Shedding light on response of Triticum aestivum cv. Kharchia Local roots to long-term salinity stress through transcriptome profiling

Full-length transcript sequencing and comparative transcriptomic analysis to evaluate the contribution of osmotic and ionic stress components towards salinity tolerance in the roots of cultivated alfalfa (Medicago sativa L.)

(2019) Dong Luo et al.   BMC PLANT BIOLOGY

Genome-scale identification, classification, and tissue specific expression analysis of late embryogenesis abundant (LEA) genes under abiotic stress conditions in Sorghum bicolor L.

(2019) M. Nagaraju et al.   PLoS One

The Role of the Late Embryogenesis-Abundant (LEA) Protein Family in Development and the Abiotic Stress Response: A Comprehensive Expression Analysis of Potato (Solanum Tuberosum)

(2019) Yongkun Chen et al.   Genes

Genetic sources for the development of salt tolerance in crops

(2019) Stanislav V. Isayenkov   PLANT GROWTH REGULATION

Gene Expression analysis associated with salt stress in a reciprocally crossed rice population

(2019) Samsad Razzaque et al.   Scientific Reports

Transcriptomic analysis of Aegilops tauschii during long-term salinity stress

(2018) Mehdi Mansouri et al.   FUNCTIONAL & INTEGRATIVE GENOMICS

Transcriptome analysis of grapevine under salinity and identification of key genes responsible for salt tolerance

(2018) Priyanka Das et al.   FUNCTIONAL & INTEGRATIVE GENOMICS

Overexpression of gene encoding the key enzyme involved in proline-biosynthesis (PuP5CS) to improve salt tolerance in switchgrass (Panicum virgatum L.)

(2018) Cong Guan et al.   PLANT CELL REPORTS

Overexpression of the wheat expansin gene TaEXPA2 improves oxidative stress tolerance in transgenic Arabidopsis plants

(2018) Yanhui Chen et al.   PLANT PHYSIOLOGY AND BIOCHEMISTRY

VvWRKY30 , a grape WRKY transcription factor, plays a positive regulatory role under salinity stress

(2018) Dan Zhu et al.   PLANT SCIENCE

A Novel WRKY Transcription Factor, MuWRKY3 (Macrotyloma uniflorum Lam. Verdc.) Enhances Drought Stress Tolerance in Transgenic Groundnut (Arachis hypogaea L.) Plants

(2018) Kurnool Kiranmai et al.   Frontiers in Plant Science

Glutathione S-Transferases: Role in Combating Abiotic Stresses Including Arsenic Detoxification in Plants

(2018) Smita Kumar et al.   Frontiers in Plant Science

Genome-Wide Identification and Expression Profiling Analysis of the Xyloglucan Endotransglucosylase/Hydrolase Gene Family in Tobacco (Nicotiana tabacum L.)

(2018) Meng Wang et al.   Genes

Comparative de novo transcriptomic profiling of the salinity stress responsiveness in contrasting pearl millet lines

(2018) Harshraj Shinde et al.   ENVIRONMENTAL AND EXPERIMENTAL BOTANY

Regulatory Mechanism of ABA and ABI3 on Vegetative Development in the Moss Physcomitrella patens

(2018) Mengkai Zhao et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Phosphatidylinositol-hydrolyzing phospholipase C4 modulates rice response to salt and drought

(2018) Xianjun Deng et al.   PLANT CELL AND ENVIRONMENT

Transcriptional profiling reveals that a MYB transcription factor MsMYB4 contributes to the salinity stress response of alfalfa

(2018) Wei Dong et al.   PLoS One

Overexpression of 9-cis-Epoxycarotenoid Dioxygenase Cisgene in Grapevine Increases Drought Tolerance and Results in Pleiotropic Effects

(2018) Rongrong He et al.   Frontiers in Plant Science

De novo transcriptome sequencing and analysis of genes related to salt stress response in Glehnia littoralis

(2018) Li Li et al.   PeerJ

Downstream components of the calmodulin signaling pathway in the rice salt stress response revealed by transcriptome profiling and target identification

(2018) Worawat Yuenyong et al.   BMC PLANT BIOLOGY

Integrated transcriptome, small RNA and degradome sequencing approaches provide insights into Ascochyta blight resistance in chickpea

(2018) Vanika Garg et al.   PLANT BIOTECHNOLOGY JOURNAL

H2O2 Signature and Innate Antioxidative Profile Make the Difference Between Sensitivity and Tolerance to Salt in Rice Cells

(2018) Elide Formentin et al.   Frontiers in Plant Science

Effect of salt-stress on gene expression in citrus roots revealed by RNA-seq

(2017) Rangjin Xie et al.   FUNCTIONAL & INTEGRATIVE GENOMICS

Regulation of Na+ and K+ homeostasis in plants: towards improved salt stress tolerance in crop plants

(2017) Diego M. Almeida et al.   GENETICS AND MOLECULAR BIOLOGY

A phosphoinositide-specific phospholipase C pathway elicits stress-induced Ca2+ signals and confers salt tolerance to rice

(2017) Li Li et al.   NEW PHYTOLOGIST

Transcriptome dynamics provide insights into long-term salinity stress tolerance in Triticum aestivum cv. Kharchia Local

(2017) Mahesh M. Mahajan et al.   PLANT PHYSIOLOGY AND BIOCHEMISTRY

Identification of Genes Involved in the Responses of Tangor (C. reticulata × C. sinensis) to Drought Stress

(2017) Jin-Ping Xiao et al.   Biomed Research International

Overexpression of Cucumber Phospholipase D alpha Gene (CsPLDα) in Tobacco Enhanced Salinity Stress Tolerance by Regulating Na+–K+ Balance and Lipid Peroxidation

(2017) Tuo Ji et al.   Frontiers in Plant Science

Isolation, Transformation and Overexpression of Sugarcane SoP5CS Gene for Drought Tolerance Improvement

(2017) Jian Li et al.   Sugar Tech

Over-expression of a NAC 67 transcription factor from finger millet (Eleusine coracana L.) confers tolerance against salinity and drought stress in rice

(2016) Hifzur Rahman et al.   BMC BIOTECHNOLOGY

Identification and characterization of CBL and CIPK gene families in eggplant (Solanum melongena L.)

(2016) Jing Li et al.   MOLECULAR GENETICS AND GENOMICS

Comparative transcriptome analysis of transcription factors in different maize varieties under salt stress conditions

(2016) Xilong Du et al.   PLANT GROWTH REGULATION

Identification and expression analysis of LEA gene family members in cucumber genome

(2016) Yasemin Celik Altunoglu et al.   PLANT GROWTH REGULATION

MID1plays an important role in response to drought stress during reproductive development

(2016) Changkui Guo et al.   PLANT JOURNAL

Plant phospholipases D and C and their diverse functions in stress responses

(2016) Yueyun Hong et al.   PROGRESS IN LIPID RESEARCH

Abscisic Acid and Abiotic Stress Tolerance in Crop Plants

(2016) Saroj K. Sah et al.   Frontiers in Plant Science

Transcriptome profiling of the salt-stress response in Triticum aestivum cv. Kharchia Local

(2016) Etika Goyal et al.   Scientific Reports

Proline: a key player in plant abiotic stress tolerance

(2015) G. Kaur et al.   BIOLOGIA PLANTARUM

Transcriptomic profiling of the salt-stress response in the halophyte Halogeton glomeratus

(2015) Juncheng Wang et al.   BMC GENOMICS

TaNAC29, a NAC transcription factor from wheat, enhances salt and drought tolerance in transgenic Arabidopsis

(2015) Quanjun Huang et al.   BMC PLANT BIOLOGY

HvEXPB7, a novel β-expansin gene revealed by the root hair transcriptome of Tibetan wild barley, improves root hair growth under drought stress

(2015) Xiaoyan He et al.   JOURNAL OF EXPERIMENTAL BOTANY

Roles of cell wall peroxidases in plant development

(2015) Edith Francoz et al.   PHYTOCHEMISTRY

MsZEP, a novel zeaxanthin epoxidase gene from alfalfa (Medicago sativa), confers drought and salt tolerance in transgenic tobacco

(2015) Zhiqiang Zhang et al.   PLANT CELL REPORTS

Group II late embryogenesis abundant (LEA) proteins: structural and functional aspects in plant abiotic stress

(2015) Aditya Banerjee et al.   PLANT GROWTH REGULATION

Transcriptome Analysis of Canola (Brassica napus) under Salt Stress at the Germination Stage

(2015) Weihua Long et al.   PLoS One

TaPP2C1, a Group F2 Protein Phosphatase 2C Gene, Confers Resistance to Salt Stress in Transgenic Tobacco

(2015) Wei Hu et al.   PLoS One

ROS Regulation During Abiotic Stress Responses in Crop Plants

(2015) Jun You et al.   Frontiers in Plant Science

Transcriptome Sequencing and Characterization of Japanese Scallop Patinopecten yessoensis from Different Shell Color Lines

(2015) Jun Ding et al.   PLoS One

HDG11 upregulates cell-wall-loosening protein genes to promote root elongation in Arabidopsis

(2014) Ping Xu et al.   JOURNAL OF EXPERIMENTAL BOTANY

Economics of salt-induced land degradation and restoration

(2014) M. Qadir et al.   NATURAL RESOURCES FORUM

Phytohormones and plant responses to salinity stress: a review

(2014) Shah Fahad et al.   PLANT GROWTH REGULATION

Overexpression of a wheat phospholipase D gene, TaPLDα, enhances tolerance to drought and osmotic stress in Arabidopsis thaliana

(2014) Junbin Wang et al.   PLANTA

EBSeq: an empirical Bayes hierarchical model for inference in RNA-seq experiments

(2013) Ning Leng et al.   BIOINFORMATICS

ZmWRKY33, a WRKY maize transcription factor conferring enhanced salt stress tolerances in Arabidopsis

(2013) Hua Li et al.   PLANT GROWTH REGULATION

MYB transcription factor genes as regulators for plant responses: an overview

(2013) Supriya Ambawat et al.   PHYSIOLOGY AND MOLECULAR BIOLOGY OF PLANTS

NGS QC Toolkit: A Toolkit for Quality Control of Next Generation Sequencing Data

(2012) Ravi K. Patel et al.   PLoS One

RSEM: accurate transcript quantification from RNA-Seq data with or without a reference genome

(2011) Bo Li et al.   BMC BIOINFORMATICS

Full-length transcriptome assembly from RNA-Seq data without a reference genome

(2011) Manfred G Grabherr et al.   NATURE BIOTECHNOLOGY

agriGO: a GO analysis toolkit for the agricultural community

(2010) Zhou Du et al.   NUCLEIC ACIDS RESEARCH

Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

(2009) Ben Langmead et al.   GENOME BIOLOGY

Functional characterization of Arabidopsis NaCl-inducible WRKY25 and WRKY33 transcription factors in abiotic stresses

(2008) Yuanqing Jiang et al.   PLANT MOLECULAR BIOLOGY