Article
Biochemical Research Methods
Adam Pap, Istvan Elod Kiraly, Katalin F. Medzihradszky, Zsuzsanna Darula
Summary: While N-glycopeptides are relatively easier to characterize, the complexity of O-glycosylation analysis stems from its multi-layered nature. This study presents a carefully curated dataset of intact human glycopeptide mixtures, highlighting the diversity of site-specific O-glycosylation. Manual evaluation of existing tools with the data leads to recommendations for improving the reliability of glycopeptide assignments.
MOLECULAR & CELLULAR PROTEOMICS
(2022)
Article
Chemistry, Analytical
Mathieu Lamarre, Thomas Tremblay, Marc-Antoine Bansept, Karine Robitaille, Vincent Fradet, Denis Giguere, Denis Boudreau
Summary: In this study, a sensor immobilized with Tn antigen on a surface coated with polydopamine/polyethylene oxide showed high reliability and sensitivity in prostate cancer diagnostics. Detection limits of anti-Tn antibodies were validated in different concentration ranges and successfully used to discriminate blood serum samples from prostate cancer patients and cancer-free individuals.
Article
Pharmacology & Pharmacy
Katarzyna Supruniuk, Robert Czarnomysy, Anna Muszynska, Iwona Radziejewska
Summary: The study assessed the effectiveness of different compounds on apoptotic response and cancer-related sugar antigens in gastric cancer cells, showing that PtPz6 in combination with anti-MUC1 had the strongest apoptotic response. The combination of cisplatin derivatives with anti-MUC1 was more effective than monotherapy.
Article
Chemistry, Multidisciplinary
Carlo Pifferi, Leire Aguinagalde, Ane Ruiz-de-Angulo, Nagore Sacristan, Priscila Tonon Baschirotto, Ana Poveda, Jesus Jimenez-Barbero, Juan Anguita, Alberto Fernandez-Tejada
Summary: The overexpression of aberrantly glycosylated tumor-associated mucin-1 (TA-MUC1) in human cancers makes it a major target for the development of anticancer vaccines derived from synthetic MUC1-(glyco)peptide antigens. However, glycopeptide-based subunit vaccines are weakly immunogenic, requiring adjuvants and/or additional immunopotentiating approaches to generate optimal immune responses.
Article
Chemistry, Multidisciplinary
Hongyue Yu, Yan Yu, Runfeng Lin, Minchao Liu, Qiaoyu Zhou, Mengli Liu, Liang Chen, Wenxing Wang, Ahmed A. Elzatahry, Dongyuan Zhao, Xiaomin Li
Summary: A camouflaged virus-like nanocarrier with a transformable rough surface composed of a mesoporous SiO2 nanoparticle and an acid-responsive polymer is reported. Under normal pH conditions, the spikes on the nanocarrier are hidden by the polymer shell, inhibiting non-specific strong nano-bio interactions. In an acidic tumor microenvironment, the nanocarrier sheds the polymer camouflage to expose its rough surface, improving retention ability and endocytosis efficiency. The rationally designed nanocarrier exhibits extended blood circulation time and enhanced tumor accumulation due to its dynamically variable rough surface.
ANGEWANDTE CHEMIE-INTERNATIONAL EDITION
(2023)
Article
Biochemistry & Molecular Biology
Asta Luciunaite, Indre Dalgediene, Emilija Vasiliunaite, Milda Norkiene, Indre Kucinskaite-Kodze, Aurelija Zvirbliene, Alma Gedvilaite
Summary: Polyomaviruses are common in humans and animals, and some of them may have potential zoonotic transmission. This study investigated the immunogenic properties of VP1 virus-like particles derived from human polyomaviruses (HPyVs). The results showed that these VP1 particles are highly immunogenic and have antigenic similarities among different polyomaviruses. The study also revealed the interaction between VP1 particles and phagocytes. This research provides important insights into the study of polyomavirus biology and its interaction with the host immune system using VP1 particles.
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES
(2023)
Article
Chemistry, Multidisciplinary
Adele Gabba, Riem Attariya, Sandra Behren, Christian Pett, Joost C. van der Horst, Hajime Yurugi, Jin Yu, Moritz Urschbach, Juan Sabin, Gabriel Birrane, Edgar Schmitt, Sandra J. van Vliet, Pol Besenius, Ulrika Westerlind, Paul V. Murphy
Summary: The expression and glycosylation patterns of mucin on cancer cells differ from healthy cells, making them attractive targets for immunotherapy. In this study, a modular tripartite vaccine targeting macrophage galactose-type lectin (MGL) on antigen presenting cells was prepared using solid phase peptide synthesis. The vaccine induced a higher antibody response against tumor-associated carbohydrate antigens (TACAs) compared to TACAs alone, highlighting its potential as an anticancer vaccine.
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY
(2023)
Article
Chemistry, Applied
Gyu Hwan Hyun, In Ho Cho, Yoon Young Yang, Da-Hye Jeong, Yun Pyo Kang, You-Sun Kim, Seul Ji Lee, Sung Won Kwon
Summary: This study investigates the immunological action of complex pectin by studying its interaction with Toll-like receptors (TLRs). The research shows that pectic heteropolysaccharides (HPSs) derived from terrestrial plant cell walls can bind to TLR4 and activate the immune response. The findings provide a better understanding of the interaction between complex carbohydrates and proteins.
CARBOHYDRATE POLYMERS
(2023)
Article
Chemistry, Multidisciplinary
Srividya Swaminathan, Jebiti Haribabu, Naveen Kumar Kalagatur, Maroli Nikhil, Nithya Balakrishnan, Nattamai S. P. Bhuvanesh, Krishna Kadirvelu, Ponmalai Kolandaivel, Ramasamy Karvembu
Summary: The synthesis of fourteen new Ru-II-arene complexes were characterized and found to exhibit high toxicity towards IMR-32 cancer cells, with two complexes showing the highest activity and the ability to induce apoptosis and cell cycle arrest. These complexes also demonstrated good binding affinity with receptors commonly overexpressed in cancer cells.
CHEMISTRY-A EUROPEAN JOURNAL
(2021)
Article
Chemistry, Organic
Xuanjun Wu, Hunter McFall-Boegeman, Zahra Rashidijahanabad, Kunli Liu, Christian Pett, Jin Yu, Manuel Schorlemer, Sherif Ramadan, Sandra Behren, Ulrika Westerlind, Xuefei Huang
Summary: A synthetic MUC1-beta-Tf with enhanced stability was developed by altering the stereochemistry of the glycan/peptide linkage, leading to high levels of IgG antibodies in clinically relevant human MUC1 transgenic mice and recognizing MUC1 expressing tumor cells. This suggests a potential strategy for anti-cancer vaccine epitope design for glycopeptides.
ORGANIC & BIOMOLECULAR CHEMISTRY
(2021)
Article
Chemistry, Analytical
Bochen Ma, Yang Xu, Xuanze Meng, Zhanfang Ma, Hongliang Han
Summary: Introducing catalytic hydrogel sensing interface can improve the sensitivity and electron transfer efficiency of electrochemical immunosensors, leading to accelerated oxidation reaction and significant current response. This study combined a special hydrogel and catalytic polyoxometalate precursor solution to establish a novel immunosensor for detecting carbohydrate antigens, showing promising application prospects in the field of immunosensors.
SENSORS AND ACTUATORS B-CHEMICAL
(2021)
Article
Biochemistry & Molecular Biology
Rosario Serrano, Isabel Martinez-Argudo, Miguel Fernandez-Sanchez, Pedro J. Pacheco-Linan, Ivan Bravo, Boiko Cohen, Raul Calero, Maria Jose Ruiz
Summary: Titanium-based therapies have shown promise as a treatment for cancer patients, especially those with cisplatin resistant tumors. A newly synthesized titanium complex demonstrated improved stability in water and strong interaction with human serum albumin, showing potential anti-tumor effects.
JOURNAL OF INORGANIC BIOCHEMISTRY
(2021)
Article
Chemistry, Medicinal
Monika Absolonova, Lucie Melounkova, Jaromir Vinklarek, Jan Honzicek, Libor Dostal, Ondrej Mrozek
Summary: Cytotoxic complexes containing molybdenum are studied as potential alternatives to commercial drugs, with different ligands having a significant impact on cytotoxicity. Functionalization of the Cp ring in Mo complexes can improve cytotoxicity against cancer cells, suggesting a potential strategy for designing highly efficient cytotoxic drugs in the future.
Article
Oncology
Katarzyna Supruniuk, Robert Czarnomysy, Anna Muszynska, Iwona Radziejewska
Summary: The membrane-bound MUC1 mucin is overexpressed and aberrantly glycosylated in many epithelium origin cancers. One of the promising strategies in cancer therapy is combining monoclonal antibodies against cancer related antigens, like MUC1, with chemotherapeutics. In the study, the combined therapy of anti-MUC1/cisplatin and pyrazole-platinum(II) complexes PtPz4, PtPz6 showed promising potential as an anti-colon cancer therapy.
TRANSLATIONAL ONCOLOGY
(2022)
Review
Oncology
Duoli Xie, Zhuqian Wang, Jie Li, De-an Guo, Aiping Lu, Chao Liang
Summary: Osteosarcoma is an aggressive bone cancer with unknown molecular pathways, making it difficult to improve patient survival. Conventional therapies have severe side effects due to the lack of selectivity for malignant tissue. Researchers are exploring targeted treatment methods by combining specific ligands and chemotherapeutic agents to treat tumor cells.
FRONTIERS IN ONCOLOGY
(2022)
Review
Biochemistry & Molecular Biology
Hua-Zhen Duan, Zhen-Ke Nie, Yue Li, Yong-Xiang Chen
CURRENT OPINION IN CHEMICAL BIOLOGY
(2020)
Article
Biochemistry & Molecular Biology
Peng-Cheng Zhu, Yong-Xiang Chen
Summary: The study aimed to synthesize K-Ras4B HVR peptide containing both selenocysteine and farnesylated cysteine for traceless protein semi-synthesis. By developing a cost-effective method to produce Boc-Sec)2-OH and synthesizing K-Ras4B HVR peptide containing selenocystine, the compatibility of farnesylation reaction at the N-terminal selenocysteine and C-terminal cysteine was successfully tested.
PROTEIN AND PEPTIDE LETTERS
(2021)
Article
Chemistry, Medicinal
Tamas Yelland, Esther Garcia, Charles Parry, Dominika Kowalczyk, Marta Wojnowska, Andrea Gohlke, Matja Zalar, Kenneth Cameron, Gillian Goodwin, Qing Yu, Peng-Cheng Zhu, Yasmin ElMaghloob, Angelo Pugliese, Lewis Archibald, Andrew Jamieson, Yong Xiang Chen, Duncan McArthur, Justin Bower, Shehab Ismail
Summary: This study presents a novel strategy for targeting RAS by stabilizing its interaction with PDE6D and disrupting its localization. By using designed RAS point mutations, the RAS:PDE6D complex is stabilized, leading to inhibition of oncogenic RAS/ERIC signaling. Additionally, the impact of this strategy appears to be cell-type-dependent.
JOURNAL OF MEDICINAL CHEMISTRY
(2022)
Article
Chemistry, Multidisciplinary
Rong Chang, Yang-Jia Liu, Yun-Lai Zhang, Shi-Ying Zhang, Bei-Bei Han, Feng Chen, Yong-Xiang Chen
Summary: Biomimetic mineralization based on self-assembly has achieved significant progress in the construction of new organic-inorganic hybrid materials. A new type of biocompatible peptide scaffold has been developed, inspired by the cooperative effects of key components in biomineralization microenvironments, which can facilitate mineralization processes and prevent hydrolysis. These findings hold potential biomedical applications in hard tissue repair.
Review
Chemistry, Multidisciplinary
Yue Li, Rong Chang, Yong-Xiang Chen
Summary: In this article, the classic PPM approaches and recent progresses are summarized and categorized into five sections, including various reactions on different functional groups of polypeptides. Furthermore, the applications of structure-diversified polypeptides in the field of biomaterial are highlighted.
CHEMISTRY-AN ASIAN JOURNAL
(2022)
Article
Chemistry, Multidisciplinary
Jun-Jun Wu, Fang-Yuan Chen, Bei-Bei Han, Hong-Qing Zhang, Lang Zhao, Zhe-Rui Zhang, Juan-Juan Li, Bo-Dou Zhang, Ya-Nan Zhang, Yu-Xin Yue, Hong-Guo Hu, Wen-Hao Li, Bo Zhang, Yong-Xiang Chen, Dong-Sheng Guo, Yan-Mei Li
Summary: This study introduces a supramolecular cytosolic delivery system, CASTING, based on calixarene recognition, to improve the drugability of STING agonists. The results demonstrate that CASTING enhances the immunostimulatory potency of CDG and shows superior adjuvant activity on SARS-CoV-2 vaccines.
Article
Chemistry, Multidisciplinary
Rong Chang, Jia-Lin Chen, Guan-Yi Zhang, Yue Li, Hua-Zhen Duan, Shi-Zhong Luo, Yong-Xiang Chen
Summary: This study develops a novel low-fouling biomaterial based on intrinsically disordered proteins (IDPs) inspired by liquid-liquid phase separation. The IDPFUS-coated surfaces show excellent performance in resisting adsorption and adhesion of proteins, cells, platelets, and bacteria, as well as mitigating the host's foreign body response.
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY
(2022)
Article
Chemistry, Multidisciplinary
Hua-Zhen Duan, Cheng Hu, Yue-Lin Li, Shi-Hao Wang, Yan Xia, Xiaohong Liu, Jiangyun Wang, Yong-Xiang Chen
Summary: This study presents a method to genetically incorporate borane-protected phosphine into proteins, followed by a straightforward one-pot strategy for deboronation and palladium coordination. The genetically encoded phosphine ligand P3BF is expected to greatly expand our ability to design functional metalloproteins.
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY
(2022)
Article
Biotechnology & Applied Microbiology
Dong Liu, Yingying Liu, Hua-Zhen Duan, Xinjie Chen, Yanan Wang, Ting Wang, Qing Yu, Yong-Xiang Chen, Yuan Lu
Summary: This study customized the cell-free protein synthesis machinery and successfully synthesized phosphoproteins with site-specific phosphorylated amino acids, laying the foundation for developing a highly expansible CFPS platform and streamlining the production of user-defined phosphoproteins.
SYNTHETIC AND SYSTEMS BIOTECHNOLOGY
(2023)
Article
Chemistry, Multidisciplinary
Gao Li, Jun Hu, Huai Chen, Yong-Xiang Chen, Yan-Mei Li
Summary: By utilizing the interactions between tryptophan, methyl viologen, and cucurbit[8]uril, the study found that the distance between the targeted peptides/protein and the reactive peptide was shortened, facilitating the Michael addition reaction between cysteine and dehydroalanine. The system showed the highest acceleration on cysteines with suitable pK(a) and spatial location to tryptophan, suggesting potential for regioselective cysteine modification.
CHEMICAL COMMUNICATIONS
(2021)
Article
Chemistry, Multidisciplinary
Jun Hu, Xue-Meng Sun, Jing-Yun Su, Yu-Fen Zhao, Yong-Xiang Chen
Summary: The study explores the effects and molecular mechanisms of protein posttranslational modifications on protein-protein interactions, revealing that phosphorylated residues and farnesylated residues have different enhancing effects on protein interactions. Different PTM patterns are proposed to affect the binding process through distinct mechanisms.
Article
Chemistry, Multidisciplinary
Jun-Jun Wu, Lang Zhao, Bei-Bei Han, Hong-Guo Hu, Bo-Dou Zhang, Wen-Hao Li, Yong-Xiang Chen, Yan-Mei Li
Summary: The novel STING agonist CDGSF modified with phosphorothioate and fluorine exhibited potent antitumor effects and enhanced immune responses when used as an adjuvant in the SARS-CoV-2 vaccine, showcasing potential therapeutic and preventive applications.
CHEMICAL COMMUNICATIONS
(2021)
Article
Chemistry, Physical
Yun-Lai Zhang, Rong Chang, Hua-Zhen Duan, Yong-Xiang Chen
Article
Chemistry, Multidisciplinary
Bei-Bei Han, Yu-Chen Pan, Yan-Mei Li, Dong-Sheng Guo, Yong-Xiang Chen
CHEMICAL COMMUNICATIONS
(2020)
Article
Chemistry, Multidisciplinary
Qian-Qian Li, Yu-Qing Liu, Yun-Yi Luo, Ting-Ting Chu, Na Gao, Pu-Guang Chen, Yong-Xiang Chen, Yan-Mei Li
CHEMICAL COMMUNICATIONS
(2020)