Genomic prediction enables early but low-intensity selection in soybean segregating progenies

Exploring the performance of genomic prediction models for soybean yield using different validation approaches

(2019) Vuk Đorđević et al.   MOLECULAR BREEDING

Accuracy of genomic selection to predict maize single-crosses obtained through different mating designs

(2018) Roberto Fristche-Neto et al.   THEORETICAL AND APPLIED GENETICS

Genomic selection in soybean: accuracy and time gain in relation to phenotypic selection

(2018) Gilvani Matei et al.   MOLECULAR BREEDING

Population structure, genetic relatedness and linkage disequilibrium blocks in cultivars of tropical soybean (Glycine max)

(2017) Rodrigo Iván Contreras-Soto et al.   EUPHYTICA

Assessing the expected response to genomic selection of individuals and families in Eucalyptus breeding with an additive-dominant model

(2017) R T Resende et al.   HEREDITY

Genomic-Enabled Prediction in Maize Using Kernel Models with Genotype × Environment Interaction

(2017) Massaine Bandeira e Souza et al.   G3-Genes Genomes Genetics

Is the $1000 Genome as Near as We Think? A Cost Analysis of Next-Generation Sequencing

(2016) Kirsten J.M. van Nimwegen et al.   CLINICAL CHEMISTRY

Modeling Genotype × Environment Interaction for Genomic Selection with Unbalanced Data from a Wheat Breeding Program

(2016) Bettina Lado et al.   CROP SCIENCE

Genomic-assisted phylogenetic analysis and marker development for next generation soybean cyst nematode resistance breeding

(2016) Suhas Kadam et al.   PLANT SCIENCE

Genomic-assisted haplotype analysis and the development of high-throughput SNP markers for salinity tolerance in soybean

(2016) Gunvant Patil et al.   Scientific Reports

Genomic Bayesian Prediction Model for Count Data with Genotype × Environment Interaction

(2016) Abelardo Montesinos-López et al.   G3-Genes Genomes Genetics

Prospects of Genomic Prediction in the USDA Soybean Germplasm Collection: Historical Data Creates Robust Models for Enhancing Selection of Accessions

(2016) Diego Jarquin et al.   G3-Genes Genomes Genetics

Genomic Prediction of Genotype × Environment Interaction Kernel Regression Models

(2016) Jaime Cuevas et al.   Plant Genome

Adding Genetically Distant Individuals to Training Populations Reduces Genomic Prediction Accuracy in Barley

(2015) Aaron J. Lorenz et al.   CROP SCIENCE

Comparison of methods used to identify superior individuals in genomic selection in plant breeding

(2015) L.L. Bhering et al.   GENETICS AND MOLECULAR RESEARCH

Ion Torrent sequencing as a tool for mutation discovery in the flax (Linum usitatissimum L.) genome

(2015) Leonardo Galindo-González et al.   Plant Methods

A Ranking Approach to Genomic Selection

(2015) Mathieu Blondel et al.   PLoS One

Genome-wide association study, genomic prediction and marker-assisted selection for seed weight in soybean (Glycine max)

(2015) Jiaoping Zhang et al.   THEORETICAL AND APPLIED GENETICS

Accuracy and responses of genomic selection on key traits in apple breeding

(2015) Hélène Muranty et al.   Horticulture Research

Genotyping by sequencing for genomic prediction in a soybean breeding population

(2014) Diego Jarquín et al.   BMC GENOMICS

Genome-Wide Regression and Prediction with the BGLR Statistical Package

(2014) P. Perez et al.   GENETICS

Genotyping-in-Thousands by sequencing (GT-seq): A cost effective SNP genotyping method based on custom amplicon sequencing

(2014) Nathan R. Campbell et al.   Molecular Ecology Resources

TASSEL-GBS: A High Capacity Genotyping by Sequencing Analysis Pipeline

(2014) Jeffrey C. Glaubitz et al.   PLoS One

Training set optimization under population structure in genomic selection

(2014) Julio Isidro et al.   THEORETICAL AND APPLIED GENETICS

synbreed: a framework for the analysis of genomic prediction data using R

(2012) Valentin Wimmer et al.   BIOINFORMATICS

Genomic Prediction of Breeding Values when Modeling Genotype × Environment Interaction using Pedigree and Dense Molecular Markers

(2012) Juan Burgueño et al.   CROP SCIENCE

Genomic Selection using Multiple Populations

(2012) T. Schulz-Streeck et al.   CROP SCIENCE

Genomic selection in plant breeding: from theory to practice

(2011) J.-L. Jannink et al.   Briefings in Functional Genomics

A Robust, Simple Genotyping-by-Sequencing (GBS) Approach for High Diversity Species

(2011) Robert J. Elshire et al.   PLoS One

Prediction of Genetic Values of Quantitative Traits in Plant Breeding Using Pedigree and Molecular Markers

(2010) J. Crossa et al.   GENETICS

Genomic Similarity and Kernel Methods I: Advancements by Building on Mathematical and Statistical Foundations

(2010) Daniel J. Schaid   HUMAN HEREDITY

Genome sequence of the palaeopolyploid soybean

(2010) Jeremy Schmutz et al.   NATURE

Resequencing of 31 wild and cultivated soybean genomes identifies patterns of genetic diversity and selection

(2010) Hon-Ming Lam et al.   NATURE GENETICS

Factors Affecting Accuracy From Genomic Selection in Populations Derived From Multiple Inbred Lines: A Barley Case Study

(2009) S. Zhong et al.   GENETICS

Reliability of Genomic Predictions Across Multiple Populations

(2009) A. P. W. de Roos et al.   GENETICS