标题
Phylogenomics provides robust support for a two-domains tree of life
作者
关键词
-
出版物
Nature Ecology & Evolution
Volume 4, Issue 1, Pages 138-147
出版商
Springer Science and Business Media LLC
发表日期
2019-12-10
DOI
10.1038/s41559-019-1040-x
参考文献
相关参考文献
注意：仅列出部分参考文献，下载原文获取全部文献信息。- Proposal of the reverse flow model for the origin of the eukaryotic cell based on comparative analyses of Asgard archaeal metabolism
- (2019) Anja Spang et al. Nature Microbiology
- GHOST: Recovering Historical Signal from Heterotachously-evolved Sequence Alignments
- (2019) Stephen M Crotty et al. SYSTEMATIC BIOLOGY
- Major New Microbial Groups Expand Diversity and Alter our Understanding of the Tree of Life
- (2018) Cindy J. Castelle et al. CELL
- Asgard archaea are the closest prokaryotic relatives of eukaryotes
- (2018) Anja Spang et al. PLoS Genetics
- Asgard archaea do not close the debate about the universal tree of life topology
- (2018) Violette Da Cunha et al. PLoS Genetics
- Complex Evolutionary History of Translation Elongation Factor 2 and Diphthamide Biosynthesis in Archaea and Parabasalids
- (2018) Adrienne B Narrowe et al. Genome Biology and Evolution
- Long-branch attraction in species tree estimation: inconsistency of partitioned likelihood and topology-based summary methods
- (2018) Sebastien Roch et al. SYSTEMATIC BIOLOGY
- Integrated genomic and fossil evidence illuminates life’s early evolution and eukaryote origin
- (2018) Holly C. Betts et al. Nature Ecology & Evolution
- The Effect of Nonreversibility on Inferring Rooted Phylogenies
- (2017) Svetlana Cherlin et al. MOLECULAR BIOLOGY AND EVOLUTION
- UFBoot2: Improving the Ultrafast Bootstrap Approximation
- (2017) Diep Thi Hoang et al. MOLECULAR BIOLOGY AND EVOLUTION
- Asgard archaea illuminate the origin of eukaryotic cellular complexity
- (2017) Katarzyna Zaremba-Niedzwiedzka et al. NATURE
- Archaea and the origin of eukaryotes
- (2017) Laura Eme et al. NATURE REVIEWS MICROBIOLOGY
- Integrative modeling of gene and genome evolution roots the archaeal tree of life
- (2017) Tom A. Williams et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Lokiarchaea are close relatives of Euryarchaeota, not bridging the gap between prokaryotes and eukaryotes
- (2017) Violette Da Cunha et al. PLoS Genetics
- Recovery of nearly 8,000 metagenome-assembled genomes substantially expands the tree of life
- (2017) Donovan H. Parks et al. Nature Microbiology
- Phylogenetic rooting using minimal ancestor deviation
- (2017) Fernando Domingues Kümmel Tria et al. Nature Ecology & Evolution
- Standardized benchmarking in the quest for orthologs
- (2016) Adrian M Altenhoff et al. NATURE METHODS
- Arguments Reinforcing the Three-Domain View of Diversified Cellular Life
- (2016) Arshan Nasir et al. ARCHAEA-AN INTERNATIONAL MICROBIOLOGICAL JOURNAL
- A new view of the tree of life
- (2016) Laura A. Hug et al. Nature Microbiology
- Complex archaea that bridge the gap between prokaryotes and eukaryotes
- (2015) Anja Spang et al. NATURE
- Changing ideas about eukaryotic origins
- (2015) Tom A. Williams et al. PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES
- Rooting the tree of life: the phylogenetic jury is still out
- (2015) Richard Gouy et al. PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES
- New substitution models for rooting phylogenetic trees
- (2015) Tom A. Williams et al. PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES
- Endosymbiotic theories for eukaryote origin
- (2015) William F. Martin et al. PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES
- The two-domain tree of life is linked to a new root for the Archaea
- (2015) Kasie Raymann et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- A Nonstationary Markov Model Detects Directional Evolution in Hymenopteran Morphology
- (2015) Seraina Klopfstein et al. SYSTEMATIC BIOLOGY
- Likelihood-based tree reconstruction on a concatenation of aligned sequence data sets can be statistically inconsistent
- (2015) Sebastien Roch et al. THEORETICAL POPULATION BIOLOGY
- Implementing and testing Bayesian and maximum-likelihood supertree methods in phylogenetics
- (2015) Wasiu A. Akanni et al. Royal Society Open Science
- RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies
- (2014) Alexandros Stamatakis BIOINFORMATICS
- Archaeal “Dark Matter” and the Origin of Eukaryotes
- (2014) Tom A. Williams et al. Genome Biology and Evolution
- IQ-TREE: A Fast and Effective Stochastic Algorithm for Estimating Maximum-Likelihood Phylogenies
- (2014) Lam-Tung Nguyen et al. MOLECULAR BIOLOGY AND EVOLUTION
- The hybrid nature of the Eukaryota and a consilient view of life on Earth
- (2014) James O. McInerney et al. NATURE REVIEWS MICROBIOLOGY
- Early evolution of the Eukaryota
- (2014) Nicholas J. Butterfield PALAEONTOLOGY
- Paleobiological Perspectives on Early Eukaryotic Evolution
- (2014) A. H. Knoll Cold Spring Harbor Perspectives in Biology
- From archaeon to eukaryote: the evolutionary dark ages of the eukaryotic cell
- (2013) Joran Martijn et al. BIOCHEMICAL SOCIETY TRANSACTIONS
- MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability
- (2013) K. Katoh et al. MOLECULAR BIOLOGY AND EVOLUTION
- An archaeal origin of eukaryotes supports only two primary domains of life
- (2013) Tom A. Williams et al. NATURE
- Efficient Exploration of the Space of Reconciled Gene Trees
- (2013) Gergely J. Szöllősi et al. SYSTEMATIC BIOLOGY
- PhyloBayes MPI: Phylogenetic Reconstruction with Infinite Mixtures of Profiles in a Parallel Environment
- (2013) Nicolas Lartillot et al. SYSTEMATIC BIOLOGY
- A congruent phylogenomic signal places eukaryotes within the Archaea
- (2012) T. A. Williams et al. PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES
- Estimating the timing of early eukaryotic diversification with multigene molecular clocks
- (2011) L. W. Parfrey et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- The archaeal ‘TACK’ superphylum and the origin of eukaryotes
- (2011) Lionel Guy et al. TRENDS IN MICROBIOLOGY
- Accelerated Profile HMM Searches
- (2011) Sean R. Eddy PLoS Computational Biology
- BMGE (Block Mapping and Gathering with Entropy): a new software for selection of phylogenetic informative regions from multiple sequence alignments
- (2010) Alexis Criscuolo et al. BMC EVOLUTIONARY BIOLOGY
- Rooting the Ribosomal Tree of Life
- (2010) G. P. Fournier et al. MOLECULAR BIOLOGY AND EVOLUTION
- New Algorithms and Methods to Estimate Maximum-Likelihood Phylogenies: Assessing the Performance of PhyML 3.0
- (2010) Stéphane Guindon et al. SYSTEMATIC BIOLOGY
- A Dirichlet Process Covarion Mixture Model and Its Assessments Using Posterior Predictive Discrepancy Tests
- (2009) Yan Zhou et al. MOLECULAR BIOLOGY AND EVOLUTION
- The primary divisions of life: a phylogenomic approach employing composition-heterogeneous methods
- (2009) P. G. Foster et al. PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES
- Genome beginnings: rooting the tree of life
- (2009) J. A. Lake et al. PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES
- Spatial and Temporal Heterogeneity in Nucleotide Sequence Evolution
- (2008) S. Whelan MOLECULAR BIOLOGY AND EVOLUTION
- An Improved General Amino Acid Replacement Matrix
- (2008) S. Q. Le et al. MOLECULAR BIOLOGY AND EVOLUTION
- The archaebacterial origin of eukaryotes
- (2008) C. J. Cox et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Maximum Likelihood Supertrees
- (2008) Mike Steel et al. SYSTEMATIC BIOLOGY
Find the ideal target journal for your manuscript
Explore over 38,000 international journals covering a vast array of academic fields.
SearchAdd your recorded webinar
Do you already have a recorded webinar? Grow your audience and get more views by easily listing your recording on Peeref.
Upload Now