4.7 Article

Image Reconstruction: From Sparsity to Data-Adaptive Methods and Machine Learning

期刊

PROCEEDINGS OF THE IEEE
卷 108, 期 1, 页码 86-109

出版社

IEEE-INST ELECTRICAL ELECTRONICS ENGINEERS INC
DOI: 10.1109/JPROC.2019.2936204

关键词

Image reconstruction; Computed tomography; Mathematical model; Magnetic resonance imaging; Machine learning; X-ray imaging; Data models; Compressed sensing (CS); deep learning; dictionary learning (DL); efficient algorithms; image reconstruction; machine learning; magnetic resonance imaging (MRI); multilayer models; nonconvex optimization; positron emission tomography (PET); single-photon emission computed tomography (SPECT); sparse and low-rank models; structured models; transform learning; X-ray computed tomography (CT)

资金

  1. National Research Foundation of Korea [2016R1A2B3008104]
  2. National Institutes of Health (NIH) [R01 CA214981, R01 EB023618, U01 EB018753, U01 EB026977]
  3. National Research Foundation of Korea [2016R1A2B3008104] Funding Source: Korea Institute of Science & Technology Information (KISTI), National Science & Technology Information Service (NTIS)

向作者/读者索取更多资源

The field of medical image reconstruction has seen roughly four types of methods. The first type tended to be analytical methods, such as filtered backprojection (FBP) for X-ray computed tomography (CT) and the inverse Fourier transform for magnetic resonance imaging (MRI), based on simple mathematical models for the imaging systems. These methods are typically fast, but have suboptimal properties such as poor resolution-noise tradeoff for CT. A second type is iterative reconstruction methods based on more complete models for the imaging system physics and, where appropriate, models for the sensor statistics. These iterative methods improved image quality by reducing noise and artifacts. The U.S. Food and Drug Administration (FDA)-approved methods among these have been based on relatively simple regularization models. A third type of methods has been designed to accommodate modified data acquisition methods, such as reduced sampling in MRI and CT to reduce scan time or radiation dose. These methods typically involve mathematical image models involving assumptions such as sparsity or low rank. A fourth type of methods replaces mathematically designed models of signals and systems with data-driven or adaptive models inspired by the field of machine learning. This article focuses on the two most recent trends in medical image reconstruction: methods based on sparsity or low-rank models and data-driven methods based on machine learning techniques.

作者

我是这篇论文的作者
点击您的名字以认领此论文并将其添加到您的个人资料中。

评论

主要评分

4.7
评分不足

次要评分

新颖性
-
重要性
-
科学严谨性
-
评价这篇论文

推荐

Editorial Material Engineering, Electrical & Electronic

Physics-Driven Machine Learning for Computational Imaging

Bihan Wen, Saiprasad Ravishankar, Zhizhen Zhao, Raja Giryes, Jong Chul Ye

Summary: In recent years, there has been a growing interest in next-generation imaging systems and their combination with machine learning. Model-based imaging schemes, which incorporate physics-based forward models, noise models, and image priors, have laid the foundation in the emerging field of computational sensing and imaging. However, recent advances in machine learning techniques, such as large-scale optimization and deep neural networks, are increasingly being applied to improve the effectiveness and efficiency of computational imaging systems, leading to the redefinition of state-of-the-art computational imaging algorithms.

IEEE SIGNAL PROCESSING MAGAZINE (2023)

Article Engineering, Electrical & Electronic

Generative Models for Inverse Imaging Problems: From mathematical foundations to physics-driven applications

Zhizhen Zhao, Jong Chul Ye, Yoram Bresler

Summary: Physics-informed generative modeling is a rapidly growing field in computational imaging, with various methods and applications. This review focuses on generative modeling techniques, such as variational autoencoders (VAEs) and generative adversarial networks (GANs), and recent advancements in score-based generative models. Through different imaging applications, the review demonstrates how these generative modeling techniques effectively incorporate the physics of the imaging problem to solve inverse problems.

IEEE SIGNAL PROCESSING MAGAZINE (2023)

Article Engineering, Electrical & Electronic

Efficient Approximation of Jacobian Matrices Involving a Non-Uniform Fast Fourier Transform (NUFFT)

Guanhua Wang, Jeffrey A. Fessler

Summary: This paper presents an efficient and accurate method for computing approximate gradients involving NUFFTs, which improves the accuracy and efficiency of non-Cartesian MRI sampling trajectory learning. The proposed approach enables sampling optimization for larger image sizes and leads to improved image quality. It also shows that model-based image reconstruction methods can perform nearly as well as CNN-based methods when suitably optimized.

IEEE TRANSACTIONS ON COMPUTATIONAL IMAGING (2023)

Article Engineering, Electrical & Electronic

Sparse-View Cone Beam CT Reconstruction Using Data-Consistent Supervised and Adversarial Learning From Scarce Training Data

Anish Lahiri, Gabriel Maliakal, Marc L. Klasky, Jeffrey A. Fessler, Saiprasad Ravishankar

Summary: This work focuses on image reconstruction when both the number of available CT projections and the training data is extremely limited. A sequential reconstruction approach is adopted, using an adversarially trained shallow network for 'destreaking' followed by a data-consistency update in each stage. To address the challenge of limited data, image subvolumes are used for training and patch aggregation during testing. To handle the computational challenge of 3D reconstruction, a hybrid 3D-to-2D mapping network is used for the 'destreaking' part. Comparisons with other methods indicate the potential of the proposed method in scenarios with highly limited projections and training data.

IEEE TRANSACTIONS ON COMPUTATIONAL IMAGING (2023)

Article Radiology, Nuclear Medicine & Medical Imaging

Training End-to-End Unrolled Iterative Neural Networks for SPECT Image Reconstruction

Zongyu Li, Yuni K. Dewaraja, Jeffrey A. Fessler

Summary: This article introduces an end-to-end unrolled iterative neural network training method for single-photon emission computerized tomography (SPECT) image reconstruction, which requires a memory-efficient forward-backward projector. The authors present an open-source Julia implementation of this projector, which uses only a fraction of the memory compared to a MATLAB-based projector. The study compares the performance of the proposed training method with other approaches using various phantoms and demonstrates that the end-to-end training with the Julia projector achieves the best reconstruction quality.

IEEE TRANSACTIONS ON RADIATION AND PLASMA MEDICAL SCIENCES (2023)

Editorial Material Engineering, Electrical & Electronic

Physics-Driven Machine Learning for Computational Imaging: Part 2

Bihan Wen, Saiprasad Ravishankar, Zhizhen Zhao, Raja Giryes, Jong Chul Ye

Summary: The March issue of the IEEE Signal Processing Magazine focuses on the second volume of the special issue on physics-driven machine learning for computational imaging. This issue includes nine articles out of the 47 submissions that were accepted.

IEEE SIGNAL PROCESSING MAGAZINE (2023)

Article Computer Science, Interdisciplinary Applications

MR Image Denoising and Super-Resolution Using Regularized Reverse Diffusion

Hyungjin Chung, Eun Sun Lee, Jong Chul Ye

Summary: We propose a new denoising method based on score-based reverse diffusion sampling, which outperforms traditional MMSE denoisers in terms of both image quality and adaptability to real-world situations.

IEEE TRANSACTIONS ON MEDICAL IMAGING (2023)

Article Computer Science, Artificial Intelligence

Momentum-Net: Fast and Convergent Iterative Neural Network for Inverse Problems

Il Yong Chun, Zhengyu Huang, Hongki Lim, Jeffrey A. Fessler

Summary: Iterative neural networks (INN) are gaining attention for solving inverse problems in imaging, combining regression NNs and an iterative model-based image reconstruction (MBIR) algorithm. This paper proposes the first fast and convergent INN architecture, Momentum-Net, by generalizing a block-wise MBIR algorithm using momentum and majorizers with regression NNs. Momentum-Net guarantees convergence to a fixed-point for general differentiable (non)convex MBIR functions and convex feasible sets, under two asymptomatic conditions.

IEEE TRANSACTIONS ON PATTERN ANALYSIS AND MACHINE INTELLIGENCE (2023)

Article Radiology, Nuclear Medicine & Medical Imaging

Stochastic optimization of three-dimensional non-Cartesian sampling trajectory

Guanhua Wang, Jon-Fredrik Nielsen, Jeffrey A. Fessler, Douglas C. Noll

Summary: This study proposes a generalized framework for optimizing 3D non-Cartesian sampling patterns via data-driven optimization. The method can optimize multiple properties of sampling patterns simultaneously and can be used with either model-based or learning-based reconstruction methods.

MAGNETIC RESONANCE IN MEDICINE (2023)

Article Computer Science, Interdisciplinary Applications

Multi-Task Distributed Learning Using Vision Transformer With Random Patch Permutation

Sangjoon Park, Jong Chul Ye

Summary: The widespread application of artificial intelligence in health research is currently limited by data availability. To overcome this limitation, distributed learning methods such as federated learning (FL) and split learning (SL) are introduced, each with their own strengths and weaknesses in addressing data management and ownership issues. However, a recent proposal called federated split task-agnostic (F eSTA) learning suffers from high communication overhead. To address this, a new method called ${p}$ -F eSTA is presented, which uses ViT with random patch permutation and achieves improved multi-task learning performance without sacrificing privacy.

IEEE TRANSACTIONS ON MEDICAL IMAGING (2023)

Article Computer Science, Interdisciplinary Applications

Physics-Guided Deep Scatter Estimation by Weak Supervision for Quantitative SPECT

Hanvit Kim, Zongyu Li, Jiye Son, Jeffrey A. Fessler, Yuni K. Dewaraja, Se Young Chun

Summary: This article proposes a physics-guided weakly supervised training framework for fast and accurate scatter estimation in quantitative SPECT. The method utilizes a 100 x shorter MC simulation as weak labels and enhances them with deep neural networks, achieving comparable performance to the supervised counterpart while significantly reducing the computation in labeling.

IEEE TRANSACTIONS ON MEDICAL IMAGING (2023)

Article Computer Science, Artificial Intelligence

Deep learning based on parameterized physical forward model for adaptive holographic imaging with unpaired data

Chanseok Lee, Gookho Song, Hyeonggeon Kim, Jong Chul Ye, Mooseok Jang

Summary: Reconstructing holographic images is difficult due to the ill posed inverse mapping problem. However, Lee and colleagues propose a deep learning method that incorporates a physical model and can handle physical perturbations in holographic image reconstruction, making it more reliable and applicable to a wider range of imaging problems.

NATURE MACHINE INTELLIGENCE (2023)

Article Computer Science, Artificial Intelligence

Self-supervised multi-modal training from uncurated images and reports enables monitoring AI in radiology

Sangjoon Park, Eun Sun Lee, Kyung Sook Shin, Jeong Eun Lee, Jong Chul Ye

Summary: The increasing demand for AI systems to monitor human errors and abnormalities in healthcare presents challenges. This study presents a model called Medical X-VL, which is tailored for the medical domain and outperformed current state-of-the-art models in two medical image datasets. The model enables various zero-shot tasks for monitoring AI in the medical domain.

MEDICAL IMAGE ANALYSIS (2024)

Article Engineering, Electrical & Electronic

SPECT Reconstruction With a Trained RegularizerUsing CT-Side Information: Application to177LuSPECT Imaging

Hongki Lim, Yuni K. Dewaraja, Jeffrey A. Fessler

Summary: This study introduces a trained regularizer for SPECT reconstruction using CT imaging, which improves the imaging effect of low-count SPECT by incorporating CT-side information. Experimental results show that this method outperforms conventional methods in activity quantification, noise reduction, and root mean square error.

IEEE TRANSACTIONS ON COMPUTATIONAL IMAGING (2023)

Article Computer Science, Artificial Intelligence

One-Shot Adaptation of GAN in Just One CLIP

Gihyun Kwon, Jong Chul Ye

Summary: In this paper, a novel single-shot GAN adaptation method is proposed through unified CLIP space manipulations to address the overfitting or under-fitting issues when fine-tuning with a single target image. Experimental results demonstrate that the proposed method outperforms baseline models in generating diverse outputs with the target texture and allows more effective attribute editing.

IEEE TRANSACTIONS ON PATTERN ANALYSIS AND MACHINE INTELLIGENCE (2023)

暂无数据