Multi-scale imaging and analysis identify pan-embryo cell dynamics of germlayer formation in zebrafish

Single-cell reconstruction of developmental trajectories during zebrafish embryogenesis

(2018) Jeffrey A. Farrell et al.   SCIENCE

Single-cell mapping of gene expression landscapes and lineage in the zebrafish embryo

(2018) Daniel E. Wagner et al.   SCIENCE

Global morphogenetic flow is accurately predicted by the spatial distribution of myosin motors

(2018) Sebastian J Streichan et al.   eLife

In Toto Imaging and Reconstruction of Post-Implantation Mouse Development at the Single-Cell Level

(2018) Katie McDole et al.   CELL

Adaptive particle representation of fluorescence microscopy images

(2018) Bevan L. Cheeseman et al.   Nature Communications

A guide to light-sheet fluorescence microscopy for multiscale imaging

(2017) Rory M Power et al.   NATURE METHODS

The visualizations transforming biology

(2016) Ewen Callaway   NATURE

Cortical Contractility Triggers a Stochastic Switch to Fast Amoeboid Cell Motility

(2015) Verena Ruprecht et al.   CELL

Fast, accurate reconstruction of cell lineages from large-scale fluorescence microscopy data

(2014) Fernando Amat et al.   NATURE METHODS

High-speed panoramic light-sheet microscopy reveals global endodermal cell dynamics

(2013) Benjamin Schmid et al.   Nature Communications

Non-directional radial intercalation dominates deep cell behavior during zebrafish epiboly

(2013) R. Bensch et al.   Biology Open

Clarifying tetrapod embryogenesis by a dorso-ventral analysis of the tissue flows during early stages of chicken development

(2012) Vincent Fleury   BIOSYSTEMS

Bone Regenerates via Dedifferentiation of Osteoblasts in the Zebrafish Fin

(2011) Franziska Knopf et al.   DEVELOPMENTAL CELL

Force-Directed Edge Bundling for Graph Visualization

(2009) Danny Holten et al.   COMPUTER GRAPHICS FORUM

Enzymatic assembly of DNA molecules up to several hundred kilobases

(2009) Daniel G Gibson et al.   NATURE METHODS

Live Analysis of Endodermal Layer Formation Identifies Random Walk as a Novel Gastrulation Movement

(2008) Guillaume Pézeron et al.   CURRENT BIOLOGY

Sdf1/Cxcr4 signaling controls the dorsal migration of endodermal cells during zebrafish gastrulation

(2008) T. Mizoguchi et al.   DEVELOPMENT

Quantitative differences in tissue surface tension influence zebrafish germ layer positioning

(2008) Eva‐Maria Schötz et al.   HFSP Journal

Cooperation of polarized cell intercalations drives convergence and extension of presomitic mesoderm during zebrafish gastrulation

(2008) Chunyue Yin et al.   JOURNAL OF CELL BIOLOGY

Tensile forces govern germ-layer organization in zebrafish

(2008) M. Krieg et al.   NATURE CELL BIOLOGY

Dynamic Analyses of Drosophila Gastrulation Provide Insights into Collective Cell Migration

(2008) A. McMahon et al.   SCIENCE

Reconstruction of Zebrafish Early Embryonic Development by Scanned Light Sheet Microscopy

(2008) P. J. Keller et al.   SCIENCE