Comprehensive phylogenomic analysis of ERF genes in sorghum provides clues to the evolution of gene functions and redundancy among gene family members

The expanding roles of APETALA2/Ethylene Responsive Factors and their potential applications in crop improvement

(2019) Rajat Srivastava et al.   Briefings in Functional Genomics

Sweet sorghum-a promising alternative feedstock for biofuel production

(2018) Rouf Ahmad Dar et al.   RENEWABLE & SUSTAINABLE ENERGY REVIEWS

Different Modes of Gene Duplication Show Divergent Evolutionary Patterns and Contribute Differently to the Expansion of Gene Families Involved in Important Fruit Traits in Pear (Pyrus bretschneideri)

(2018) Xin Qiao et al.   Frontiers in Plant Science

Natural Variation in OsLG3 Increases Drought Tolerance in Rice by Inducing ROS Scavenging

(2018) Haiyan Xiong et al.   PLANT PHYSIOLOGY

Constitutive expression of a stabilized transcription factor ERFVII enhances waterlogging tolerance in wheat without penalizing grain yield

(2018) Xuening Wei et al.   PLANT CELL AND ENVIRONMENT

Overexpression of OsERF48 causes regulation of OsCML16 , a calmodulin-like protein gene that enhances root growth and drought tolerance

(2017) Harin Jung et al.   PLANT BIOTECHNOLOGY JOURNAL

The Sorghum bicolor reference genome: improved assembly, gene annotations, a transcriptome atlas, and signatures of genome organization

(2017) Ryan F. McCormick et al.   PLANT JOURNAL

JcDREB2, a Physic Nut AP2/ERF Gene, Alters Plant Growth and Salinity Stress Responses in Transgenic Rice

(2017) Yuehui Tang et al.   Frontiers in Plant Science

Regulation of Apetala2/Ethylene Response Factors in Plants

(2017) Ujjal J. Phukan et al.   Frontiers in Plant Science

Multiple regulatory roles of AP2/ERF transcription factor in angiosperm

(2017) Chao Gu et al.   Botanical Studies

The Potato ERF Transcription Factor StERF3 Negatively Regulates Resistance to Phytophthora infestans and Salt Tolerance in Potato

(2015) Zhendong Tian et al.   PLANT AND CELL PHYSIOLOGY

Evolution of cis-regulatory elements and regulatory networks in duplicated genes of Arabidopsis thaliana

(2015) Andrej A Arsovski et al.   PLANT PHYSIOLOGY

Phylogenomics databases for facilitating functional genomics in rice

(2015) Ki-Hong Jung et al.   Rice

PTGBase: an integrated database to study tandem duplicated genes in plants

(2015) Jingyin Yu et al.   Database-The Journal of Biological Databases and Curation

Ethylene responsive factors in the orchestration of stress responses in monocotyledonous plants

(2015) Sanjukta Dey et al.   Frontiers in Plant Science

Overexpression of an AP2/ERF Type Transcription Factor OsEREBP1 Confers Biotic and Abiotic Stress Tolerance in Rice

(2015) V. Jisha et al.   PLoS One

Introns and gene expression: Cellular constraints, transcriptional regulation, and evolutionary consequences

(2014) Patricia Heyn et al.   BIOESSAYS

GSDS 2.0: an upgraded gene feature visualization server

(2014) Bo Hu et al.   BIOINFORMATICS

Transcriptomic analysis of Sorghum bicolor responding to combined heat and drought stress

(2014) Stephanie M Johnson et al.   BMC GENOMICS

Association of polyalanine and polyglutamine coiled coils mediates expansion disease-related protein aggregation and dysfunction

(2014) Ilaria Pelassa et al.   HUMAN MOLECULAR GENETICS

InParanoid 8: orthology analysis between 273 proteomes, mostly eukaryotic

(2014) Erik L.L. Sonnhammer et al.   NUCLEIC ACIDS RESEARCH

A genome-wide analysis of the ERF gene family in sorghum

(2013) H.W. Yan et al.   GENETICS AND MOLECULAR RESEARCH

MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability

(2013) K. Katoh et al.   MOLECULAR BIOLOGY AND EVOLUTION

MEGA6: Molecular Evolutionary Genetics Analysis Version 6.0

(2013) Koichiro Tamura et al.   MOLECULAR BIOLOGY AND EVOLUTION

APETALA2/Ethylene Responsive Factor (AP2/ERF) transcription factors: mediators of stress responses and developmental programs

(2013) Francesco Licausi et al.   NEW PHYTOLOGIST

Alternative Splicing at the Intersection of Biological Timing, Development, and Stress Responses

(2013) D. Staiger et al.   PLANT CELL

Characterization of two tomato AP2/ERF genes, SlCRF1 and SlCRF2 in hormone and stress responses

(2013) Xiuling Shi et al.   PLANT CELL REPORTS

OsDREB2A, a Rice Transcription Factor, Significantly Affects Salt Tolerance in Transgenic Soybean

(2013) Xiu-xiang Zhang et al.   PLoS One

Evolution and function of CAG/polyglutamine repeats in protein–protein interaction networks

(2012) Martin H. Schaefer et al.   NUCLEIC ACIDS RESEARCH

Comparative transcriptomics of three Poaceae species reveals patterns of gene expression evolution

(2012) Rebecca M. Davidson et al.   PLANT JOURNAL

Both plant and animal LEA proteins act as kinetic stabilisers of polyglutamine-dependent protein aggregation

(2011) Yun Liu et al.   FEBS LETTERS

Functions and Application of the AP2/ERF Transcription Factor Family in Crop ImprovementF

(2011) Zhao-Shi Xu et al.   Journal of Integrative Plant Biology

Oxygen sensing in plants is mediated by an N-end rule pathway for protein destabilization

(2011) Francesco Licausi et al.   NATURE

Homeostatic response to hypoxia is regulated by the N-end rule pathway in plants

(2011) Daniel J. Gibbs et al.   NATURE

HMMER web server: interactive sequence similarity searching

(2011) R. D. Finn et al.   NUCLEIC ACIDS RESEARCH

The auxin responsive AP2/ERF transcription factor CROWN ROOTLESS5 is involved in crown root initiation in rice through the induction of OsRR1, a type-A response regulator of cytokinin signaling

(2011) Yuka Kitomi et al.   PLANT JOURNAL

An ethylene response factor OsWR1 responsive to drought stress transcriptionally activates wax synthesis related genes and increases wax production in rice

(2011) Youhua Wang et al.   PLANT MOLECULAR BIOLOGY

Rice Ethylene-Response AP2/ERF Factor OsEATB Restricts Internode Elongation by Down-Regulating a Gibberellin Biosynthetic Gene

(2011) Weiwei Qi et al.   PLANT PHYSIOLOGY

Arabidopsis DREB2C functions as a transcriptional activator of HsfA3 during the heat stress response

(2010) Huan Chen et al.   BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS

Transgenic expression of sorghum DREB2 in rice improves tolerance and yield under water limitation

(2010) P. BIHANI et al.   JOURNAL OF AGRICULTURAL SCIENCE

Comprehensive analysis of rice DREB2-type genes that encode transcription factors involved in the expression of abiotic stress-responsive genes

(2010) Satoko Matsukura et al.   MOLECULAR GENETICS AND GENOMICS

Circos: An information aesthetic for comparative genomics

(2009) M. Krzywinski et al.   GENOME RESEARCH

The ethylene response factors SNORKEL1 and SNORKEL2 allow rice to adapt to deep water

(2009) Yoko Hattori et al.   NATURE

Ectopic AtCBF1 over-expression enhances freezing tolerance and induces cold acclimation-associated physiological modifications in potato

(2008) MARÍA-TERESA PINO et al.   PLANT CELL AND ENVIRONMENT

Regulating the Regulators: The Future Prospects for Transcription-Factor-Based Agricultural Biotechnology Products

(2008) K. Century et al.   PLANT PHYSIOLOGY

Barley grain with adhering hulls is controlled by an ERF family transcription factor gene regulating a lipid biosynthesis pathway

(2008) S. Taketa et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Rapidly regulated genes are intron poor

(2008) Daniel C. Jeffares et al.   TRENDS IN GENETICS