Revisiting the hypothesis of an energetic barrier to genome complexity between eukaryotes and prokaryotes

Response to Martin and colleagues: mitochondria do not boost the bioenergetic capacity of eukaryotic cells

(2018) Michael Lynch et al.   Biology Direct

Serial endosymbiosis or singular event at the origin of eukaryotes?

(2017) Nick Lane   JOURNAL OF THEORETICAL BIOLOGY

Symbiogenesis, gradualism, and mitochondrial energy in eukaryote origin

(2017) William Martin   PERIODICUM BIOLOGORUM

Membranes, energetics, and evolution across the prokaryote-eukaryote divide

(2017) Michael Lynch et al.   eLife

Exosomes in mammals with greater habitat variability contain more proteins and RNAs

(2017) Kazuhiro Takemoto et al.   Royal Society Open Science

MEGA7: Molecular Evolutionary Genetics Analysis Version 7.0 for Bigger Datasets

(2016) Sudhir Kumar et al.   MOLECULAR BIOLOGY AND EVOLUTION

Reply to Lane and Martin: Mitochondria do not boost the bioenergetic capacity of eukaryotic cells

(2016) Michael Lynch et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Mitochondria, complexity, and evolutionary deficit spending

(2016) Nick Lane et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

A Model of Genome Size Evolution for Prokaryotes in Stable and Fluctuating Environments

(2015) Piotr Bentkowski et al.   Genome Biology and Evolution

KEGG as a reference resource for gene and protein annotation

(2015) Minoru Kanehisa et al.   NUCLEIC ACIDS RESEARCH

Energetics and population genetics at the root of eukaryotic cellular and genomic complexity

(2015) Eugene V. Koonin   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The bioenergetic costs of a gene

(2015) Michael Lynch et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Eukaryogenesis, how special really?

(2015) Austin Booth et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The proportion of genes in a functional category is linked to mass-specific metabolic rate and lifespan

(2015) Kazuhiro Takemoto et al.   Scientific Reports

Functional Classification of Uncultured “Candidatus Caldiarchaeum subterraneum” Using the Maple System

(2015) Hideto Takami et al.   PLoS One

Bioenergetic Constraints on the Evolution of Complex Life

(2014) N. Lane   Cold Spring Harbor Perspectives in Biology

Growth Temperature and Genome Size in Bacteria Are Negatively Correlated, Suggesting Genomic Streamlining During Thermal Adaptation

(2013) Niv Sabath et al.   Genome Biology and Evolution

Experimental evolution of multicellularity

(2012) W. C. Ratcliff et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

A general and simple method for obtainingR2from generalized linear mixed-effects models

(2012) Shinichi Nakagawa et al.   Methods in Ecology and Evolution

Energetics and genetics across the prokaryote-eukaryote divide

(2011) Nick Lane   Biology Direct

Phylogenetic signal in predator–prey body-size relationships

(2011) Russell E. Naisbit et al.   ECOLOGY

Ploidy in cyanobacteria

(2011) Marco Griese et al.   FEMS MICROBIOLOGY LETTERS

Quantification of Ploidy in Proteobacteria Revealed the Existence of Monoploid, (Mero-)Oligoploid and Polyploid Species

(2011) Vito Pecoraro et al.   PLoS One

The energetics of genome complexity

(2010) Nick Lane et al.   NATURE

Phylogenetic Logistic Regression for Binary Dependent Variables

(2009) Anthony R. Ives et al.   SYSTEMATIC BIOLOGY

Mean mass-specific metabolic rates are strikingly similar across life's major domains: Evidence for life's metabolic optimum

(2008) A. M. Makarieva et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Extreme polyploidy in a large bacterium

(2008) J. E. Mendell et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA