Evaluation of Machine Learning Models for Predicting Antimicrobial Resistance of Actinobacillus pleuropneumoniae From Whole Genome Sequences

Application of machine learning techniques to tuberculosis drug resistance analysis

(2018) Samaneh Kouchaki et al.   BIOINFORMATICS

Predicting bacterial resistance from whole-genome sequences using k-mers and stability selection

(2018) Pierre Mahé et al.   BMC BIOINFORMATICS

Pharmacokinetic/Pharmacodynamic Integration to Evaluate the Changes in Susceptibility of Actinobacillus pleuropneumoniae After Repeated Administration of Danofloxacin

(2018) Longfei Zhang et al.   Frontiers in Microbiology

Phenetic Comparison of Prokaryotic Genomes Using k-mers

(2017) Maxime Déraspe et al.   MOLECULAR BIOLOGY AND EVOLUTION

Whole Genome Sequencing for Surveillance of Antimicrobial Resistance in Actinobacillus pleuropneumoniae

(2017) Janine T. Bossé et al.   Frontiers in Microbiology

Predictive computational phenotyping and biomarker discovery using reference-free genome comparisons

(2016) Alexandre Drouin et al.   BMC GENOMICS

Benchmarking of methods for identification of antimicrobial resistance genes in bacterial whole genome data

(2016) Philip T. L. C. Clausen et al.   JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY

Using Support Vector Machine (SVM) for Classification of Selectivity of H1N1 Neuraminidase Inhibitors

(2016) Yang Li et al.   Molecular Informatics

Molecular serotyping and antimicrobial resistance profiles ofActinobacillus pleuropneumoniaeisolated from pigs in South Korea

(2016) Boram Kim et al.   VETERINARY QUARTERLY

Evaluation of Machine Learning and Rules-Based Approaches for Predicting Antimicrobial Resistance Profiles in Gram-negative Bacilli from Whole Genome Sequence Data

(2016) Mitchell W. Pesesky et al.   Frontiers in Microbiology

Improved annotation of antibiotic resistance determinants reveals microbial resistomes cluster by ecology

(2014) Molly K Gibson et al.   ISME Journal

The Comprehensive Antibiotic Resistance Database

(2013) Andrew G. McArthur et al.   ANTIMICROBIAL AGENTS AND CHEMOTHERAPY

Prediction of protein-protein interactions between viruses and human by an SVM model

(2012) Guangyu Cui et al.   BMC BIOINFORMATICS

Identification of acquired antimicrobial resistance genes

(2012) E. Zankari et al.   JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY

Molecular characterization of enrofloxacin resistant Actinobacillus pleuropneumoniae isolates

(2009) Yu-Chih Wang et al.   VETERINARY MICROBIOLOGY

Velvet: Algorithms for de novo short read assembly using de Bruijn graphs

(2008) D. R. Zerbino et al.   GENOME RESEARCH