Effects of Tilmicosin Treatment on the Nasopharyngeal Microbiota of Feedlot Cattle With Respiratory Disease During the First Week of Clinical Recovery

Contribution of the Mucosal Microbiota to Bovine Respiratory Health

(2019) Mohamed Zeineldin et al.   TRENDS IN MICROBIOLOGY

Antimicrobial Effects on Swine Gastrointestinal Microbiota and Their Accompanying Antibiotic Resistome

(2019) Mohamed Zeineldin et al.   Frontiers in Microbiology

Microbial shifts in the swine nasal microbiota in response to parenteral antimicrobial administration

(2018) Mohamed Zeineldin et al.   MICROBIAL PATHOGENESIS

Dysbiosis of the fecal microbiota in feedlot cattle with hemorrhagic diarrhea

(2018) Mohamed Zeineldin et al.   MICROBIAL PATHOGENESIS

Injectable antimicrobials in commercial feedlot cattle and their effect on the nasopharyngeal microbiota and antimicrobial resistance

(2018) Devin B. Holman et al.   VETERINARY MICROBIOLOGY

Deciphering upper respiratory tract microbiota complexity in healthy calves and calves that develop respiratory disease using shotgun metagenomics

(2017) Natália C. Gaeta et al.   JOURNAL OF DAIRY SCIENCE

Effects of nasal instillation of a nitric oxide-releasing solution or parenteral administration of tilmicosin on the nasopharyngeal microbiota of beef feedlot cattle at high-risk of developing respiratory tract disease

(2017) E. Timsit et al.   RESEARCH IN VETERINARY SCIENCE

Disparity in the nasopharyngeal microbiota between healthy cattle on feed, at entry processing and with respiratory disease

(2017) Mohamed Zeineldin et al.   VETERINARY MICROBIOLOGY

Weaned beef calves fed selenium-biofortified alfalfa hay have an enriched nasal microbiota compared with healthy controls

(2017) Jean A. Hall et al.   PLoS One

The nasopharyngeal microbiota of feedlot cattle that develop bovine respiratory disease

(2015) Devin B. Holman et al.   VETERINARY MICROBIOLOGY

Analysis of the Upper Respiratory Tract Microbiotas as the Source of the Lung and Gastric Microbiotas in Healthy Individuals

(2015) Christine M. Bassis et al.   mBio

Evaluation of the nasal microbiota in slaughter-age pigs and the impact on nasal methicillin-resistant Staphylococcus aureus (MRSA) carriage

(2014) J Weese et al.   BMC Veterinary Research

Characterization of the nasopharyngeal microbiota in health and during rhinovirus challenge

(2014) E Allen et al.   Microbiome

Pathogens of Bovine Respiratory Disease in North American Feedlots Conferring Multidrug Resistance via Integrative Conjugative Elements

(2013) C. L. Klima et al.   JOURNAL OF CLINICAL MICROBIOLOGY

Quality-filtering vastly improves diversity estimates from Illumina amplicon sequencing

(2012) Nicholas A Bokulich et al.   NATURE METHODS

Antibiotics, microbiota, and immune defense

(2012) Carles Ubeda et al.   TRENDS IN IMMUNOLOGY

Seasonal Variations in Clostridium difficile Infections Are Associated with Influenza and Respiratory Syncytial Virus Activity Independently of Antibiotic Prescriptions: a Time Series Analysis in Québec, Canada

(2011) Rodica Gilca et al.   ANTIMICROBIAL AGENTS AND CHEMOTHERAPY

UCHIME improves sensitivity and speed of chimera detection

(2011) Robert C. Edgar et al.   BIOINFORMATICS

Genetic basis of antibiotic resistance in pathogenic Acinetobacter species

(2011) Laurent Poirel et al.   IUBMB LIFE

Unravelling the effects of the environment and host genotype on the gut microbiome

(2011) Aymé Spor et al.   NATURE REVIEWS MICROBIOLOGY

Search and clustering orders of magnitude faster than BLAST

(2010) Robert C. Edgar   BIOINFORMATICS

High Prevalence of Macrolide Resistance inMycoplasma pneumoniaeIsolates from Adult and Adolescent Patients with Respiratory Tract Infection in China

(2010) Bin Cao et al.   CLINICAL INFECTIOUS DISEASES

QIIME allows analysis of high-throughput community sequencing data

(2010) J Gregory Caporaso et al.   NATURE METHODS

Short-Term Antibiotic Treatment Has Differing Long-Term Impacts on the Human Throat and Gut Microbiome

(2010) Hedvig E. Jakobsson et al.   PLoS One

Bacterial Pathogens of the Bovine Respiratory Disease Complex

(2010) Dee Griffin et al.   VETERINARY CLINICS OF NORTH AMERICA-FOOD ANIMAL PRACTICE

Transportation of young beef bulls alters circulating physiological parameters that may be effective biomarkers of stress1

(2008) K. R. Buckham Sporer et al.   JOURNAL OF ANIMAL SCIENCE