The role of spatial structure in the evolution of viral innate immunity evasion: A diffusion-reaction cellular automaton model

Social evolution of innate immunity evasion in a virus

(2019) Pilar Domingo-Calap et al.   Nature Microbiology

Drivers of Spatial Structure in Social Microbial Communities

(2019) David Yanni et al.   CURRENT BIOLOGY

Genetic bottlenecks in intraspecies virus transmission

(2018) John T McCrone et al.   Current Opinion in Virology

CRISPR-based herd immunity can limit phage epidemics in bacterial populations

(2018) Pavel Payne et al.   eLife

A Positive Feedback Amplifier Circuit That Regulates Interferon (IFN)-Stimulated Gene Expression and Controls Type I and Type II IFN Responses

(2018) Agata Michalska et al.   Frontiers in Immunology

A Tunable Diffusion-Consumption Mechanism of Cytokine Propagation Enables Plasticity in Cell-to-Cell Communication in the Immune System

(2017) Alon Oyler-Yaniv et al.   IMMUNITY

Systematic identification of anti-interferon function on hepatitis C virus genome reveals p7 as an immune evasion protein

(2017) Hangfei Qi et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Mechanisms of viral mutation

(2016) Rafael Sanjuán et al.   CELLULAR AND MOLECULAR LIFE SCIENCES

Spatial-Temporal Patterns of Viral Amplification and Interference Initiated by a Single Infected Cell

(2016) Fulya Akpinar et al.   JOURNAL OF VIROLOGY

Spatial structure, cooperation and competition in biofilms

(2016) Carey D. Nadell et al.   NATURE REVIEWS MICROBIOLOGY

Rapid induction and persistence of paracrine-induced cellular antiviral states arrest viral infection spread in A549 cells

(2016) Emily A. Voigt et al.   VIROLOGY

Kinetic Differences and Synergistic Antiviral Effects Between Type I and Type III Interferon Signaling Indicate Pathway Independence

(2015) Emily A. Voigt et al.   JOURNAL OF INTERFERON AND CYTOKINE RESEARCH

How is the effectiveness of immune surveillance impacted by the spatial distribution of spreading infections?

(2015) Ulrich D. Kadolsky et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Early IFN type I response: Learning from microbial evasion strategies

(2015) Eliana M. Coccia et al.   SEMINARS IN IMMUNOLOGY

How Obstacles Perturb Population Fronts and Alter Their Genetic Structure

(2015) Wolfram Möbius et al.   PLoS Computational Biology

No Love Lost Between Viruses and Interferons

(2015) Volker Fensterl et al.   Annual Review of Virology

Matters of Size: Genetic Bottlenecks in Virus Infection and Their Potential Impact on Evolution

(2015) Mark P. Zwart et al.   Annual Review of Virology

Hamilton's rule and the causes of social evolution

(2014) A. F. G. Bourke   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Cohabitation reaction–diffusion model for virus focal infections

(2014) Daniel R. Amor et al.   PHYSICA A-STATISTICAL MECHANICS AND ITS APPLICATIONS

Can Non-lytic CD8+ T Cells Drive HIV-1 Escape?

(2013) Nafisa-Katrin Seich al Basatena et al.   PLoS Pathogens

Spatial self-organization favors heterotypic cooperation over cheating

(2013) Babak Momeni et al.   eLife

HIV-infected T cells are migratory vehicles for viral dissemination

(2012) Thomas T. Murooka et al.   NATURE

Stability and inactivation of vesicular stomatitis virus, a prototype rhabdovirus

(2012) Bettina Zimmer et al.   VETERINARY MICROBIOLOGY

Virus population bottlenecks during within-host progression and host-to-host transmission

(2012) Serafín Gutiérrez et al.   Current Opinion in Virology

Complex Spatial Dynamics of Oncolytic Viruses In Vitro: Mathematical and Experimental Approaches

(2012) Dominik Wodarz et al.   PLoS Computational Biology

Complexes of Vesicular Stomatitis Virus Matrix Protein with Host Rae1 and Nup98 Involved in Inhibition of Host Transcription

(2012) Karishma R. Rajani et al.   PLoS Pathogens

The genetical theory of kin selection

(2011) A. GARDNER et al.   JOURNAL OF EVOLUTIONARY BIOLOGY

Persistence of bacteria and phages in a chemostat

(2011) Hal L. Smith et al.   JOURNAL OF MATHEMATICAL BIOLOGY

Understanding microbial cooperation

(2011) James A. Damore et al.   JOURNAL OF THEORETICAL BIOLOGY

Severe Hindrance of Viral Infection Propagation in Spatially Extended Hosts

(2011) José A. Capitán et al.   PLoS One

Effect of different modes of viral spread on the dynamics of multiply infected cells in human immunodeficiency virus infection

(2010) D. Wodarz et al.   Journal of the Royal Society Interface

Repulsion of Superinfecting Virions: A Mechanism for Rapid Virus Spread

(2010) V. Doceul et al.   SCIENCE

The Length of Vesicular Stomatitis Virus Particles Dictates a Need for Actin Assembly during Clathrin-Dependent Endocytosis

(2010) David K. Cureton et al.   PLoS Pathogens

Evolutionary dynamics in structured populations

(2009) M. A. Nowak et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

A simple and general explanation for the evolution of altruism

(2008) J. A Fletcher et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES