thakurta, Anupam Giri, Monalisa Pal

Summary: This study introduces three key concepts for the quick synthesis of large-scale high-quality 2D materials films and their utilization in device fabrication.

CHEMICAL COMMUNICATIONS (2024)

Article Chemistry, Multidisciplinary

Precise design of copolymer-conjugated nanocatalysts for active electron transfer

Reina Hagiwara, Shun Nishimura, Kosuke Okeyoshi

Summary: A copolymer-conjugated nanocatalytic system has been developed to improve electron transfer and enhance photoinduced H2 generation.

CHEMICAL COMMUNICATIONS (2024)