Taxonomy of prokaryotic viruses: 2018-2019 update from the ICTV Bacterial and Archaeal Viruses Subcommittee

ICTV Virus Taxonomy Profile: Spiraviridae

(2020) David Prangishvili et al.   JOURNAL OF GENERAL VIROLOGY

Expansion of known ssRNA phage genomes: From tens to over a thousand

(2020) J. Callanan et al.   Science Advances

Classifying the Unclassified: A Phage Classification Method

(2019) Cynthia Maria Chibani et al.   Viruses-Basel

ML-DSP: Machine Learning with Digital Signal Processing for ultrafast, accurate, and scalable genome classification at all taxonomic levels

(2019) Gurjit S. Randhawa et al.   BMC GENOMICS

Taxonomic assignment of uncultivated prokaryotic virus genomes is enabled by gene-sharing networks

(2019) Ho Bin Jang et al.   NATURE BIOTECHNOLOGY

Analysis of Spounaviruses as a Case Study for the Overdue Reclassification of Tailed Phages

(2019) Jakub Barylski et al.   SYSTEMATIC BIOLOGY

Evaluation of a concatenated protein phylogeny for classification of tailed double-stranded DNA viruses belonging to the order Caudovirales

(2019) Soo Jen Low et al.   Nature Microbiology

Spindle-shaped viruses infect marine ammonia-oxidizing thaumarchaea

(2019) Jong-Geol Kim et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The Human Gut Virome Is Highly Diverse, Stable, and Individual Specific

(2019) Andrey N. Shkoporov et al.   Cell Host & Microbe

Single-Stranded DNA Viruses in Antarctic Cryoconite Holes

(2019) Pacifica Sommers et al.   Viruses-Basel

Binomial nomenclature for virus species: a consultation

(2019) Stuart G. Siddell et al.   ARCHIVES OF VIROLOGY

Taxonomy of prokaryotic viruses: 2017 update from the ICTV Bacterial and Archaeal Viruses Subcommittee

(2018) Evelien M. Adriaenssens et al.   ARCHIVES OF VIROLOGY

ICTV Virus Taxonomy Profile: Guttaviridae

(2018) David Prangishvili et al.   JOURNAL OF GENERAL VIROLOGY

ICTV Virus Taxonomy Profile: Ampullaviridae

(2018) David Prangishvili et al.   JOURNAL OF GENERAL VIROLOGY

ICTV Virus Taxonomy Profile: Plasmaviridae

(2018) Mart Krupovic et al.   JOURNAL OF GENERAL VIROLOGY

ICTV Virus Taxonomy Profile: Bicaudaviridae

(2018) David Prangishvili et al.   JOURNAL OF GENERAL VIROLOGY

Vast diversity of prokaryotic virus genomes encoding double jelly-roll major capsid proteins uncovered by genomic and metagenomic sequence analysis

(2018) Natalya Yutin et al.   Virology Journal

The genomic underpinnings of eukaryotic virus taxonomy: creating a sequence-based framework for family-level virus classification

(2018) Pakorn Aiewsakun et al.   Microbiome

ICTV Virus Taxonomy Profile: Globuloviridae

(2018) David Prangishvili et al.   JOURNAL OF GENERAL VIROLOGY

RNA Phage Biology in a Metagenomic Era

(2018) Julie Callanan et al.   Viruses-Basel

Unprecedented Diversity of ssDNA Phages from the Family Microviridae Detected within the Gut of a Protochordate Model Organism (Ciona robusta)

(2018) Alexandria Creasy et al.   Viruses-Basel

ICTV Virus Taxonomy Profile: Tristromaviridae

(2018) David Prangishvili et al.   JOURNAL OF GENERAL VIROLOGY

Viral Diversity and Its Relationship With Environmental Factors at the Surface and Deep Sea of Prydz Bay, Antarctica

(2018) Zheng Gong et al.   Frontiers in Microbiology

Virus found in a boreal lake links ssDNA and dsDNA viruses

(2017) Elina Laanto et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Implementation of Objective PASC-Derived Taxon Demarcation Criteria for Official Classification of Filoviruses

(2017) Yīmíng Bào et al.   Viruses-Basel

vConTACT: an iVirus tool to classify double-stranded DNA viruses that infect Archaea and Bacteria

(2017) Benjamin Bolduc et al.   PeerJ

Taxonomy of prokaryotic viruses: update from the ICTV bacterial and archaeal viruses subcommittee

(2016) Mart Krupovic et al.   ARCHIVES OF VIROLOGY

Ecogenomics and potential biogeochemical impacts of globally abundant ocean viruses

(2016) Simon Roux et al.   NATURE

Uncovering Earth’s virome

(2016) David Paez-Espino et al.   NATURE

Hyperexpansion of RNA Bacteriophage Diversity

(2016) Siddharth R. Krishnamurthy et al.   PLOS BIOLOGY

Structure and diversity of ssDNA Microviridae viruses in two peri-alpine lakes (Annecy and Bourget, France)

(2015) Xu Zhong et al.   RESEARCH IN MICROBIOLOGY

Diversity and comparative genomics of Microviridae in Sphagnum- dominated peatlands

(2015) Achim Quaiser et al.   Frontiers in Microbiology

SDT: A Virus Classification Tool Based on Pairwise Sequence Alignment and Identity Calculation

(2014) Brejnev Muhizi Muhire et al.   PLoS One

Unification of the Globally Distributed Spindle-Shaped Viruses of the Archaea

(2013) M. Krupovic et al.   JOURNAL OF VIROLOGY

Modified coat protein forms the flexible spindle-shaped virion of haloarchaeal virus His1

(2012) Maija K. Pietilä et al.   ENVIRONMENTAL MICROBIOLOGY

Archaeal virus with exceptional virion architecture and the largest single-stranded DNA genome

(2012) T. Mochizuki et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The SPO1-related bacteriophages

(2010) Jochen Klumpp et al.   ARCHIVES OF VIROLOGY

A low-polynomial algorithm for assembling clusters of orthologous groups from intergenomic symmetric best matches

(2010) David M. Kristensen et al.   BIOINFORMATICS

Unifying classical and molecular taxonomic classification: analysis of the Podoviridae using BLASTP-based tools

(2008) Rob Lavigne et al.   RESEARCH IN MICROBIOLOGY