FAME: fast and memory efficient multiple sequences alignment tool through compatible chain of roots

VCSRA: A fast and accurate multiple sequence alignment algorithm with a high degree of parallelism

(2018) Dong Dong et al.   Journal of Genetics and Genomics

Clustal Omega for making accurate alignments of many protein sequences

(2017) Fabian Sievers et al.   PROTEIN SCIENCE

MSAProbs-MPI: parallel multiple sequence aligner for distributed-memory systems: Table 1.

(2016) Jorge González-Domínguez et al.   BIOINFORMATICS

FAMSA: Fast and accurate multiple sequence alignment of huge protein families

(2016) Sebastian Deorowicz et al.   Scientific Reports

HAlign: Fast multiple similar DNA/RNA sequence alignment based on the centre star strategy

(2015) Quan Zou et al.   BIOINFORMATICS

Comparison of mapping algorithms used in high-throughput sequencing: application to Ion Torrent data

(2014) Ségolène Caboche et al.   BMC GENOMICS

Fast, scalable generation of high-quality protein multiple sequence alignments using Clustal Omega

(2011) F. Sievers et al.   Molecular Systems Biology